| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86604781
Identifier: 86604781
GI number: 86604781
Start: 48013
End: 48570
Strand: Reverse
Name: 86604781
Synonym: CYA_0049
Alternate gene names: NA
Gene position: 48570-48013 (Counterclockwise)
Preceding gene: 86604783
Following gene: 86604779
Centisome position: 1.66
GC content: 56.09
Gene sequence:
>558_bases ATGGGCAGTTTGCTCACCGATCTGTTGCGGGTGGAAGAAGGGATCTACATCGTCAAAGCCCAGGTGGTGGTCAACAACAC GGTTCTGGGCAGTGGTATTGCCGGCTCCAACACAGTAGAAGAAGCAGAAGATGCTGCGCTGAAGCGCGCTTTAAACCACG CAGGATTCGGTCATTCCACAACTTCCCTGAGCTTGGGGGTGGATTCTGCTGCCGCCAGGATGCCCTACCTGCCCACTCCT GACTTGGCCAATGGGCGCACCCACTCTTCTGCTGCCCCTCAAGCTCCTGAGTCGATAGGGATCCCGGCGAAGCCGACTTC CCCAGAGTTGCCCAATCTGAGCGAGCCAGGGGCCTATGGAGATGATTTATCCGACATCATTGCTCAAACAGATGTCGAGA TGCAGCGTATTGGCTGGGGCCGCAAGGAAGGACAAGAGTTCTTGGAGCGTCGCTTCCAAAAAAAGTCGCGCCACCAACTA AATGAGGCCGAACTGCGGGAGTTCTTGCGCTATTTAAAACAGCAGCCGTCCCGCCTCAACAGCGAGCCCCGTTTTTGA
Upstream 100 bases:
>100_bases CTGGATGCCAAGTTAACTTTCGGGCTAACTTGTAGTCAGAGCTTCAGCAGCAACAGGTTCTGACGCCAACATGATCCAAG ACTTTCGAGAGCGGTACCCT
Downstream 100 bases:
>100_bases CTTTTCCAGACTCCCTCGCTCCCGGCCCCTCTCCCAGAGGGAGTCCCCCCTCACCCCCAGCCCCTCTCCCAGAGGGAGAG GGGAGTTAGACTTGACCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 185; Mature: 184
Protein sequence:
>185_residues MGSLLTDLLRVEEGIYIVKAQVVVNNTVLGSGIAGSNTVEEAEDAALKRALNHAGFGHSTTSLSLGVDSAAARMPYLPTP DLANGRTHSSAAPQAPESIGIPAKPTSPELPNLSEPGAYGDDLSDIIAQTDVEMQRIGWGRKEGQEFLERRFQKKSRHQL NEAELREFLRYLKQQPSRLNSEPRF
Sequences:
>Translated_185_residues MGSLLTDLLRVEEGIYIVKAQVVVNNTVLGSGIAGSNTVEEAEDAALKRALNHAGFGHSTTSLSLGVDSAAARMPYLPTP DLANGRTHSSAAPQAPESIGIPAKPTSPELPNLSEPGAYGDDLSDIIAQTDVEMQRIGWGRKEGQEFLERRFQKKSRHQL NEAELREFLRYLKQQPSRLNSEPRF >Mature_184_residues GSLLTDLLRVEEGIYIVKAQVVVNNTVLGSGIAGSNTVEEAEDAALKRALNHAGFGHSTTSLSLGVDSAAARMPYLPTPD LANGRTHSSAAPQAPESIGIPAKPTSPELPNLSEPGAYGDDLSDIIAQTDVEMQRIGWGRKEGQEFLERRFQKKSRHQLN EAELREFLRYLKQQPSRLNSEPRF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20180; Mature: 20049
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSLLTDLLRVEEGIYIVKAQVVVNNTVLGSGIAGSNTVEEAEDAALKRALNHAGFGHST CCHHHHHHHHHHCCEEEEEEEEEECCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC TSLSLGVDSAAARMPYLPTPDLANGRTHSSAAPQAPESIGIPAKPTSPELPNLSEPGAYG CEEECCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DDLSDIIAQTDVEMQRIGWGRKEGQEFLERRFQKKSRHQLNEAELREFLRYLKQQPSRLN CCHHHHHHHHCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHCC SEPRF CCCCC >Mature Secondary Structure GSLLTDLLRVEEGIYIVKAQVVVNNTVLGSGIAGSNTVEEAEDAALKRALNHAGFGHST CHHHHHHHHHHCCEEEEEEEEEECCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC TSLSLGVDSAAARMPYLPTPDLANGRTHSSAAPQAPESIGIPAKPTSPELPNLSEPGAYG CEEECCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DDLSDIIAQTDVEMQRIGWGRKEGQEFLERRFQKKSRHQLNEAELREFLRYLKQQPSRLN CCHHHHHHHHCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHCC SEPRF CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8467083; 8905231 [H]