| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86605192
Identifier: 86605192
GI number: 86605192
Start: 491778
End: 492188
Strand: Reverse
Name: 86605192
Synonym: CYA_0474
Alternate gene names: NA
Gene position: 492188-491778 (Counterclockwise)
Preceding gene: 86605193
Following gene: 86605191
Centisome position: 16.78
GC content: 54.5
Gene sequence:
>411_bases GTGGAAGTGCGCGTAACCTACCAAAATGGCGTTCAATTTCAAGCCCAAAGCCGCGGCCATCGCATCCTCAGCGATCAGCC TTTGGACAACCACGGCCAAGATCAGGGAATGACGCCGCCGGAGTGGTTTTTGGCCTCTTTGGGTGCTTGTGTGGGGTTCT ATGCCGTCAAGTATTTGGAAGCGCGGCAGTTGGATCCCAAAGGGCTGGAAGTGGTTGTTACCGCAGATAAAGTCGAGCAC CCTGCCCGCCTAGACAACATTTGCATTCGGGTGAAAAGTGGGATCCCGCTCGACGAAAAACACCAAAAAGGGTTGGAAAA GGCAGTCGATGCGTGCATCATCCACAACACCCTTACCCATCCCCCAAAAATGACCACTGAGATCCAGGTTCCCGCGCCTG TTGGCGCTTAG
Upstream 100 bases:
>100_bases TTAGGCTGTCTCCAAGGTAATGCTAAGTTGAACTTAGTTGAACCCAATAGTCTAGCAGCTTGCCAACTCTGGTAGCTCCA AAAATGAGGAGGGATCCCTG
Downstream 100 bases:
>100_bases CCGGTCAGCAGGCCCATGGAGTCTTGCAGCAATTTCTAACGGTTGCCTCAACTTTTAACCTGTATGGATGTAATTTTGGA GGATCCACCTATGCCTGTCA
Product: OsmC family protein
Products: NA
Alternate protein names: OsmC-Like Protein; OsmC Protein
Number of amino acids: Translated: 136; Mature: 136
Protein sequence:
>136_residues MEVRVTYQNGVQFQAQSRGHRILSDQPLDNHGQDQGMTPPEWFLASLGACVGFYAVKYLEARQLDPKGLEVVVTADKVEH PARLDNICIRVKSGIPLDEKHQKGLEKAVDACIIHNTLTHPPKMTTEIQVPAPVGA
Sequences:
>Translated_136_residues MEVRVTYQNGVQFQAQSRGHRILSDQPLDNHGQDQGMTPPEWFLASLGACVGFYAVKYLEARQLDPKGLEVVVTADKVEH PARLDNICIRVKSGIPLDEKHQKGLEKAVDACIIHNTLTHPPKMTTEIQVPAPVGA >Mature_136_residues MEVRVTYQNGVQFQAQSRGHRILSDQPLDNHGQDQGMTPPEWFLASLGACVGFYAVKYLEARQLDPKGLEVVVTADKVEH PARLDNICIRVKSGIPLDEKHQKGLEKAVDACIIHNTLTHPPKMTTEIQVPAPVGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15020; Mature: 15020
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVRVTYQNGVQFQAQSRGHRILSDQPLDNHGQDQGMTPPEWFLASLGACVGFYAVKYLE CEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH ARQLDPKGLEVVVTADKVEHPARLDNICIRVKSGIPLDEKHQKGLEKAVDACIIHNTLTH HHCCCCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCC PPKMTTEIQVPAPVGA CCCCCEEEECCCCCCC >Mature Secondary Structure MEVRVTYQNGVQFQAQSRGHRILSDQPLDNHGQDQGMTPPEWFLASLGACVGFYAVKYLE CEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH ARQLDPKGLEVVVTADKVEHPARLDNICIRVKSGIPLDEKHQKGLEKAVDACIIHNTLTH HHCCCCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCC PPKMTTEIQVPAPVGA CCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA