Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is 86604851

Identifier: 86604851

GI number: 86604851

Start: 116244

End: 116555

Strand: Reverse

Name: 86604851

Synonym: CYA_0121

Alternate gene names: NA

Gene position: 116555-116244 (Counterclockwise)

Preceding gene: 86604852

Following gene: 86604850

Centisome position: 3.97

GC content: 55.77

Gene sequence:

>312_bases
ATGGACAGTTTGTTTGCCCTTTCTCTATTTCCCTATTTGGCCTTCTTGTTTTTCCTGTCGCGGCTCCGCCGGATCCCGCG
CCTGGCTTTGATCGGGTTTTGGCTGCTGCTACTGTTTGTGGCCGTCAGCATCCCGGCAGGGTTGTATGCCCAACTGCATT
ACGGCACTTCCCTGGCCAATGTGGATCCCTTGCATGGGGGAGCAGAGGCTTTCCTCACCCTCTCCAACATTCTGGTGGCC
CTGGGCTTCAAGCAAGCCATTGACCAACAGGGATCCCCAGAGGTCGAGGAAGACAGCTCCGAGTTGTATTGA

Upstream 100 bases:

>100_bases
GACACTTCTGGGCAATTGCACTCTGGCCTGGGCTGCCTACCGCATTTGGCGGGCGGAGCAGGCGGATCAGTCCCTTGGGA
GGAGGGATCCAAGCTAGGCG

Downstream 100 bases:

>100_bases
CCTTCTCCCCAGTCCAGATTCTTTCTCGCTTGTCGCGAGCTACAGGGGCGGGAGACTGCCATATGTTTGTGGGGGAGGCC
ATAACCCCAACCTGGACCTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 103; Mature: 103

Protein sequence:

>103_residues
MDSLFALSLFPYLAFLFFLSRLRRIPRLALIGFWLLLLFVAVSIPAGLYAQLHYGTSLANVDPLHGGAEAFLTLSNILVA
LGFKQAIDQQGSPEVEEDSSELY

Sequences:

>Translated_103_residues
MDSLFALSLFPYLAFLFFLSRLRRIPRLALIGFWLLLLFVAVSIPAGLYAQLHYGTSLANVDPLHGGAEAFLTLSNILVA
LGFKQAIDQQGSPEVEEDSSELY
>Mature_103_residues
MDSLFALSLFPYLAFLFFLSRLRRIPRLALIGFWLLLLFVAVSIPAGLYAQLHYGTSLANVDPLHGGAEAFLTLSNILVA
LGFKQAIDQQGSPEVEEDSSELY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11390; Mature: 11390

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSLFALSLFPYLAFLFFLSRLRRIPRLALIGFWLLLLFVAVSIPAGLYAQLHYGTSLAN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCC
VDPLHGGAEAFLTLSNILVALGFKQAIDQQGSPEVEEDSSELY
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDSLFALSLFPYLAFLFFLSRLRRIPRLALIGFWLLLLFVAVSIPAGLYAQLHYGTSLAN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCC
VDPLHGGAEAFLTLSNILVALGFKQAIDQQGSPEVEEDSSELY
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA