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The map label for this gene is yfbG [C]

Identifier: 86605202

GI number: 86605202

Start: 501723

End: 502670

Strand: Reverse

Name: yfbG [C]

Synonym: CYA_0484

Alternate gene names: 86605202

Gene position: 502670-501723 (Counterclockwise)

Preceding gene: 86605203

Following gene: 86605201

Centisome position: 17.14

GC content: 64.66

Gene sequence:

>948_bases
GTGAAGATCCTGGTTACGGGTGGTTTGGGGTTTATCGGCTCCCATCTGGTCAGCCGTCTGCTGCAGGAGGGCCACACGGT
GATCTGCCTCGACAACGGCTACACGGGGCGGGAGGAGAACCTGCAGGCCCACCGCAACAACCCTGCCTTGACCTTGCTGT
GGCACGACGTGGCCGAGCCGCTGCCGCCGGAGCTGGAGAAAGCTGGCATTGAGCAAATCTACCACCTGGCCTGTCCCGCC
TCGCCGCCCCACTACCAGGCGGATCCCATCCGCACCATCCGCACCGGCGTCTGGGGCACCTACCACCTGCTGGAGCTGGC
CCAGAAAACGGGGGCCAGGTTCCTGCTGGCCTCCACTTCAGAAGTGTACGGGGATCCCCAGGTGCACCCCCAGCCGGAGG
ACTACTGGGGCCATGTCAACCCCATCGGCCCGCGGGCCTGCTACGACGAGTCCAAGCGCCTGGCCGAAACCCTGACCTTT
GACTGGCAGCGGCAACACCAAACCGAGATCCGCGTGGCCCGCATCTTCAACACCTATGGCCCGGCCATGCGGGAAGACGA
TGGCCGTGTGGTCAGCAACTTCATCGTCCAGGCGCTGCGCGGGAATCCCCTCACCGTCTATGGAGATGGCTCCCAGACCC
GTAGCTTCTGCTACATCTCCGACCTCATCGAGGGCCTGGTGCGCCTGATGAACAGCCCTTATCCCGGCCCCTTTAACCTG
GGCAACCCGCAGGAGGTCACCATTCTAGAGTTGGCTCGGCAGGTTTTGGCCCTCACCGGCAGCTCTTCTCCCATCGTCCA
CCGGCCTCTCCCAACCGACGATCCCAAGCAGCGCCGGCCCGACATCAACAAGGCCCGCGCCCTGCTGGGCTGGGATCCCC
AGATTCCTCTGCAGCTTGGCCTGGAGCTGACTATCCCCTACTTTCGCCGCCGGCTGGGCCTGGAGTAG

Upstream 100 bases:

>100_bases
TTGCCGAGCTGATGCGGCGGCCCCTCATCCTCGACGGCCGCAACTGCCTTGACCGGCAGGCCGTTCAGCAGGCGGGCATT
ACCCTGATTGGAGTGGGCTG

Downstream 100 bases:

>100_bases
AGGATCCCTCTTGTCCTGGCGGGGCAGGCAGGAGGGTGGGCAGAGCTCGACAAAACCGTCATAATACGGAGAGAGGCCGT
CTTAAGCCTTCCATAACCTC

Product: NAD-dependent epimerase/dehydratase family protein

Products: NA

Alternate protein names: Galactowaldenase; UDP-galactose 4-epimerase [H]

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MKILVTGGLGFIGSHLVSRLLQEGHTVICLDNGYTGREENLQAHRNNPALTLLWHDVAEPLPPELEKAGIEQIYHLACPA
SPPHYQADPIRTIRTGVWGTYHLLELAQKTGARFLLASTSEVYGDPQVHPQPEDYWGHVNPIGPRACYDESKRLAETLTF
DWQRQHQTEIRVARIFNTYGPAMREDDGRVVSNFIVQALRGNPLTVYGDGSQTRSFCYISDLIEGLVRLMNSPYPGPFNL
GNPQEVTILELARQVLALTGSSSPIVHRPLPTDDPKQRRPDINKARALLGWDPQIPLQLGLELTIPYFRRRLGLE

Sequences:

>Translated_315_residues
MKILVTGGLGFIGSHLVSRLLQEGHTVICLDNGYTGREENLQAHRNNPALTLLWHDVAEPLPPELEKAGIEQIYHLACPA
SPPHYQADPIRTIRTGVWGTYHLLELAQKTGARFLLASTSEVYGDPQVHPQPEDYWGHVNPIGPRACYDESKRLAETLTF
DWQRQHQTEIRVARIFNTYGPAMREDDGRVVSNFIVQALRGNPLTVYGDGSQTRSFCYISDLIEGLVRLMNSPYPGPFNL
GNPQEVTILELARQVLALTGSSSPIVHRPLPTDDPKQRRPDINKARALLGWDPQIPLQLGLELTIPYFRRRLGLE
>Mature_315_residues
MKILVTGGLGFIGSHLVSRLLQEGHTVICLDNGYTGREENLQAHRNNPALTLLWHDVAEPLPPELEKAGIEQIYHLACPA
SPPHYQADPIRTIRTGVWGTYHLLELAQKTGARFLLASTSEVYGDPQVHPQPEDYWGHVNPIGPRACYDESKRLAETLTF
DWQRQHQTEIRVARIFNTYGPAMREDDGRVVSNFIVQALRGNPLTVYGDGSQTRSFCYISDLIEGLVRLMNSPYPGPFNL
GNPQEVTILELARQVLALTGSSSPIVHRPLPTDDPKQRRPDINKARALLGWDPQIPLQLGLELTIPYFRRRLGLE

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family [H]

Homologues:

Organism=Homo sapiens, GI42516563, Length=311, Percent_Identity=57.8778135048232, Blast_Score=383, Evalue=1e-106,
Organism=Homo sapiens, GI7657641, Length=329, Percent_Identity=27.0516717325228, Blast_Score=115, Evalue=4e-26,
Organism=Escherichia coli, GI1788589, Length=346, Percent_Identity=27.7456647398844, Blast_Score=108, Evalue=3e-25,
Organism=Escherichia coli, GI48994969, Length=336, Percent_Identity=28.2738095238095, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1788353, Length=341, Percent_Identity=26.6862170087977, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1786974, Length=328, Percent_Identity=27.4390243902439, Blast_Score=87, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17539532, Length=312, Percent_Identity=54.1666666666667, Blast_Score=361, Evalue=1e-100,
Organism=Caenorhabditis elegans, GI17568069, Length=330, Percent_Identity=25.7575757575758, Blast_Score=91, Evalue=9e-19,
Organism=Caenorhabditis elegans, GI115532424, Length=321, Percent_Identity=26.4797507788162, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI71982038, Length=338, Percent_Identity=24.8520710059172, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI71982035, Length=338, Percent_Identity=24.8520710059172, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI21356223, Length=312, Percent_Identity=55.4487179487179, Blast_Score=370, Evalue=1e-103,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: =5.1.3.2 [H]

Molecular weight: Translated: 35376; Mature: 35376

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILVTGGLGFIGSHLVSRLLQEGHTVICLDNGYTGREENLQAHRNNPALTLLWHDVAEP
CEEEEECCHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHCHHHHCCCCEEEEEEHHHCCC
LPPELEKAGIEQIYHLACPASPPHYQADPIRTIRTGVWGTYHLLELAQKTGARFLLASTS
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHCCCEEEEECCH
EVYGDPQVHPQPEDYWGHVNPIGPRACYDESKRLAETLTFDWQRQHQTEIRVARIFNTYG
HHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PAMREDDGRVVSNFIVQALRGNPLTVYGDGSQTRSFCYISDLIEGLVRLMNSPYPGPFNL
CCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
GNPQEVTILELARQVLALTGSSSPIVHRPLPTDDPKQRRPDINKARALLGWDPQIPLQLG
CCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHCCCHHHHHHHHCCCCCCCCEEC
LELTIPYFRRRLGLE
CEEECHHHHHHHCCC
>Mature Secondary Structure
MKILVTGGLGFIGSHLVSRLLQEGHTVICLDNGYTGREENLQAHRNNPALTLLWHDVAEP
CEEEEECCHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHCHHHHCCCCEEEEEEHHHCCC
LPPELEKAGIEQIYHLACPASPPHYQADPIRTIRTGVWGTYHLLELAQKTGARFLLASTS
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHCCCEEEEECCH
EVYGDPQVHPQPEDYWGHVNPIGPRACYDESKRLAETLTFDWQRQHQTEIRVARIFNTYG
HHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PAMREDDGRVVSNFIVQALRGNPLTVYGDGSQTRSFCYISDLIEGLVRLMNSPYPGPFNL
CCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
GNPQEVTILELARQVLALTGSSSPIVHRPLPTDDPKQRRPDINKARALLGWDPQIPLQLG
CCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHCCCHHHHHHHHCCCCCCCCEEC
LELTIPYFRRRLGLE
CEEECHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]