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The map label for this gene is ydeP [H]

Identifier: 86361280

GI number: 86361280

Start: 617970

End: 618770

Strand: Reverse

Name: ydeP [H]

Synonym: RHE_PF00552

Alternate gene names: 86361280

Gene position: 618770-617970 (Counterclockwise)

Preceding gene: 86361282

Following gene: 86361279

Centisome position: 96.3

GC content: 57.18

Gene sequence:

>801_bases
ATGTCATCTTCACGCGCCACGATCCAAACCCTGCCTGGGCCGTTGAGCCCTGCAGGAGGCTGTAGATCTTCCGGAAGCGC
CCGCATATACCACTTGCTGGACGCTGCCAACAAGGCAGTGTTTCTGGCTTCAGGTCGTATTTCGCGGCCGGCTCATCTGC
ATCCACGCCTTCGTCCCATATGCCGAAAGAGGAGCCGGCAAAAACACCTCTTCGCCCTTAAAACCGTCTTGGACGAAAAT
ACTGACTCCATCCCAAAATATCGATTCCGGCAACAACATGGTGGTCAGCGTCTATTATGCTACGGCCAAGACTGTGACAA
TGAAAATCGAACAAGAGGAAATGTCGCGGCCTCATTCCGCCGCTGGAACACGGAAAACGGCAAGGCCAATTTTCTCGTGT
CGGCGGGCCTCGACGAAGATCCTCTGCTCGACAATCCCGATGCCCTTGTCCTCACCACGATCCGCAGCCATGACCAATAT
AATACGACCATATACGGGCTCGACGATCGCTATCGCGGGGTCTTCGGCCGGCGCGACGTAATCTTCATGAACAGGGGCGA
TCTGGCGCGCCGCGGCCTGAAGGATGGCGACCGCATCGACATTCGCGGACTTGCCGGACAAGACGAGACCGAGCGCGTCG
TGCGGGGATTTACCGCCGTTGCCTACGACATTCCAAGCGGTTCCGTTGCCGGATATTATCCTGAAATGAATGTCGTCGTA
GCGCTCGACCACTACGACCATCTTTCCGGCACGCCGTCCTACAAGGGTGTGCCGATCACGGTGGCGGCCGCCGAGATGTA
A

Upstream 100 bases:

>100_bases
CCAAGACTGCTCTTAGTGCGCCATACCGCCACTCTGGCCGGATAGAGTAACTTTTCAATCCTCGACATATTCACACGCGA
GCAAGGTCTTTCCCGCAAGG

Downstream 100 bases:

>100_bases
CAGGGCATGCCGCATGCATTGGCGACCATGCGGCATTGCCATTGCATGAGGCAATGGTCGCAACGGCATTCGCCACGGCA
CTGCTTCTGACTTCCTCGGA

Product: putative formate dehydrogenase oxidoreductase protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 265

Protein sequence:

>266_residues
MSSSRATIQTLPGPLSPAGGCRSSGSARIYHLLDAANKAVFLASGRISRPAHLHPRLRPICRKRSRQKHLFALKTVLDEN
TDSIPKYRFRQQHGGQRLLCYGQDCDNENRTRGNVAASFRRWNTENGKANFLVSAGLDEDPLLDNPDALVLTTIRSHDQY
NTTIYGLDDRYRGVFGRRDVIFMNRGDLARRGLKDGDRIDIRGLAGQDETERVVRGFTAVAYDIPSGSVAGYYPEMNVVV
ALDHYDHLSGTPSYKGVPITVAAAEM

Sequences:

>Translated_266_residues
MSSSRATIQTLPGPLSPAGGCRSSGSARIYHLLDAANKAVFLASGRISRPAHLHPRLRPICRKRSRQKHLFALKTVLDEN
TDSIPKYRFRQQHGGQRLLCYGQDCDNENRTRGNVAASFRRWNTENGKANFLVSAGLDEDPLLDNPDALVLTTIRSHDQY
NTTIYGLDDRYRGVFGRRDVIFMNRGDLARRGLKDGDRIDIRGLAGQDETERVVRGFTAVAYDIPSGSVAGYYPEMNVVV
ALDHYDHLSGTPSYKGVPITVAAAEM
>Mature_265_residues
SSSRATIQTLPGPLSPAGGCRSSGSARIYHLLDAANKAVFLASGRISRPAHLHPRLRPICRKRSRQKHLFALKTVLDENT
DSIPKYRFRQQHGGQRLLCYGQDCDNENRTRGNVAASFRRWNTENGKANFLVSAGLDEDPLLDNPDALVLTTIRSHDQYN
TTIYGLDDRYRGVFGRRDVIFMNRGDLARRGLKDGDRIDIRGLAGQDETERVVRGFTAVAYDIPSGSVAGYYPEMNVVVA
LDHYDHLSGTPSYKGVPITVAAAEM

Specific function: Probably involved in acid resistance [H]

COG id: COG0243

COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787778, Length=148, Percent_Identity=47.2972972972973, Blast_Score=138, Evalue=3e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009010
- InterPro:   IPR006657
- InterPro:   IPR006656
- InterPro:   IPR010046 [H]

Pfam domain/function: PF00384 Molybdopterin; PF01568 Molydop_binding [H]

EC number: NA

Molecular weight: Translated: 29520; Mature: 29388

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSSRATIQTLPGPLSPAGGCRSSGSARIYHLLDAANKAVFLASGRISRPAHLHPRLRPI
CCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEECCCCCCCCCCCCHHHHH
CRKRSRQKHLFALKTVLDENTDSIPKYRFRQQHGGQRLLCYGQDCDNENRTRGNVAASFR
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCCCCCCEEHHH
RWNTENGKANFLVSAGLDEDPLLDNPDALVLTTIRSHDQYNTTIYGLDDRYRGVFGRRDV
CCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCEEEECCHHHCCCCCCCCE
IFMNRGDLARRGLKDGDRIDIRGLAGQDETERVVRGFTAVAYDIPSGSVAGYYPEMNVVV
EEECCCHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHEEEEEECCCCCEEEECCCCEEEE
ALDHYDHLSGTPSYKGVPITVAAAEM
EEECCCCCCCCCCCCCEEEEEEEECC
>Mature Secondary Structure 
SSSRATIQTLPGPLSPAGGCRSSGSARIYHLLDAANKAVFLASGRISRPAHLHPRLRPI
CCCCCEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEECCCCCCCCCCCCHHHHH
CRKRSRQKHLFALKTVLDENTDSIPKYRFRQQHGGQRLLCYGQDCDNENRTRGNVAASFR
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCCCCCCEEHHH
RWNTENGKANFLVSAGLDEDPLLDNPDALVLTTIRSHDQYNTTIYGLDDRYRGVFGRRDV
CCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCEEEECCHHHCCCCCCCCE
IFMNRGDLARRGLKDGDRIDIRGLAGQDETERVVRGFTAVAYDIPSGSVAGYYPEMNVVV
EEECCCHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHEEEEEECCCCCEEEECCCCEEEE
ALDHYDHLSGTPSYKGVPITVAAAEM
EEECCCCCCCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]