Definition Rhizobium etli CFN 42 plasmid p42f, complete sequence.
Accession NC_007766
Length 642,517

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The map label for this gene is 86361272

Identifier: 86361272

GI number: 86361272

Start: 608278

End: 608829

Strand: Direct

Name: 86361272

Synonym: RHE_PF00543

Alternate gene names: NA

Gene position: 608278-608829 (Clockwise)

Preceding gene: 86361271

Following gene: 86361273

Centisome position: 94.67

GC content: 57.97

Gene sequence:

>552_bases
ATGCACAGCATCGAAAACCAGATCGTCGATTCAAGTTTTTCTGCGATCATCAATGCGCCGATCGAACATGTTGATATCCC
GGCATGGTGCTTCGCCCTGCCGGAGAAAGAATATCAGCAGTGCTCCCCAGCGCACATTGCCGCGGGCTTCACCACGGCGC
CTGACGGCACGCGGATGTCGATCAACGTCGAAACGATCGGCGGGAGCCTGATGGTCCAGCACTACATCGAAACGTTGGGG
GAAAAGCACCATCTCGTTCTCGATTCCGATTCCGATGTCTTCACGCCCACTGGCCGCGTTACCATCCACGTCACGTGGGA
GCTGAGCGTGAAGAGAATCGACGCGCAGCGGTGCGAATTCACAAACCGCGTCAGATCCTACGCAACGGACGAGATGATGG
CGTTCCTGGACCGACAGGGCATTCCCTTCGAGGTTTTCCGAACCCAGCGGCAGCCGATGTCCATCGCACACAACAAGGGC
GAAACGCCGCTTTTCGCCGCAAGCATTGAACGCGCTGCCCTGCGCAACGCCTCTTCGATCAAGGCAGCGTGA

Upstream 100 bases:

>100_bases
TAGGCCGAAACGCTGCCCCGCGGCGCTACGACCGCGGGCAGCGGCACCGGGCACGTTCGATTGCCCTGCGCATTACCACT
GACAATTATGGAGACACTAC

Downstream 100 bases:

>100_bases
TTTCCGGGAGGATTACCATGACAGAATTGTCCTACGATTGCAGCAACACGGGATTGATCGTCGTCGATCCCTATAACGAC
TTCATCTCGGAAGGCGGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MHSIENQIVDSSFSAIINAPIEHVDIPAWCFALPEKEYQQCSPAHIAAGFTTAPDGTRMSINVETIGGSLMVQHYIETLG
EKHHLVLDSDSDVFTPTGRVTIHVTWELSVKRIDAQRCEFTNRVRSYATDEMMAFLDRQGIPFEVFRTQRQPMSIAHNKG
ETPLFAASIERAALRNASSIKAA

Sequences:

>Translated_183_residues
MHSIENQIVDSSFSAIINAPIEHVDIPAWCFALPEKEYQQCSPAHIAAGFTTAPDGTRMSINVETIGGSLMVQHYIETLG
EKHHLVLDSDSDVFTPTGRVTIHVTWELSVKRIDAQRCEFTNRVRSYATDEMMAFLDRQGIPFEVFRTQRQPMSIAHNKG
ETPLFAASIERAALRNASSIKAA
>Mature_183_residues
MHSIENQIVDSSFSAIINAPIEHVDIPAWCFALPEKEYQQCSPAHIAAGFTTAPDGTRMSINVETIGGSLMVQHYIETLG
EKHHLVLDSDSDVFTPTGRVTIHVTWELSVKRIDAQRCEFTNRVRSYATDEMMAFLDRQGIPFEVFRTQRQPMSIAHNKG
ETPLFAASIERAALRNASSIKAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20402; Mature: 20402

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSIENQIVDSSFSAIINAPIEHVDIPAWCFALPEKEYQQCSPAHIAAGFTTAPDGTRMS
CCCHHHHHHHHHHHHHHCCCHHHCCCCHHEEECCCHHHHHCCCCCEECCCEECCCCCEEE
INVETIGGSLMVQHYIETLGEKHHLVLDSDSDVFTPTGRVTIHVTWELSVKRIDAQRCEF
EEEEECCCHHHHHHHHHHCCCCCEEEEECCCCEECCCCCEEEEEEEEEEEEEHHHHHHHH
TNRVRSYATDEMMAFLDRQGIPFEVFRTQRQPMSIAHNKGETPLFAASIERAALRNASSI
HHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHCCCCCCCCHHHHHHHHHHCCCCCC
KAA
CCC
>Mature Secondary Structure
MHSIENQIVDSSFSAIINAPIEHVDIPAWCFALPEKEYQQCSPAHIAAGFTTAPDGTRMS
CCCHHHHHHHHHHHHHHCCCHHHCCCCHHEEECCCHHHHHCCCCCEECCCEECCCCCEEE
INVETIGGSLMVQHYIETLGEKHHLVLDSDSDVFTPTGRVTIHVTWELSVKRIDAQRCEF
EEEEECCCHHHHHHHHHHCCCCCEEEEECCCCEECCCCCEEEEEEEEEEEEEHHHHHHHH
TNRVRSYATDEMMAFLDRQGIPFEVFRTQRQPMSIAHNKGETPLFAASIERAALRNASSI
HHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHCCCCCCCCHHHHHHHHHHCCCCCC
KAA
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA