| Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
|---|---|
| Accession | NC_007766 |
| Length | 642,517 |
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The map label for this gene is 86361268
Identifier: 86361268
GI number: 86361268
Start: 604549
End: 605847
Strand: Reverse
Name: 86361268
Synonym: RHE_PF00539
Alternate gene names: NA
Gene position: 605847-604549 (Counterclockwise)
Preceding gene: 86361276
Following gene: 86361267
Centisome position: 94.29
GC content: 65.05
Gene sequence:
>1299_bases ATGCCGCTGGTGCCGACTTTCGCGCCAAAGGCACTGGGGAGCTATTGCACCAAGGTGTTGCCGATACCTTTGGATCGGTC GGGGCCGGGAACACCAAGGTGCAATGGACCGGTGAGGGCAAGACGGATATCACCCGCGAGCGCAACGCTTCGAATGGAGT CCGATATGACAGCCTGGCACGACCGTCGCATTCTTGATCTTTTCGGGATTGAACTTCCCATCATCCAGGCGCCGATGGCC GGTGCGACCACGGTCGACATGGTGATAGCGGCTTCCAGGGCCGGTGGTCTCGGCTCGCTGCCGAGCGCGCAATATTCCGT CGAGCAGCTGCGGGAGGTGCTTCGGCGCATCAACCAGGAGACGGCCGCTCCCATCAACGTAAACTTCTTCAGCCATATGA CGCCGGCAGACGATCCGGCCGCCCAGATGAAATGGCGCTCGGCCCTCGCGCCATATTACCGGGAGCTCGGGATCGATCCC GCCGCTCCCGTCTCCGGTTCGGGCCGGGCGCCCTTCGACGATGCGTTCTGCGATGTCGTCGAAGAGTTTCGTCCAGCCGT CGTCAGTTTCCATTTCGGCCTTCCGGAGCCGCGGCTGGTCGAGCGCGTGAGGGCCACCGGCGCCAGGATCATATCCTCGG CGACCATTGTGGAGGAGGCGGTCTGGCTGGAAGCCAACGGTGTCGACGCGGTGATCGCCATGGGCTTCGAGGCCGGCGGC CACCGCGGCAATTTTCTTACGAAGGACATGGCCACGCAGGTCGGGACGATGGCTCTCGTCCCGCAGATCGTCGATGCGGT GCAAGTTCCCGTCATCGCCGCCGGCGGTATCGCCGACGGTCGGGGTGTGGCGGCAGCATGGATGCTCGGCGCGTCAGCAG TTCAGATCGGCACGGCCTATCTCTTCAGCGCCGAAGCGAAGATAGCGGCCGTGCACGCGGCAGCGCTTGGCCACGCAGGC GATGCCAGCACGGCGATCACCAACCTCTTCACCGGGCGGCCGGCACGCGGCGTCGTCAACCGGATCATGCGCGAACTCGG GCCGATTTCCGATGTCGCGCCGCCGTTTCCGACGGCAGGCGCTGCCCTTGCGGCCATCCGGGCCAAAGCGGAGGGCAGGG GGAGCGACGATTTCACCAACCTGTGGGCGGGACAGTCGGCCAGGCTCGCGAAACATCTGCCGGCCGGCGAGCTCACGAGG TCGCTCTTTGACGAGGCCATCGCGGCGCTTGATGCGCATTCGAAAGCCCGCAAAACGCAAATAGCGGTTCCGGTTTTTCC GCCGCCGGCGACACCATAG
Upstream 100 bases:
>100_bases TGCGCGCGAGGCCCCGTCACCAGGTGGGATGAACCGGGCGTCTCACGGGTCGGAAATCTGTCTGAGCGGGCTTGGCCGGA GGGTCCGGCCGTTGATCTTC
Downstream 100 bases:
>100_bases TGCAATGGAACCCATCGTCATTCATGCGCAAGATAGGCGCGTCGAAGGCACGCAATACCACATCTGCTAGCTTCGCCAGC GACCGGAAAGGCGCCGCACG
Product: dioxygenase protein
Products: NA
Alternate protein names: Nitroalkane oxidase [H]
Number of amino acids: Translated: 432; Mature: 431
Protein sequence:
>432_residues MPLVPTFAPKALGSYCTKVLPIPLDRSGPGTPRCNGPVRARRISPASATLRMESDMTAWHDRRILDLFGIELPIIQAPMA GATTVDMVIAASRAGGLGSLPSAQYSVEQLREVLRRINQETAAPINVNFFSHMTPADDPAAQMKWRSALAPYYRELGIDP AAPVSGSGRAPFDDAFCDVVEEFRPAVVSFHFGLPEPRLVERVRATGARIISSATIVEEAVWLEANGVDAVIAMGFEAGG HRGNFLTKDMATQVGTMALVPQIVDAVQVPVIAAGGIADGRGVAAAWMLGASAVQIGTAYLFSAEAKIAAVHAAALGHAG DASTAITNLFTGRPARGVVNRIMRELGPISDVAPPFPTAGAALAAIRAKAEGRGSDDFTNLWAGQSARLAKHLPAGELTR SLFDEAIAALDAHSKARKTQIAVPVFPPPATP
Sequences:
>Translated_432_residues MPLVPTFAPKALGSYCTKVLPIPLDRSGPGTPRCNGPVRARRISPASATLRMESDMTAWHDRRILDLFGIELPIIQAPMA GATTVDMVIAASRAGGLGSLPSAQYSVEQLREVLRRINQETAAPINVNFFSHMTPADDPAAQMKWRSALAPYYRELGIDP AAPVSGSGRAPFDDAFCDVVEEFRPAVVSFHFGLPEPRLVERVRATGARIISSATIVEEAVWLEANGVDAVIAMGFEAGG HRGNFLTKDMATQVGTMALVPQIVDAVQVPVIAAGGIADGRGVAAAWMLGASAVQIGTAYLFSAEAKIAAVHAAALGHAG DASTAITNLFTGRPARGVVNRIMRELGPISDVAPPFPTAGAALAAIRAKAEGRGSDDFTNLWAGQSARLAKHLPAGELTR SLFDEAIAALDAHSKARKTQIAVPVFPPPATP >Mature_431_residues PLVPTFAPKALGSYCTKVLPIPLDRSGPGTPRCNGPVRARRISPASATLRMESDMTAWHDRRILDLFGIELPIIQAPMAG ATTVDMVIAASRAGGLGSLPSAQYSVEQLREVLRRINQETAAPINVNFFSHMTPADDPAAQMKWRSALAPYYRELGIDPA APVSGSGRAPFDDAFCDVVEEFRPAVVSFHFGLPEPRLVERVRATGARIISSATIVEEAVWLEANGVDAVIAMGFEAGGH RGNFLTKDMATQVGTMALVPQIVDAVQVPVIAAGGIADGRGVAAAWMLGASAVQIGTAYLFSAEAKIAAVHAAALGHAGD ASTAITNLFTGRPARGVVNRIMRELGPISDVAPPFPTAGAALAAIRAKAEGRGSDDFTNLWAGQSARLAKHLPAGELTRS LFDEAIAALDAHSKARKTQIAVPVFPPPATP
Specific function: Catalyzes the oxidation of alkyl nitronates to produce the corresponding carbonyl compounds and nitrites [H]
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitronate monooxygenase family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6322609, Length=361, Percent_Identity=29.3628808864266, Blast_Score=141, Evalue=2e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004136 - InterPro: IPR013785 [H]
Pfam domain/function: PF03060 NPD [H]
EC number: =1.13.12.16 [H]
Molecular weight: Translated: 45357; Mature: 45226
Theoretical pI: Translated: 7.67; Mature: 7.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLVPTFAPKALGSYCTKVLPIPLDRSGPGTPRCNGPVRARRISPASATLRMESDMTAWH CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCHHEEEECCCCHHHH DRRILDLFGIELPIIQAPMAGATTVDMVIAASRAGGLGSLPSAQYSVEQLREVLRRINQE CCHHHHHHCCCCCEEECCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH TAAPINVNFFSHMTPADDPAAQMKWRSALAPYYRELGIDPAAPVSGSGRAPFDDAFCDVV HCCCEEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHH EEFRPAVVSFHFGLPEPRLVERVRATGARIISSATIVEEAVWLEANGVDAVIAMGFEAGG HHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEECCCCCC HRGNFLTKDMATQVGTMALVPQIVDAVQVPVIAAGGIADGRGVAAAWMLGASAVQIGTAY CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHH LFSAEAKIAAVHAAALGHAGDASTAITNLFTGRPARGVVNRIMRELGPISDVAPPFPTAG EEECCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCH AALAAIRAKAEGRGSDDFTNLWAGQSARLAKHLPAGELTRSLFDEAIAALDAHSKARKTQ HHHHHHHHHCCCCCCCCHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCE IAVPVFPPPATP EEEECCCCCCCC >Mature Secondary Structure PLVPTFAPKALGSYCTKVLPIPLDRSGPGTPRCNGPVRARRISPASATLRMESDMTAWH CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCHHEEEECCCCHHHH DRRILDLFGIELPIIQAPMAGATTVDMVIAASRAGGLGSLPSAQYSVEQLREVLRRINQE CCHHHHHHCCCCCEEECCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH TAAPINVNFFSHMTPADDPAAQMKWRSALAPYYRELGIDPAAPVSGSGRAPFDDAFCDVV HCCCEEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHH EEFRPAVVSFHFGLPEPRLVERVRATGARIISSATIVEEAVWLEANGVDAVIAMGFEAGG HHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEECCCCCC HRGNFLTKDMATQVGTMALVPQIVDAVQVPVIAAGGIADGRGVAAAWMLGASAVQIGTAY CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHH LFSAEAKIAAVHAAALGHAGDASTAITNLFTGRPARGVVNRIMRELGPISDVAPPFPTAG EEECCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCH AALAAIRAKAEGRGSDDFTNLWAGQSARLAKHLPAGELTRSLFDEAIAALDAHSKARKTQ HHHHHHHHHCCCCCCCCHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCE IAVPVFPPPATP EEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA