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The map label for this gene is rpe

Identifier: 86604814

GI number: 86604814

Start: 82982

End: 83692

Strand: Reverse

Name: rpe

Synonym: CYA_0084

Alternate gene names: 86604814

Gene position: 83692-82982 (Counterclockwise)

Preceding gene: 86604815

Following gene: 86604812

Centisome position: 2.85

GC content: 62.03

Gene sequence:

>711_bases
ATGACTCAGCCGTCAGCAGCTTCTGGGCAAAAGCCGATCGTCGTCGCCCCCTCCATCCTTTCAGCCGATTTTAGCCGCTT
GGGGGAAGAAGTGCGGGCGGTGGACGAGGCAGGGGCCGACTGGATCCACGTGGATGTGATGGATGGCCGCTTTGTGCCCA
ACATCACCATCGGCCCGCTGGTGGTAGAAGCCCTGCGCCCGGTTACGGCCAAGCCTCTGGATGTCCACCTGATGATTGTG
GAGCCGGAAAAGTATGTGGCCGACTTTGCCAAGGCGGGGGCCGATATCATCTCCGTTCACGCCGAGTCCAGCTCCACCAT
TCACCTGCACCGCACCCTCGGACAAATCAAGGATCTGGGCAAGCAAGCAGGCGTGGTGCTCAACCCCGCCAGCCCCCTGG
AGCTGATCCAGTACGTGCTGGATCTGGTGGATCTGGTGTTGATCATGAGTGTCAACCCTGGCTTTGGCGGGCAGAGCTTC
ATCCCGGCGGTGGTGCCCAAGATTCGCCAGTTGCGAGCCCTGTGCGACGAGCGCGGCTTGGATCCCTGGATTGAAGTAGA
TGGCGGCATCAAGGCCAGCAACGCCTGGCAGGTGATCGAGGCGGGGGCCAACGCCATCGTGGCTGGCTCAGCCGTGTTCA
AGGCCAAGGACTACGGGGAAGCCATTCGTGCCATTCGCCACAGCCGCCGCCCCGAGCTGGTAACGGTTTGA

Upstream 100 bases:

>100_bases
CTAGGCTCCGAGCCAAGAGGCAGTTTGCAAAGGGGATCAAACTCCGTACCATAGAGGAGCGAGCTCCCCTATTTTGCGGT
TTACAACTTGGATACTCACC

Downstream 100 bases:

>100_bases
TTTGAGCTGATCTGGGAAAACCCTGCCCTTGGACTCCTCTCAGGCCAAGGCGCAAAAGAGAGGGGAGAAGGCCTGGCGCT
CCTCACCCTCAGCCCATTGG

Product: ribulose-phosphate 3-epimerase

Products: NA

Alternate protein names: Pentose-5-phosphate 3-epimerase; PPE; R5P3E [H]

Number of amino acids: Translated: 236; Mature: 235

Protein sequence:

>236_residues
MTQPSAASGQKPIVVAPSILSADFSRLGEEVRAVDEAGADWIHVDVMDGRFVPNITIGPLVVEALRPVTAKPLDVHLMIV
EPEKYVADFAKAGADIISVHAESSSTIHLHRTLGQIKDLGKQAGVVLNPASPLELIQYVLDLVDLVLIMSVNPGFGGQSF
IPAVVPKIRQLRALCDERGLDPWIEVDGGIKASNAWQVIEAGANAIVAGSAVFKAKDYGEAIRAIRHSRRPELVTV

Sequences:

>Translated_236_residues
MTQPSAASGQKPIVVAPSILSADFSRLGEEVRAVDEAGADWIHVDVMDGRFVPNITIGPLVVEALRPVTAKPLDVHLMIV
EPEKYVADFAKAGADIISVHAESSSTIHLHRTLGQIKDLGKQAGVVLNPASPLELIQYVLDLVDLVLIMSVNPGFGGQSF
IPAVVPKIRQLRALCDERGLDPWIEVDGGIKASNAWQVIEAGANAIVAGSAVFKAKDYGEAIRAIRHSRRPELVTV
>Mature_235_residues
TQPSAASGQKPIVVAPSILSADFSRLGEEVRAVDEAGADWIHVDVMDGRFVPNITIGPLVVEALRPVTAKPLDVHLMIVE
PEKYVADFAKAGADIISVHAESSSTIHLHRTLGQIKDLGKQAGVVLNPASPLELIQYVLDLVDLVLIMSVNPGFGGQSFI
PAVVPKIRQLRALCDERGLDPWIEVDGGIKASNAWQVIEAGANAIVAGSAVFKAKDYGEAIRAIRHSRRPELVTV

Specific function: Unknown

COG id: COG0036

COG function: function code G; Pentose-5-phosphate-3-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribulose-phosphate 3-epimerase family [H]

Homologues:

Organism=Homo sapiens, GI40385883, Length=223, Percent_Identity=39.0134529147982, Blast_Score=152, Evalue=3e-37,
Organism=Homo sapiens, GI219879828, Length=223, Percent_Identity=36.7713004484305, Blast_Score=142, Evalue=3e-34,
Organism=Homo sapiens, GI24307923, Length=169, Percent_Identity=31.3609467455621, Blast_Score=87, Evalue=2e-17,
Organism=Escherichia coli, GI1789788, Length=218, Percent_Identity=52.2935779816514, Blast_Score=226, Evalue=1e-60,
Organism=Escherichia coli, GI1790523, Length=211, Percent_Identity=36.4928909952607, Blast_Score=165, Evalue=2e-42,
Organism=Escherichia coli, GI1790754, Length=206, Percent_Identity=33.9805825242718, Blast_Score=112, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI17552948, Length=217, Percent_Identity=40.5529953917051, Blast_Score=156, Evalue=1e-38,
Organism=Saccharomyces cerevisiae, GI6322341, Length=237, Percent_Identity=40.084388185654, Blast_Score=167, Evalue=1e-42,
Organism=Drosophila melanogaster, GI24586301, Length=213, Percent_Identity=37.5586854460094, Blast_Score=151, Evalue=3e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000056
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00834 Ribul_P_3_epim [H]

EC number: =5.1.3.1 [H]

Molecular weight: Translated: 25245; Mature: 25114

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: PS01085 RIBUL_P_3_EPIMER_1 ; PS01086 RIBUL_P_3_EPIMER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQPSAASGQKPIVVAPSILSADFSRLGEEVRAVDEAGADWIHVDVMDGRFVPNITIGPL
CCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEECCCCCHHHH
VVEALRPVTAKPLDVHLMIVEPEKYVADFAKAGADIISVHAESSSTIHLHRTLGQIKDLG
HHHHHCCCCCCCEEEEEEEECCHHHHHHHHHCCCEEEEEECCCCCEEEHHHHHHHHHHHH
KQAGVVLNPASPLELIQYVLDLVDLVLIMSVNPGFGGQSFIPAVVPKIRQLRALCDERGL
HHCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
DPWIEVDGGIKASNAWQVIEAGANAIVAGSAVFKAKDYGEAIRAIRHSRRPELVTV
CCEEEECCCEECCCCHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCEEEC
>Mature Secondary Structure 
TQPSAASGQKPIVVAPSILSADFSRLGEEVRAVDEAGADWIHVDVMDGRFVPNITIGPL
CCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEECCCCCHHHH
VVEALRPVTAKPLDVHLMIVEPEKYVADFAKAGADIISVHAESSSTIHLHRTLGQIKDLG
HHHHHCCCCCCCEEEEEEEECCHHHHHHHHHCCCEEEEEECCCCCEEEHHHHHHHHHHHH
KQAGVVLNPASPLELIQYVLDLVDLVLIMSVNPGFGGQSFIPAVVPKIRQLRALCDERGL
HHCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
DPWIEVDGGIKASNAWQVIEAGANAIVAGSAVFKAKDYGEAIRAIRHSRRPELVTV
CCEEEECCCEECCCCHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231; 9298645 [H]