| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is phoP [H]
Identifier: 86605197
GI number: 86605197
Start: 497587
End: 497952
Strand: Reverse
Name: phoP [H]
Synonym: CYA_0479
Alternate gene names: 86605197
Gene position: 497952-497587 (Counterclockwise)
Preceding gene: 86605198
Following gene: 86605195
Centisome position: 16.98
GC content: 54.64
Gene sequence:
>366_bases ATGTCCAAACGCATCTTGGTGATTGAAGACGAACCCGCCATCCGCACCTATTTGCAGAAAGTGTTGCAACGAGCTGGGTA CGACACTGTCGCGGCCAGCGATGGGGAGGAAGGATTACAGATGGTGCACGCTCTCCTGCCGGATTTGGTGTTGTGCGATG TGGTCATGCCCAAGCTGAACGGCTATGGAGTGTTAGATGCCGTGAGATGGGGTCGGTCCACTGCCCACATCCCCTTTGTC TTTCTCTCCTCGAAAACCAGCCGAGAAGACATGGAAGAAGGGCTGCGGCTTGGCTCTAATGCCTACTTAACCAAGCCCAT CGACCAAAATCACCTGTTGAGAGCAATCGCCGCCCAACTGCTCTGA
Upstream 100 bases:
>100_bases CCTGTTCGTTCCCGCATCAACTCGGCTCTCGGTTGTTCCAGGAAGCCGACGGCCAGCCCAAGGGATTGGGGGTTTCTTGT TTGCTTTTTTACGAAGCCAC
Downstream 100 bases:
>100_bases ACTCTTAGCTATAGCCATTTACTATTGGGATAAAACTTCCAGGGAACCGAGAAAAGTTTTCCGGATCCCTGCCGGCTGTA GCTAAGGGGTCAGCGCCTGG
Product: response regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MSKRILVIEDEPAIRTYLQKVLQRAGYDTVAASDGEEGLQMVHALLPDLVLCDVVMPKLNGYGVLDAVRWGRSTAHIPFV FLSSKTSREDMEEGLRLGSNAYLTKPIDQNHLLRAIAAQLL
Sequences:
>Translated_121_residues MSKRILVIEDEPAIRTYLQKVLQRAGYDTVAASDGEEGLQMVHALLPDLVLCDVVMPKLNGYGVLDAVRWGRSTAHIPFV FLSSKTSREDMEEGLRLGSNAYLTKPIDQNHLLRAIAAQLL >Mature_120_residues SKRILVIEDEPAIRTYLQKVLQRAGYDTVAASDGEEGLQMVHALLPDLVLCDVVMPKLNGYGVLDAVRWGRSTAHIPFVF LSSKTSREDMEEGLRLGSNAYLTKPIDQNHLLRAIAAQLL
Specific function: Member of the two-component regulatory system phoP/phoR involved in the regulation of alkaline phosphatase genes phoA and phoB and of phosphodiesterase [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1787487, Length=121, Percent_Identity=33.8842975206612, Blast_Score=76, Evalue=5e-16, Organism=Escherichia coli, GI1786599, Length=118, Percent_Identity=33.8983050847458, Blast_Score=75, Evalue=1e-15, Organism=Escherichia coli, GI87082012, Length=119, Percent_Identity=35.2941176470588, Blast_Score=69, Evalue=6e-14, Organism=Escherichia coli, GI1790437, Length=108, Percent_Identity=34.2592592592593, Blast_Score=64, Evalue=2e-12, Organism=Escherichia coli, GI1788550, Length=110, Percent_Identity=30, Blast_Score=64, Evalue=2e-12, Organism=Escherichia coli, GI1790863, Length=108, Percent_Identity=33.3333333333333, Blast_Score=64, Evalue=2e-12, Organism=Escherichia coli, GI1787375, Length=104, Percent_Identity=29.8076923076923, Blast_Score=61, Evalue=2e-11, Organism=Escherichia coli, GI1788394, Length=105, Percent_Identity=34.2857142857143, Blast_Score=60, Evalue=3e-11, Organism=Escherichia coli, GI1786784, Length=111, Percent_Identity=33.3333333333333, Blast_Score=59, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001867 - InterPro: IPR016032 - InterPro: IPR001789 - InterPro: IPR011991 [H]
Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]
EC number: NA
Molecular weight: Translated: 13435; Mature: 13304
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKRILVIEDEPAIRTYLQKVLQRAGYDTVAASDGEEGLQMVHALLPDLVLCDVVMPKLN CCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC GYGVLDAVRWGRSTAHIPFVFLSSKTSREDMEEGLRLGSNAYLTKPIDQNHLLRAIAAQL CCCHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHH L C >Mature Secondary Structure SKRILVIEDEPAIRTYLQKVLQRAGYDTVAASDGEEGLQMVHALLPDLVLCDVVMPKLN CCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC GYGVLDAVRWGRSTAHIPFVFLSSKTSREDMEEGLRLGSNAYLTKPIDQNHLLRAIAAQL CCCHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHH L C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1454550; 3036763; 9387221; 9384377; 8045898; 3142862 [H]