Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is 86604781

Identifier: 86604781

GI number: 86604781

Start: 48013

End: 48570

Strand: Reverse

Name: 86604781

Synonym: CYA_0049

Alternate gene names: NA

Gene position: 48570-48013 (Counterclockwise)

Preceding gene: 86604783

Following gene: 86604779

Centisome position: 1.66

GC content: 56.09

Gene sequence:

>558_bases
ATGGGCAGTTTGCTCACCGATCTGTTGCGGGTGGAAGAAGGGATCTACATCGTCAAAGCCCAGGTGGTGGTCAACAACAC
GGTTCTGGGCAGTGGTATTGCCGGCTCCAACACAGTAGAAGAAGCAGAAGATGCTGCGCTGAAGCGCGCTTTAAACCACG
CAGGATTCGGTCATTCCACAACTTCCCTGAGCTTGGGGGTGGATTCTGCTGCCGCCAGGATGCCCTACCTGCCCACTCCT
GACTTGGCCAATGGGCGCACCCACTCTTCTGCTGCCCCTCAAGCTCCTGAGTCGATAGGGATCCCGGCGAAGCCGACTTC
CCCAGAGTTGCCCAATCTGAGCGAGCCAGGGGCCTATGGAGATGATTTATCCGACATCATTGCTCAAACAGATGTCGAGA
TGCAGCGTATTGGCTGGGGCCGCAAGGAAGGACAAGAGTTCTTGGAGCGTCGCTTCCAAAAAAAGTCGCGCCACCAACTA
AATGAGGCCGAACTGCGGGAGTTCTTGCGCTATTTAAAACAGCAGCCGTCCCGCCTCAACAGCGAGCCCCGTTTTTGA

Upstream 100 bases:

>100_bases
CTGGATGCCAAGTTAACTTTCGGGCTAACTTGTAGTCAGAGCTTCAGCAGCAACAGGTTCTGACGCCAACATGATCCAAG
ACTTTCGAGAGCGGTACCCT

Downstream 100 bases:

>100_bases
CTTTTCCAGACTCCCTCGCTCCCGGCCCCTCTCCCAGAGGGAGTCCCCCCTCACCCCCAGCCCCTCTCCCAGAGGGAGAG
GGGAGTTAGACTTGACCTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 184

Protein sequence:

>185_residues
MGSLLTDLLRVEEGIYIVKAQVVVNNTVLGSGIAGSNTVEEAEDAALKRALNHAGFGHSTTSLSLGVDSAAARMPYLPTP
DLANGRTHSSAAPQAPESIGIPAKPTSPELPNLSEPGAYGDDLSDIIAQTDVEMQRIGWGRKEGQEFLERRFQKKSRHQL
NEAELREFLRYLKQQPSRLNSEPRF

Sequences:

>Translated_185_residues
MGSLLTDLLRVEEGIYIVKAQVVVNNTVLGSGIAGSNTVEEAEDAALKRALNHAGFGHSTTSLSLGVDSAAARMPYLPTP
DLANGRTHSSAAPQAPESIGIPAKPTSPELPNLSEPGAYGDDLSDIIAQTDVEMQRIGWGRKEGQEFLERRFQKKSRHQL
NEAELREFLRYLKQQPSRLNSEPRF
>Mature_184_residues
GSLLTDLLRVEEGIYIVKAQVVVNNTVLGSGIAGSNTVEEAEDAALKRALNHAGFGHSTTSLSLGVDSAAARMPYLPTPD
LANGRTHSSAAPQAPESIGIPAKPTSPELPNLSEPGAYGDDLSDIIAQTDVEMQRIGWGRKEGQEFLERRFQKKSRHQLN
EAELREFLRYLKQQPSRLNSEPRF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20180; Mature: 20049

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSLLTDLLRVEEGIYIVKAQVVVNNTVLGSGIAGSNTVEEAEDAALKRALNHAGFGHST
CCHHHHHHHHHHCCEEEEEEEEEECCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
TSLSLGVDSAAARMPYLPTPDLANGRTHSSAAPQAPESIGIPAKPTSPELPNLSEPGAYG
CEEECCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DDLSDIIAQTDVEMQRIGWGRKEGQEFLERRFQKKSRHQLNEAELREFLRYLKQQPSRLN
CCHHHHHHHHCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHCC
SEPRF
CCCCC
>Mature Secondary Structure 
GSLLTDLLRVEEGIYIVKAQVVVNNTVLGSGIAGSNTVEEAEDAALKRALNHAGFGHST
CHHHHHHHHHHCCEEEEEEEEEECCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
TSLSLGVDSAAARMPYLPTPDLANGRTHSSAAPQAPESIGIPAKPTSPELPNLSEPGAYG
CEEECCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DDLSDIIAQTDVEMQRIGWGRKEGQEFLERRFQKKSRHQLNEAELREFLRYLKQQPSRLN
CCHHHHHHHHCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHCC
SEPRF
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8467083; 8905231 [H]