Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is 86604797

Identifier: 86604797

GI number: 86604797

Start: 62514

End: 63257

Strand: Reverse

Name: 86604797

Synonym: CYA_0065

Alternate gene names: NA

Gene position: 63257-62514 (Counterclockwise)

Preceding gene: 86604798

Following gene: 86604796

Centisome position: 2.16

GC content: 58.2

Gene sequence:

>744_bases
GTGACTCCCACTCCCCCTGCCCTGAGCGGCTACTGGCAAAATGGCTTCGACCTGGAAGCTCACTTGGGATCCTTTCTCGG
CCTCAAGGCCGCCGAGCTGCGGGAGAAGCTGCGGCTTGGCCAGCAACAGTTGGCAGAGCTGGGCCGGCGCGACTTCATCT
GGGATCAGGCGGAGATCTTTTACCGGGATCGGGTGGGATCCGCCTATTTGCTGGACTTGGCAGCTTGGCACCTGAGCAGC
ACCGACTACATCGGCGATACCCTGCGCCTGGTGGCCGACCATGCCCGTGGGCGGGTGTTGGATTTTGGCGGCGGCATCGG
CACCCACGCCATTGGGGCGGCCCTCTGCCCGGCGGTGGAGCAGGTGATCTTCTGGGATATCAACCCCATCCATCGGCAGT
TTGTGCAACTGCGGGCGGAAAAGCTGGGCCTAAGCGAACGCATCCACTGTCCAGACACCTTCCCGGAAGGGATCCGTTTT
GACACCGTCATCTGCTTCGATGTGGTGGAACATTTGCCGGATCCGGCGGCGCAGTTGCGGCAATTTGACGACTGGCTCCA
GCCGGCAGGTAAGCTCTTGATTAACTGGTATTTTTTCAAGGGGTTTAAAGGCGAATTTCCCTTTCATCTCGACGATTCAC
AGCGGATCGAGGAGTTCTTTCAGGTGTTACAAAGCCATTTCTTAGAAGTGTTTCACCCCTATTTGATTACTGCCCGCTGC
TACCGCAAGTGGAATGAACGCTGA

Upstream 100 bases:

>100_bases
AGAAACCTTGAAAGAGACGCCCAGAGAGAACGACGACTTCACCGCCGCTTGATGGCGTGAATGGTTTTCAATCCAACCCC
CTGCCGAGTTTTGGGTTCCC

Downstream 100 bases:

>100_bases
GATGGGAGAAAACCCAAGTGCTGCGCTATTTGCAGGTGTTGTGGTTGTTTTGGAGCACTTCTGTAGCTGCAGAAATGGAG
TACCGGGCCAATTTTGTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MTPTPPALSGYWQNGFDLEAHLGSFLGLKAAELREKLRLGQQQLAELGRRDFIWDQAEIFYRDRVGSAYLLDLAAWHLSS
TDYIGDTLRLVADHARGRVLDFGGGIGTHAIGAALCPAVEQVIFWDINPIHRQFVQLRAEKLGLSERIHCPDTFPEGIRF
DTVICFDVVEHLPDPAAQLRQFDDWLQPAGKLLINWYFFKGFKGEFPFHLDDSQRIEEFFQVLQSHFLEVFHPYLITARC
YRKWNER

Sequences:

>Translated_247_residues
MTPTPPALSGYWQNGFDLEAHLGSFLGLKAAELREKLRLGQQQLAELGRRDFIWDQAEIFYRDRVGSAYLLDLAAWHLSS
TDYIGDTLRLVADHARGRVLDFGGGIGTHAIGAALCPAVEQVIFWDINPIHRQFVQLRAEKLGLSERIHCPDTFPEGIRF
DTVICFDVVEHLPDPAAQLRQFDDWLQPAGKLLINWYFFKGFKGEFPFHLDDSQRIEEFFQVLQSHFLEVFHPYLITARC
YRKWNER
>Mature_246_residues
TPTPPALSGYWQNGFDLEAHLGSFLGLKAAELREKLRLGQQQLAELGRRDFIWDQAEIFYRDRVGSAYLLDLAAWHLSST
DYIGDTLRLVADHARGRVLDFGGGIGTHAIGAALCPAVEQVIFWDINPIHRQFVQLRAEKLGLSERIHCPDTFPEGIRFD
TVICFDVVEHLPDPAAQLRQFDDWLQPAGKLLINWYFFKGFKGEFPFHLDDSQRIEEFFQVLQSHFLEVFHPYLITARCY
RKWNER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28536; Mature: 28405

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHCCC
>Mature Secondary Structure 
TPTPPALSGYWQNGFDLEAHLGSFLGLKAAELREKLRLGQQQLAELGRRDFIWDQAEIF
CCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHH
YRDRVGSAYLLDLAAWHLSSTDYIGDTLRLVADHARGRVLDFGGGIGTHAIGAALCPAVE
HHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHH
QVIFWDINPIHRQFVQLRAEKLGLSERIHCPDTFPEGIRFDTVICFDVVEHLPDPAAQLR
HHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHH
QFDDWLQPAGKLLINWYFFKGFKGEFPFHLDDSQRIEEFFQVLQSHFLEVFHPYLITARC
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YRKWNER
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA