| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86604797
Identifier: 86604797
GI number: 86604797
Start: 62514
End: 63257
Strand: Reverse
Name: 86604797
Synonym: CYA_0065
Alternate gene names: NA
Gene position: 63257-62514 (Counterclockwise)
Preceding gene: 86604798
Following gene: 86604796
Centisome position: 2.16
GC content: 58.2
Gene sequence:
>744_bases GTGACTCCCACTCCCCCTGCCCTGAGCGGCTACTGGCAAAATGGCTTCGACCTGGAAGCTCACTTGGGATCCTTTCTCGG CCTCAAGGCCGCCGAGCTGCGGGAGAAGCTGCGGCTTGGCCAGCAACAGTTGGCAGAGCTGGGCCGGCGCGACTTCATCT GGGATCAGGCGGAGATCTTTTACCGGGATCGGGTGGGATCCGCCTATTTGCTGGACTTGGCAGCTTGGCACCTGAGCAGC ACCGACTACATCGGCGATACCCTGCGCCTGGTGGCCGACCATGCCCGTGGGCGGGTGTTGGATTTTGGCGGCGGCATCGG CACCCACGCCATTGGGGCGGCCCTCTGCCCGGCGGTGGAGCAGGTGATCTTCTGGGATATCAACCCCATCCATCGGCAGT TTGTGCAACTGCGGGCGGAAAAGCTGGGCCTAAGCGAACGCATCCACTGTCCAGACACCTTCCCGGAAGGGATCCGTTTT GACACCGTCATCTGCTTCGATGTGGTGGAACATTTGCCGGATCCGGCGGCGCAGTTGCGGCAATTTGACGACTGGCTCCA GCCGGCAGGTAAGCTCTTGATTAACTGGTATTTTTTCAAGGGGTTTAAAGGCGAATTTCCCTTTCATCTCGACGATTCAC AGCGGATCGAGGAGTTCTTTCAGGTGTTACAAAGCCATTTCTTAGAAGTGTTTCACCCCTATTTGATTACTGCCCGCTGC TACCGCAAGTGGAATGAACGCTGA
Upstream 100 bases:
>100_bases AGAAACCTTGAAAGAGACGCCCAGAGAGAACGACGACTTCACCGCCGCTTGATGGCGTGAATGGTTTTCAATCCAACCCC CTGCCGAGTTTTGGGTTCCC
Downstream 100 bases:
>100_bases GATGGGAGAAAACCCAAGTGCTGCGCTATTTGCAGGTGTTGTGGTTGTTTTGGAGCACTTCTGTAGCTGCAGAAATGGAG TACCGGGCCAATTTTGTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 247; Mature: 246
Protein sequence:
>247_residues MTPTPPALSGYWQNGFDLEAHLGSFLGLKAAELREKLRLGQQQLAELGRRDFIWDQAEIFYRDRVGSAYLLDLAAWHLSS TDYIGDTLRLVADHARGRVLDFGGGIGTHAIGAALCPAVEQVIFWDINPIHRQFVQLRAEKLGLSERIHCPDTFPEGIRF DTVICFDVVEHLPDPAAQLRQFDDWLQPAGKLLINWYFFKGFKGEFPFHLDDSQRIEEFFQVLQSHFLEVFHPYLITARC YRKWNER
Sequences:
>Translated_247_residues MTPTPPALSGYWQNGFDLEAHLGSFLGLKAAELREKLRLGQQQLAELGRRDFIWDQAEIFYRDRVGSAYLLDLAAWHLSS TDYIGDTLRLVADHARGRVLDFGGGIGTHAIGAALCPAVEQVIFWDINPIHRQFVQLRAEKLGLSERIHCPDTFPEGIRF DTVICFDVVEHLPDPAAQLRQFDDWLQPAGKLLINWYFFKGFKGEFPFHLDDSQRIEEFFQVLQSHFLEVFHPYLITARC YRKWNER >Mature_246_residues TPTPPALSGYWQNGFDLEAHLGSFLGLKAAELREKLRLGQQQLAELGRRDFIWDQAEIFYRDRVGSAYLLDLAAWHLSST DYIGDTLRLVADHARGRVLDFGGGIGTHAIGAALCPAVEQVIFWDINPIHRQFVQLRAEKLGLSERIHCPDTFPEGIRFD TVICFDVVEHLPDPAAQLRQFDDWLQPAGKLLINWYFFKGFKGEFPFHLDDSQRIEEFFQVLQSHFLEVFHPYLITARCY RKWNER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28536; Mature: 28405
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPTPPALSGYWQNGFDLEAHLGSFLGLKAAELREKLRLGQQQLAELGRRDFIWDQAEIF CCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHH YRDRVGSAYLLDLAAWHLSSTDYIGDTLRLVADHARGRVLDFGGGIGTHAIGAALCPAVE HHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHH QVIFWDINPIHRQFVQLRAEKLGLSERIHCPDTFPEGIRFDTVICFDVVEHLPDPAAQLR HHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHH QFDDWLQPAGKLLINWYFFKGFKGEFPFHLDDSQRIEEFFQVLQSHFLEVFHPYLITARC HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH YRKWNER HHHHCCC >Mature Secondary Structure TPTPPALSGYWQNGFDLEAHLGSFLGLKAAELREKLRLGQQQLAELGRRDFIWDQAEIF CCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHH YRDRVGSAYLLDLAAWHLSSTDYIGDTLRLVADHARGRVLDFGGGIGTHAIGAALCPAVE HHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHH QVIFWDINPIHRQFVQLRAEKLGLSERIHCPDTFPEGIRFDTVICFDVVEHLPDPAAQLR HHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHH QFDDWLQPAGKLLINWYFFKGFKGEFPFHLDDSQRIEEFFQVLQSHFLEVFHPYLITARC HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH YRKWNER HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA