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The map label for this gene is pbsA1 [H]

Identifier: 86605127

GI number: 86605127

Start: 423116

End: 423829

Strand: Reverse

Name: pbsA1 [H]

Synonym: CYA_0408

Alternate gene names: 86605127

Gene position: 423829-423116 (Counterclockwise)

Preceding gene: 86605132

Following gene: 86605125

Centisome position: 14.45

GC content: 58.26

Gene sequence:

>714_bases
TTGTCGGCCCAGTTGCGAGAGGGCACCAAGCAGTCCCACACCATGGCCGAGAACATGGCCTTTATCAAGTGTTTCCTCAA
GGGAGTGGTGGATAAAAAAGCCTACAGCCGCTATGTGGGCAACTTTTACTTTGTCTACAGCGCTCTGGAAGAGGGCTTTG
CCCAATTGCGAGAGCACCCGCTGGTGGGCCGGCTTTACTATCCCGAATTGTGGCGCAGGGCCAGCCTGGAGAAGGATTTA
AATTATTTTGTCGGCCCCAATTGGCGTGCCGTGGTCAAGCCCTCTCCCGCTTGCCAGGTCTATGTCAACCGCATTCGAGA
AGTGGTGGAAAAAGACCCGGTTCTGCTGATTGCCCACGCCTACACCCGCTACATCGGCGACCTCTCGGGCGGCCAGATCC
TGAAAAACATCGCCCGCCGGGCCATGGGCCTGCCGCCGGGGGAAGGAACGGCCTTTTACGATTTCGAGCAGATCCCCCAC
GAGGGCAAGTTTAAGCAGCGCTACCGCGCCCAGTTGGACGCGCTGGAGCTGGATCAGGCCACCATCGAGCGCATTGTGGC
GGAAGCCAACTACGCCTTCAAGCTCAACATGGACTTGTTCAAGGAATTGGAGGGCAATTGGCTGCTATCCATGGCCCGCT
TGGCCTGGAACTCGCTGCTCAGCCAGTTTCAACGCAAGCCCGCCCGTTCTGAGGCAGCCGCTTCCAGCTCCTAA

Upstream 100 bases:

>100_bases
GTGATCTAATGAAGCACAGTTTGTTGGCGAGGAGGGTTTTGTGAGTCAAAGCCAGAACAATCAGAATAAAAAAAGTGATC
TGTATAACCGGGACCACAGC

Downstream 100 bases:

>100_bases
AATCCGGATTCCAGAGGGCAGTGAGGCGATGGGTTCTGCTGCCTATCTCCCCTCTCCCTCTGGGAGAAGAGCCGGGGGTG
AGGATCAGTCACATTCAAGA

Product: heme oxygenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 236

Protein sequence:

>237_residues
MSAQLREGTKQSHTMAENMAFIKCFLKGVVDKKAYSRYVGNFYFVYSALEEGFAQLREHPLVGRLYYPELWRRASLEKDL
NYFVGPNWRAVVKPSPACQVYVNRIREVVEKDPVLLIAHAYTRYIGDLSGGQILKNIARRAMGLPPGEGTAFYDFEQIPH
EGKFKQRYRAQLDALELDQATIERIVAEANYAFKLNMDLFKELEGNWLLSMARLAWNSLLSQFQRKPARSEAAASSS

Sequences:

>Translated_237_residues
MSAQLREGTKQSHTMAENMAFIKCFLKGVVDKKAYSRYVGNFYFVYSALEEGFAQLREHPLVGRLYYPELWRRASLEKDL
NYFVGPNWRAVVKPSPACQVYVNRIREVVEKDPVLLIAHAYTRYIGDLSGGQILKNIARRAMGLPPGEGTAFYDFEQIPH
EGKFKQRYRAQLDALELDQATIERIVAEANYAFKLNMDLFKELEGNWLLSMARLAWNSLLSQFQRKPARSEAAASSS
>Mature_236_residues
SAQLREGTKQSHTMAENMAFIKCFLKGVVDKKAYSRYVGNFYFVYSALEEGFAQLREHPLVGRLYYPELWRRASLEKDLN
YFVGPNWRAVVKPSPACQVYVNRIREVVEKDPVLLIAHAYTRYIGDLSGGQILKNIARRAMGLPPGEGTAFYDFEQIPHE
GKFKQRYRAQLDALELDQATIERIVAEANYAFKLNMDLFKELEGNWLLSMARLAWNSLLSQFQRKPARSEAAASSS

Specific function: Catalyzes the opening of the heme ring with the release of iron. Key enzyme in the synthesis of the chromophoric part of the photosynthetic antennae [H]

COG id: COG5398

COG function: function code P; Heme oxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the heme oxygenase family [H]

Homologues:

Organism=Homo sapiens, GI187761311, Length=206, Percent_Identity=50.4854368932039, Blast_Score=207, Evalue=7e-54,
Organism=Homo sapiens, GI187761309, Length=206, Percent_Identity=50.4854368932039, Blast_Score=207, Evalue=7e-54,
Organism=Homo sapiens, GI187761307, Length=206, Percent_Identity=50.4854368932039, Blast_Score=207, Evalue=7e-54,
Organism=Homo sapiens, GI8051608, Length=206, Percent_Identity=50.4854368932039, Blast_Score=207, Evalue=7e-54,
Organism=Homo sapiens, GI4504437, Length=206, Percent_Identity=46.6019417475728, Blast_Score=195, Evalue=3e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002051
- InterPro:   IPR016053
- InterPro:   IPR016084
- InterPro:   IPR018207 [H]

Pfam domain/function: PF01126 Heme_oxygenase [H]

EC number: =1.14.99.3 [H]

Molecular weight: Translated: 27171; Mature: 27040

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: PS00593 HEME_OXYGENASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAQLREGTKQSHTMAENMAFIKCFLKGVVDKKAYSRYVGNFYFVYSALEEGFAQLREHP
CCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LVGRLYYPELWRRASLEKDLNYFVGPNWRAVVKPSPACQVYVNRIREVVEKDPVLLIAHA
CCCEEHHHHHHHHHHHHHHCCEEECCCCEEEECCCCHHHHHHHHHHHHHHCCCEEEEHHH
YTRYIGDLSGGQILKNIARRAMGLPPGEGTAFYDFEQIPHEGKFKQRYRAQLDALELDQA
HHHHHCCCCCHHHHHHHHHHHCCCCCCCCCEEEEHHHCCCCCHHHHHHHHHHHHHHHHHH
TIERIVAEANYAFKLNMDLFKELEGNWLLSMARLAWNSLLSQFQRKPARSEAAASSS
HHHHHHHHCCCEEEECHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCC
>Mature Secondary Structure 
SAQLREGTKQSHTMAENMAFIKCFLKGVVDKKAYSRYVGNFYFVYSALEEGFAQLREHP
CCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LVGRLYYPELWRRASLEKDLNYFVGPNWRAVVKPSPACQVYVNRIREVVEKDPVLLIAHA
CCCEEHHHHHHHHHHHHHHCCEEECCCCEEEECCCCHHHHHHHHHHHHHHCCCEEEEHHH
YTRYIGDLSGGQILKNIARRAMGLPPGEGTAFYDFEQIPHEGKFKQRYRAQLDALELDQA
HHHHHCCCCCHHHHHHHHHHHCCCCCCCCCEEEEHHHCCCCCHHHHHHHHHHHHHHHHHH
TIERIVAEANYAFKLNMDLFKELEGNWLLSMARLAWNSLLSQFQRKPARSEAAASSS
HHHHHHHHCCCEEEECHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]