BacMap

Definition	Synechococcus sp. JA-3-3Ab, complete genome.
Accession	NC_007775
Length	2,932,766

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The map label for this gene is glnQ [H]

Identifier: 86604952

GI number: 86604952

Start: 231451

End: 231828

Strand: Reverse

Name: glnQ [H]

Synonym: CYA_0228

Alternate gene names: 86604952

Gene position: 231828-231451 (Counterclockwise)

Preceding gene: 86604957

Following gene: 86604950

Centisome position: 7.9

GC content: 58.99

Gene sequence:

>378_bases
ATGGAGGTGTTGAGACGAGTGGGGATCGCCGAGCAAGCCGAGAAGTATCCTGGTCAACTTTCGGGGAGGCAGCAGCAGCG
GGTGGCGATTGCCCGCGCTTTGGCCATAAATCCGGCGGTGATGCTCTTCGATGAGCCCACCTCGGCCTTGGATCCGGAGA
TGGTCAAAGAGGTGCTGGACGTGATGCGGGAGCTGGCCCGCTCGGGCATGACCATGGTGTGTGTAACCCACGAGATGGGC
TTTGCCCGCGAGGTGGCGGATCGGATTGTCTTCTTCGACCGCGGCAAGATCGTGGAAGAAAACACCCCCCAAGAGTTTTT
CAGCAACCCCAAGGAAGAGCGTTCTCGCCTTTTCTTGTCGCAGATCCTGTCCCACTAA

Upstream 100 bases:

>100_bases
CGATGTTCCGCCGATGGCGGGCCAGAAAGCTAGCTCCACTCGCTTCAGCAGTTGCGCTCATAGAAATAGATAGAAAAAGG
CCGAGGCAGTTGAACGGGCT

Downstream 100 bases:

>100_bases
GGGGCTGCGCTTAGAGAGGCGCAAGCCGTGCCAGAAAGGCCCCCTCCGGCTCTTGGTAGAGAATTTGTCCCTGCCAGCCG
TTGGCGTGGGCACAGCGCAG

Product: polar amino acid ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MEVLRRVGIAEQAEKYPGQLSGRQQQRVAIARALAINPAVMLFDEPTSALDPEMVKEVLDVMRELARSGMTMVCVTHEMG
FAREVADRIVFFDRGKIVEENTPQEFFSNPKEERSRLFLSQILSH

Sequences:

>Translated_125_residues
MEVLRRVGIAEQAEKYPGQLSGRQQQRVAIARALAINPAVMLFDEPTSALDPEMVKEVLDVMRELARSGMTMVCVTHEMG
FAREVADRIVFFDRGKIVEENTPQEFFSNPKEERSRLFLSQILSH
>Mature_125_residues
MEVLRRVGIAEQAEKYPGQLSGRQQQRVAIARALAINPAVMLFDEPTSALDPEMVKEVLDVMRELARSGMTMVCVTHEMG
FAREVADRIVFFDRGKIVEENTPQEFFSNPKEERSRLFLSQILSH

Specific function: Part of the ABC transporter complex GlnHMPQ involved in glutamine transport. Probably responsible for energy coupling to the transport system [H]

COG id: COG1126

COG function: function code E; ABC-type polar amino acid transport system, ATPase component

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI148612844, Length=91, Percent_Identity=48.3516483516484, Blast_Score=73, Evalue=5e-14,
Organism=Homo sapiens, GI42741659, Length=89, Percent_Identity=47.1910112359551, Blast_Score=72, Evalue=9e-14,
Organism=Homo sapiens, GI46592898, Length=98, Percent_Identity=37.7551020408163, Blast_Score=72, Evalue=1e-13,
Organism=Homo sapiens, GI46592915, Length=98, Percent_Identity=37.7551020408163, Blast_Score=72, Evalue=1e-13,
Organism=Homo sapiens, GI46592978, Length=98, Percent_Identity=37.7551020408163, Blast_Score=72, Evalue=1e-13,
Organism=Homo sapiens, GI46592956, Length=98, Percent_Identity=37.7551020408163, Blast_Score=72, Evalue=1e-13,
Organism=Homo sapiens, GI46592971, Length=98, Percent_Identity=37.7551020408163, Blast_Score=72, Evalue=1e-13,
Organism=Homo sapiens, GI255708477, Length=92, Percent_Identity=47.8260869565217, Blast_Score=72, Evalue=1e-13,
Organism=Homo sapiens, GI9961250, Length=89, Percent_Identity=46.0674157303371, Blast_Score=72, Evalue=2e-13,
Organism=Homo sapiens, GI4505771, Length=89, Percent_Identity=46.0674157303371, Blast_Score=72, Evalue=2e-13,
Organism=Homo sapiens, GI9961252, Length=89, Percent_Identity=46.0674157303371, Blast_Score=71, Evalue=2e-13,
Organism=Homo sapiens, GI46592964, Length=98, Percent_Identity=37.7551020408163, Blast_Score=70, Evalue=5e-13,
Organism=Homo sapiens, GI171184400, Length=95, Percent_Identity=41.0526315789474, Blast_Score=69, Evalue=1e-12,
Organism=Homo sapiens, GI42490749, Length=103, Percent_Identity=34.9514563106796, Blast_Score=69, Evalue=1e-12,
Organism=Homo sapiens, GI215820660, Length=98, Percent_Identity=35.7142857142857, Blast_Score=68, Evalue=2e-12,
Organism=Homo sapiens, GI20143975, Length=98, Percent_Identity=35.7142857142857, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1789672, Length=120, Percent_Identity=71.6666666666667, Blast_Score=185, Evalue=6e-49,
Organism=Escherichia coli, GI1786872, Length=123, Percent_Identity=63.4146341463415, Blast_Score=170, Evalue=3e-44,
Organism=Escherichia coli, GI1787029, Length=121, Percent_Identity=59.504132231405, Blast_Score=154, Evalue=2e-39,
Organism=Escherichia coli, GI1788225, Length=122, Percent_Identity=58.1967213114754, Blast_Score=148, Evalue=1e-37,
Organism=Escherichia coli, GI1788644, Length=120, Percent_Identity=59.1666666666667, Blast_Score=145, Evalue=9e-37,
Organism=Escherichia coli, GI1787089, Length=120, Percent_Identity=45.8333333333333, Blast_Score=113, Evalue=3e-27,
Organism=Escherichia coli, GI1786398, Length=123, Percent_Identity=41.4634146341463, Blast_Score=112, Evalue=8e-27,
Organism=Escherichia coli, GI1789032, Length=130, Percent_Identity=40, Blast_Score=99, Evalue=1e-22,
Organism=Escherichia coli, GI1788761, Length=110, Percent_Identity=43.6363636363636, Blast_Score=91, Evalue=3e-20,
Organism=Escherichia coli, GI1787370, Length=123, Percent_Identity=42.2764227642276, Blast_Score=89, Evalue=1e-19,
Organism=Escherichia coli, GI145693107, Length=109, Percent_Identity=38.5321100917431, Blast_Score=87, Evalue=4e-19,
Organism=Escherichia coli, GI1789962, Length=122, Percent_Identity=34.4262295081967, Blast_Score=87, Evalue=4e-19,
Organism=Escherichia coli, GI1788506, Length=124, Percent_Identity=36.2903225806452, Blast_Score=86, Evalue=5e-19,
Organism=Escherichia coli, GI1788450, Length=112, Percent_Identity=41.0714285714286, Blast_Score=86, Evalue=5e-19,
Organism=Escherichia coli, GI87081791, Length=122, Percent_Identity=40.9836065573771, Blast_Score=86, Evalue=6e-19,
Organism=Escherichia coli, GI1787712, Length=111, Percent_Identity=38.7387387387387, Blast_Score=84, Evalue=3e-18,
Organism=Escherichia coli, GI1787758, Length=123, Percent_Identity=36.5853658536585, Blast_Score=83, Evalue=7e-18,
Organism=Escherichia coli, GI1790544, Length=107, Percent_Identity=39.2523364485981, Blast_Score=82, Evalue=9e-18,
Organism=Escherichia coli, GI1787500, Length=110, Percent_Identity=32.7272727272727, Blast_Score=82, Evalue=1e-17,
Organism=Escherichia coli, GI1787105, Length=97, Percent_Identity=45.360824742268, Blast_Score=81, Evalue=2e-17,
Organism=Escherichia coli, GI1789963, Length=123, Percent_Identity=33.3333333333333, Blast_Score=80, Evalue=4e-17,
Organism=Escherichia coli, GI87081709, Length=110, Percent_Identity=38.1818181818182, Blast_Score=80, Evalue=4e-17,
Organism=Escherichia coli, GI48994997, Length=115, Percent_Identity=33.9130434782609, Blast_Score=80, Evalue=6e-17,
Organism=Escherichia coli, GI1790162, Length=101, Percent_Identity=37.6237623762376, Blast_Score=76, Evalue=7e-16,
Organism=Escherichia coli, GI1790467, Length=105, Percent_Identity=39.0476190476191, Blast_Score=75, Evalue=1e-15,
Organism=Escherichia coli, GI1787164, Length=92, Percent_Identity=42.3913043478261, Blast_Score=74, Evalue=3e-15,
Organism=Escherichia coli, GI1789873, Length=94, Percent_Identity=38.2978723404255, Blast_Score=74, Evalue=4e-15,
Organism=Escherichia coli, GI1787547, Length=122, Percent_Identity=27.8688524590164, Blast_Score=72, Evalue=8e-15,
Organism=Escherichia coli, GI1789864, Length=115, Percent_Identity=29.5652173913043, Blast_Score=71, Evalue=3e-14,
Organism=Escherichia coli, GI1786253, Length=119, Percent_Identity=34.453781512605, Blast_Score=70, Evalue=3e-14,
Organism=Escherichia coli, GI87081834, Length=101, Percent_Identity=37.6237623762376, Blast_Score=70, Evalue=5e-14,
Organism=Escherichia coli, GI1786803, Length=114, Percent_Identity=35.0877192982456, Blast_Score=69, Evalue=1e-13,
Organism=Escherichia coli, GI1786703, Length=99, Percent_Identity=37.3737373737374, Blast_Score=68, Evalue=2e-13,
Organism=Escherichia coli, GI87082268, Length=92, Percent_Identity=34.7826086956522, Blast_Score=67, Evalue=3e-13,
Organism=Escherichia coli, GI1787759, Length=103, Percent_Identity=31.0679611650485, Blast_Score=65, Evalue=1e-12,
Organism=Escherichia coli, GI1789890, Length=110, Percent_Identity=32.7272727272727, Blast_Score=64, Evalue=2e-12,
Organism=Escherichia coli, GI1790739, Length=90, Percent_Identity=36.6666666666667, Blast_Score=64, Evalue=2e-12,
Organism=Escherichia coli, GI1787112, Length=117, Percent_Identity=35.8974358974359, Blast_Score=64, Evalue=3e-12,
Organism=Escherichia coli, GI1786563, Length=95, Percent_Identity=36.8421052631579, Blast_Score=64, Evalue=3e-12,
Organism=Escherichia coli, GI1789891, Length=100, Percent_Identity=35, Blast_Score=64, Evalue=4e-12,
Organism=Escherichia coli, GI1790190, Length=92, Percent_Identity=34.7826086956522, Blast_Score=63, Evalue=7e-12,
Organism=Escherichia coli, GI1789593, Length=103, Percent_Identity=32.0388349514563, Blast_Score=63, Evalue=7e-12,
Organism=Escherichia coli, GI48994883, Length=108, Percent_Identity=29.6296296296296, Blast_Score=62, Evalue=1e-11,
Organism=Escherichia coli, GI1786345, Length=107, Percent_Identity=32.7102803738318, Blast_Score=62, Evalue=2e-11,
Organism=Escherichia coli, GI87082267, Length=98, Percent_Identity=37.7551020408163, Blast_Score=62, Evalue=2e-11,
Organism=Escherichia coli, GI1787182, Length=79, Percent_Identity=39.2405063291139, Blast_Score=61, Evalue=2e-11,
Organism=Escherichia coli, GI48995001, Length=74, Percent_Identity=39.1891891891892, Blast_Score=60, Evalue=3e-11,
Organism=Escherichia coli, GI1790525, Length=81, Percent_Identity=38.2716049382716, Blast_Score=60, Evalue=4e-11,
Organism=Escherichia coli, GI1788897, Length=100, Percent_Identity=33, Blast_Score=59, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI193202349, Length=90, Percent_Identity=47.7777777777778, Blast_Score=79, Evalue=7e-16,
Organism=Caenorhabditis elegans, GI193209708, Length=91, Percent_Identity=43.956043956044, Blast_Score=75, Evalue=9e-15,
Organism=Caenorhabditis elegans, GI17569143, Length=93, Percent_Identity=46.2365591397849, Blast_Score=73, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI17569145, Length=94, Percent_Identity=44.6808510638298, Blast_Score=72, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI115535101, Length=102, Percent_Identity=42.156862745098, Blast_Score=72, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI17567265, Length=88, Percent_Identity=46.5909090909091, Blast_Score=72, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI17567269, Length=88, Percent_Identity=46.5909090909091, Blast_Score=71, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI25146777, Length=108, Percent_Identity=38.8888888888889, Blast_Score=71, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17541710, Length=93, Percent_Identity=44.0860215053763, Blast_Score=68, Evalue=9e-13,
Organism=Caenorhabditis elegans, GI17565938, Length=104, Percent_Identity=36.5384615384615, Blast_Score=67, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI71996809, Length=90, Percent_Identity=42.2222222222222, Blast_Score=66, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI193211017, Length=90, Percent_Identity=42.2222222222222, Blast_Score=66, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI193211015, Length=90, Percent_Identity=42.2222222222222, Blast_Score=66, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI212646699, Length=85, Percent_Identity=44.7058823529412, Blast_Score=65, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI17558664, Length=84, Percent_Identity=41.6666666666667, Blast_Score=65, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6324985, Length=100, Percent_Identity=38, Blast_Score=67, Evalue=9e-13,
Organism=Saccharomyces cerevisiae, GI6323217, Length=103, Percent_Identity=33.0097087378641, Blast_Score=65, Evalue=2e-12,
Organism=Drosophila melanogaster, GI17136662, Length=90, Percent_Identity=45.5555555555556, Blast_Score=75, Evalue=7e-15,
Organism=Drosophila melanogaster, GI161076684, Length=101, Percent_Identity=39.6039603960396, Blast_Score=74, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24581617, Length=101, Percent_Identity=39.6039603960396, Blast_Score=74, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24581615, Length=101, Percent_Identity=39.6039603960396, Blast_Score=74, Evalue=2e-14,
Organism=Drosophila melanogaster, GI161076682, Length=101, Percent_Identity=39.6039603960396, Blast_Score=74, Evalue=2e-14,
Organism=Drosophila melanogaster, GI281363262, Length=106, Percent_Identity=44.3396226415094, Blast_Score=73, Evalue=5e-14,
Organism=Drosophila melanogaster, GI24653245, Length=104, Percent_Identity=42.3076923076923, Blast_Score=72, Evalue=6e-14,
Organism=Drosophila melanogaster, GI85726357, Length=88, Percent_Identity=44.3181818181818, Blast_Score=70, Evalue=2e-13,
Organism=Drosophila melanogaster, GI28574744, Length=76, Percent_Identity=38.1578947368421, Blast_Score=67, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24659289, Length=91, Percent_Identity=45.0549450549451, Blast_Score=67, Evalue=3e-12,
Organism=Drosophila melanogaster, GI23397593, Length=90, Percent_Identity=43.3333333333333, Blast_Score=67, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24641565, Length=99, Percent_Identity=39.3939393939394, Blast_Score=65, Evalue=1e-11,
Organism=Drosophila melanogaster, GI21357851, Length=104, Percent_Identity=34.6153846153846, Blast_Score=65, Evalue=1e-11,
Organism=Drosophila melanogaster, GI45551501, Length=89, Percent_Identity=37.0786516853933, Blast_Score=63, Evalue=4e-11,
Organism=Drosophila melanogaster, GI45551502, Length=89, Percent_Identity=37.0786516853933, Blast_Score=63, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 14238; Mature: 14238

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVLRRVGIAEQAEKYPGQLSGRQQQRVAIARALAINPAVMLFDEPTSALDPEMVKEVLD
CHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHH
VMRELARSGMTMVCVTHEMGFAREVADRIVFFDRGKIVEENTPQEFFSNPKEERSRLFLS
HHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCHHHHHHHHHH
QILSH
HHHCC
>Mature Secondary Structure
MEVLRRVGIAEQAEKYPGQLSGRQQQRVAIARALAINPAVMLFDEPTSALDPEMVKEVLD
CHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHH
VMRELARSGMTMVCVTHEMGFAREVADRIVFFDRGKIVEENTPQEFFSNPKEERSRLFLS
HHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCHHHHHHHHHH
QILSH
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7551042; 9384377 [H]