Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is 86605192

Identifier: 86605192

GI number: 86605192

Start: 491778

End: 492188

Strand: Reverse

Name: 86605192

Synonym: CYA_0474

Alternate gene names: NA

Gene position: 492188-491778 (Counterclockwise)

Preceding gene: 86605193

Following gene: 86605191

Centisome position: 16.78

GC content: 54.5

Gene sequence:

>411_bases
GTGGAAGTGCGCGTAACCTACCAAAATGGCGTTCAATTTCAAGCCCAAAGCCGCGGCCATCGCATCCTCAGCGATCAGCC
TTTGGACAACCACGGCCAAGATCAGGGAATGACGCCGCCGGAGTGGTTTTTGGCCTCTTTGGGTGCTTGTGTGGGGTTCT
ATGCCGTCAAGTATTTGGAAGCGCGGCAGTTGGATCCCAAAGGGCTGGAAGTGGTTGTTACCGCAGATAAAGTCGAGCAC
CCTGCCCGCCTAGACAACATTTGCATTCGGGTGAAAAGTGGGATCCCGCTCGACGAAAAACACCAAAAAGGGTTGGAAAA
GGCAGTCGATGCGTGCATCATCCACAACACCCTTACCCATCCCCCAAAAATGACCACTGAGATCCAGGTTCCCGCGCCTG
TTGGCGCTTAG

Upstream 100 bases:

>100_bases
TTAGGCTGTCTCCAAGGTAATGCTAAGTTGAACTTAGTTGAACCCAATAGTCTAGCAGCTTGCCAACTCTGGTAGCTCCA
AAAATGAGGAGGGATCCCTG

Downstream 100 bases:

>100_bases
CCGGTCAGCAGGCCCATGGAGTCTTGCAGCAATTTCTAACGGTTGCCTCAACTTTTAACCTGTATGGATGTAATTTTGGA
GGATCCACCTATGCCTGTCA

Product: OsmC family protein

Products: NA

Alternate protein names: OsmC-Like Protein; OsmC Protein

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MEVRVTYQNGVQFQAQSRGHRILSDQPLDNHGQDQGMTPPEWFLASLGACVGFYAVKYLEARQLDPKGLEVVVTADKVEH
PARLDNICIRVKSGIPLDEKHQKGLEKAVDACIIHNTLTHPPKMTTEIQVPAPVGA

Sequences:

>Translated_136_residues
MEVRVTYQNGVQFQAQSRGHRILSDQPLDNHGQDQGMTPPEWFLASLGACVGFYAVKYLEARQLDPKGLEVVVTADKVEH
PARLDNICIRVKSGIPLDEKHQKGLEKAVDACIIHNTLTHPPKMTTEIQVPAPVGA
>Mature_136_residues
MEVRVTYQNGVQFQAQSRGHRILSDQPLDNHGQDQGMTPPEWFLASLGACVGFYAVKYLEARQLDPKGLEVVVTADKVEH
PARLDNICIRVKSGIPLDEKHQKGLEKAVDACIIHNTLTHPPKMTTEIQVPAPVGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15020; Mature: 15020

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVRVTYQNGVQFQAQSRGHRILSDQPLDNHGQDQGMTPPEWFLASLGACVGFYAVKYLE
CEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
ARQLDPKGLEVVVTADKVEHPARLDNICIRVKSGIPLDEKHQKGLEKAVDACIIHNTLTH
HHCCCCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCC
PPKMTTEIQVPAPVGA
CCCCCEEEECCCCCCC
>Mature Secondary Structure
MEVRVTYQNGVQFQAQSRGHRILSDQPLDNHGQDQGMTPPEWFLASLGACVGFYAVKYLE
CEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
ARQLDPKGLEVVVTADKVEHPARLDNICIRVKSGIPLDEKHQKGLEKAVDACIIHNTLTH
HHCCCCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCC
PPKMTTEIQVPAPVGA
CCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA