| Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
|---|---|
| Accession | NC_007766 |
| Length | 642,517 |
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The map label for this gene is entA [C]
Identifier: 86361287
GI number: 86361287
Start: 625079
End: 625801
Strand: Reverse
Name: entA [C]
Synonym: RHE_PF00559
Alternate gene names: 86361287
Gene position: 625801-625079 (Counterclockwise)
Preceding gene: 86361289
Following gene: 86361286
Centisome position: 97.4
GC content: 64.04
Gene sequence:
>723_bases ATGCAGGCGAATATCGATCTTCAAGGACTTCGCGTAGGGATCACCGGCGGCACTTCCGGCCTCGGACTGGCGCTTGTGCG GCAGCTTGCCGAGAAGGGTGCGAGCGTTGCCTTCGTCGCCCGCACCGCCGCCAATGTCGAACGCATCGCAGCCGAGACGG GCGCGTTTGGCATTGTCGCCGATATCGGCAAGAAGGAAGACATCTATCCGATCGCGATGCAGATCAGTGCCAATCTTGGC GGCGTCGACGTCCTGATCAACAATGCATCGAGCCTCGGTCCTGTGCCTCTGGCGCTTCTTGCCGACACGGACTGCGAGGA GCTGGAAGCGGCCCTCGTAGTCAACGTTCTCGGCGCCTTCCGGCTGACGAAAGCCCTGTTCGGTGCGCTTGCCACGTCGG CGCGCGAGGGCCGCGGCGCGCTGGTGATCAACATCTCCAGCGACGCGGCGGTCAACGCCTATCCCGGCTGGGGCGCATAC GGCGCGAGCAAGGCAGCGCTTGCCCATCTGACGGCGATTTGGGACGCGGAGGCGAAAGGAGATGGAATAAGGTTTCTTGC CCCCGATCCTGGCGACATGGACACCCCGCTGCACGCGCTGGCGCTACCGGACGCCGATCGGTCGGCCTTGAAATATCCGA AGCTGGCCGCTGCCGAAATCATCGAGAAGATGCTCGACGCGTTGCCGAGTCACGATGCGCTTACCGCCGGAGCCCACGCG TGA
Upstream 100 bases:
>100_bases CAGCATCGGATCCATGCATAAATAAAAGCACGAAGCTCTCTTAACTTCAAGTTAACTTGAACTTGTAGCAGTTAGGCGTA CCCATTGAAGGAGCACCGCA
Downstream 100 bases:
>100_bases TCGCCGCTGATCGCCTCGATCGGCAATCGGCCAGGCTGCTCGTCGTGGAGGCGGACGGCAGGATGCGCGACCTGCCGCGG GCTAACCTCGGGATGTTATT
Product: putative short chain dehydrogenase protein
Products: 2,3-Dihydroxybenzoate; H+; Nicotinamide adenine dinucleotide - reduced [C]
Alternate protein names: NA
Number of amino acids: Translated: 240; Mature: 240
Protein sequence:
>240_residues MQANIDLQGLRVGITGGTSGLGLALVRQLAEKGASVAFVARTAANVERIAAETGAFGIVADIGKKEDIYPIAMQISANLG GVDVLINNASSLGPVPLALLADTDCEELEAALVVNVLGAFRLTKALFGALATSAREGRGALVINISSDAAVNAYPGWGAY GASKAALAHLTAIWDAEAKGDGIRFLAPDPGDMDTPLHALALPDADRSALKYPKLAAAEIIEKMLDALPSHDALTAGAHA
Sequences:
>Translated_240_residues MQANIDLQGLRVGITGGTSGLGLALVRQLAEKGASVAFVARTAANVERIAAETGAFGIVADIGKKEDIYPIAMQISANLG GVDVLINNASSLGPVPLALLADTDCEELEAALVVNVLGAFRLTKALFGALATSAREGRGALVINISSDAAVNAYPGWGAY GASKAALAHLTAIWDAEAKGDGIRFLAPDPGDMDTPLHALALPDADRSALKYPKLAAAEIIEKMLDALPSHDALTAGAHA >Mature_240_residues MQANIDLQGLRVGITGGTSGLGLALVRQLAEKGASVAFVARTAANVERIAAETGAFGIVADIGKKEDIYPIAMQISANLG GVDVLINNASSLGPVPLALLADTDCEELEAALVVNVLGAFRLTKALFGALATSAREGRGALVINISSDAAVNAYPGWGAY GASKAALAHLTAIWDAEAKGDGIRFLAPDPGDMDTPLHALALPDADRSALKYPKLAAAEIIEKMLDALPSHDALTAGAHA
Specific function: Siderophore biosynthesis; enterobactin biosynthesis. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI32483357, Length=230, Percent_Identity=29.1304347826087, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI5031737, Length=200, Percent_Identity=33.5, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI33667109, Length=187, Percent_Identity=33.1550802139037, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI4503817, Length=201, Percent_Identity=26.3681592039801, Blast_Score=65, Evalue=7e-11, Organism=Escherichia coli, GI1786812, Length=195, Percent_Identity=29.7435897435897, Blast_Score=65, Evalue=5e-12, Organism=Escherichia coli, GI87082100, Length=196, Percent_Identity=27.5510204081633, Blast_Score=62, Evalue=5e-11, Organism=Escherichia coli, GI1787335, Length=226, Percent_Identity=29.2035398230088, Blast_Score=61, Evalue=7e-11, Organism=Caenorhabditis elegans, GI17538182, Length=216, Percent_Identity=33.7962962962963, Blast_Score=88, Evalue=5e-18, Organism=Saccharomyces cerevisiae, GI6322227, Length=192, Percent_Identity=31.25, Blast_Score=77, Evalue=2e-15, Organism=Drosophila melanogaster, GI23397609, Length=188, Percent_Identity=38.8297872340425, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI24644339, Length=222, Percent_Identity=28.8288288288288, Blast_Score=81, Evalue=6e-16, Organism=Drosophila melanogaster, GI17737361, Length=205, Percent_Identity=29.2682926829268, Blast_Score=71, Evalue=6e-13, Organism=Drosophila melanogaster, GI24641232, Length=232, Percent_Identity=27.1551724137931, Blast_Score=70, Evalue=9e-13, Organism=Drosophila melanogaster, GI28571526, Length=213, Percent_Identity=29.1079812206573, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI21357041, Length=191, Percent_Identity=29.3193717277487, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI116007236, Length=206, Percent_Identity=27.6699029126214, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI21355319, Length=232, Percent_Identity=27.5862068965517, Blast_Score=64, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: 1.3.1.28 [C]
Molecular weight: Translated: 24474; Mature: 24474
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQANIDLQGLRVGITGGTSGLGLALVRQLAEKGASVAFVARTAANVERIAAETGAFGIVA CCCCCEECEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCEEEE DIGKKEDIYPIAMQISANLGGVDVLINNASSLGPVPLALLADTDCEELEAALVVNVLGAF CCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHH RLTKALFGALATSAREGRGALVINISSDAAVNAYPGWGAYGASKAALAHLTAIWDAEAKG HHHHHHHHHHHHCCCCCCCEEEEEECCCCEEECCCCCCCCCCHHHHHHHHHHHHCCCCCC DGIRFLAPDPGDMDTPLHALALPDADRSALKYPKLAAAEIIEKMLDALPSHDALTAGAHA CCEEEECCCCCCCCCCEEEEECCCCCHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MQANIDLQGLRVGITGGTSGLGLALVRQLAEKGASVAFVARTAANVERIAAETGAFGIVA CCCCCEECEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCEEEE DIGKKEDIYPIAMQISANLGGVDVLINNASSLGPVPLALLADTDCEELEAALVVNVLGAF CCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHH RLTKALFGALATSAREGRGALVINISSDAAVNAYPGWGAYGASKAALAHLTAIWDAEAKG HHHHHHHHHHHHCCCCCCCEEEEEECCCCEEECCCCCCCCCCHHHHHHHHHHHHCCCCCC DGIRFLAPDPGDMDTPLHALALPDADRSALKYPKLAAAEIIEKMLDALPSHDALTAGAHA CCEEEECCCCCCCCCCEEEEECCCCCHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NAD+ [C]
Metal ions: NA
Kcat value (1/min): 5550 [C]
Specific activity: 66
Km value (mM): 0.26 {methyl-2,3-dehydro-3-hydroxybenzoate}} 0.2 {3-oxocyclohexane-1-carboxylic} 0.3 {2,3-dihydro-2,3-dihydroxybenzoate}} [C]
Substrates: 2,3-Dihydro-2,3-dihydroxybenzoate; Nicotinamide adenine dinucleotide [C]
Specific reaction: 2,3-Dihydro-2,3-dihydroxybenzoate + Nicotinamide adenine dinucleotide <==> 2,3-Dihydroxybenzoate + H+ + Nicotinamide adenine dinucleotide - reduced [C]
General reaction: Redox reaction [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]