| Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
|---|---|
| Accession | NC_007766 |
| Length | 642,517 |
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The map label for this gene is nirV
Identifier: 86361255
GI number: 86361255
Start: 591670
End: 592635
Strand: Direct
Name: nirV
Synonym: RHE_PF00526
Alternate gene names: NA
Gene position: 591670-592635 (Clockwise)
Preceding gene: 86361254
Following gene: 86361256
Centisome position: 92.09
GC content: 61.8
Gene sequence:
>966_bases ATGGCCCGGAACGCAGCGATCGAACCAGTTTCAGGCATTTCCATCACAATTCCTCTTGTGCTGCTCGCGGTGCTTTCGGC CGCGGTTGCGGTGCAATCGGGATTCGTCGCGACGGGCGCTCCTGACATGAGCGTCGCGCCGCCTCAGACAATCGTCATTG CGCCGCACCGTTTCGCTTATCGCGACGCCGCCGAATATTTTCGCAATGGGCTGGCCGTCGACGCGCCCAGGCTCGACATG ACCATGGCTTCGCCGCTCGAAATCATGAAGTACCAGACCACGCTTCGCGATTATGATCGCTGCGTGGCAGACGCCATTTG CGCACCGGCCGAGAACCTGGGCGACACCTCGTCGCGGGAAGTGACACCGGTGACCGGCGTCAGTTATGACGACGCGATCC AATATGCGGCCTGGCTGTCGGATCATACCGATACCGAATGGCGATTGCCGACCGATTTCGAGCTGGCCTATGCCGCCGCC GACCGCTTTCCCGACGACGCTCTCGGCATAGATCCCAATGATCGCAATCCCGCAAACCGCTGGCTCGCCGATTACGAGCG TGAAGCCCGCAGGGCAGCCGCCATCGACCCCCGGCCGCAGCCGCAGGGCTCGTTCGGGATCAGCCAGACCGGTCTGGTGG ATTTTGCCGGAAATGTCTGGGAGTGGACGTCGACCTGCAACAAGCGGGTCGAACTCAGCAAGAAGGACCTCAGCGGTGAC CCTGACTCCAGGAGCTGCGGGATCATGATCGCAGCCGGCAAGCACCGGGCCCCGATGAGCAGTTTCGTTCGAATTCCCAA GGGCGGCGGCTGCTCCGTCGGCAGTCCACCCGACAATCTCGGCTTTCGGCTCGTACGCAGCAGAGGGTTGCTTGAAAGGC TGACAGAGCGGGTAGAAGGCGCAATGACCCATATGTTCGAACCGGCGATGAGCCCCACGGCAGAACAGGATGACGATGAA AGTTGA
Upstream 100 bases:
>100_bases GGCACCGTCGGCAAGCTGACCGGGCGGAGGGGGCGGTGCGCGGGGTCAGGGGCGACCCGCGCACCATTCTCATTTTGGGG GCGCTATTTGCGAAAATATC
Downstream 100 bases:
>100_bases CCGGACGGTTTTGAAAGCGCTGCCGCTCTTTGAACGGATGACGGATACGGATCTCGACGCGATGCTGCAGCATGCCGCAC CGCGCCGCGTCGCGCAGGGT
Product: nitrate reductase protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 321; Mature: 320
Protein sequence:
>321_residues MARNAAIEPVSGISITIPLVLLAVLSAAVAVQSGFVATGAPDMSVAPPQTIVIAPHRFAYRDAAEYFRNGLAVDAPRLDM TMASPLEIMKYQTTLRDYDRCVADAICAPAENLGDTSSREVTPVTGVSYDDAIQYAAWLSDHTDTEWRLPTDFELAYAAA DRFPDDALGIDPNDRNPANRWLADYEREARRAAAIDPRPQPQGSFGISQTGLVDFAGNVWEWTSTCNKRVELSKKDLSGD PDSRSCGIMIAAGKHRAPMSSFVRIPKGGGCSVGSPPDNLGFRLVRSRGLLERLTERVEGAMTHMFEPAMSPTAEQDDDE S
Sequences:
>Translated_321_residues MARNAAIEPVSGISITIPLVLLAVLSAAVAVQSGFVATGAPDMSVAPPQTIVIAPHRFAYRDAAEYFRNGLAVDAPRLDM TMASPLEIMKYQTTLRDYDRCVADAICAPAENLGDTSSREVTPVTGVSYDDAIQYAAWLSDHTDTEWRLPTDFELAYAAA DRFPDDALGIDPNDRNPANRWLADYEREARRAAAIDPRPQPQGSFGISQTGLVDFAGNVWEWTSTCNKRVELSKKDLSGD PDSRSCGIMIAAGKHRAPMSSFVRIPKGGGCSVGSPPDNLGFRLVRSRGLLERLTERVEGAMTHMFEPAMSPTAEQDDDE S >Mature_320_residues ARNAAIEPVSGISITIPLVLLAVLSAAVAVQSGFVATGAPDMSVAPPQTIVIAPHRFAYRDAAEYFRNGLAVDAPRLDMT MASPLEIMKYQTTLRDYDRCVADAICAPAENLGDTSSREVTPVTGVSYDDAIQYAAWLSDHTDTEWRLPTDFELAYAAAD RFPDDALGIDPNDRNPANRWLADYEREARRAAAIDPRPQPQGSFGISQTGLVDFAGNVWEWTSTCNKRVELSKKDLSGDP DSRSCGIMIAAGKHRAPMSSFVRIPKGGGCSVGSPPDNLGFRLVRSRGLLERLTERVEGAMTHMFEPAMSPTAEQDDDES
Specific function: Unknown
COG id: COG1262
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34839; Mature: 34708
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARNAAIEPVSGISITIPLVLLAVLSAAVAVQSGFVATGAPDMSVAPPQTIVIAPHRFAY CCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCEEEECCCHHHH RDAAEYFRNGLAVDAPRLDMTMASPLEIMKYQTTLRDYDRCVADAICAPAENLGDTSSRE HHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCC VTPVTGVSYDDAIQYAAWLSDHTDTEWRLPTDFELAYAAADRFPDDALGIDPNDRNPANR CCCCCCCCHHHHHHHHHHHCCCCCCCEECCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHH WLADYEREARRAAAIDPRPQPQGSFGISQTGLVDFAGNVWEWTSTCNKRVELSKKDLSGD HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCHHHCCCC PDSRSCGIMIAAGKHRAPMSSFVRIPKGGGCSVGSPPDNLGFRLVRSRGLLERLTERVEG CCCCCCCEEEECCCCCCCHHHHEECCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHH AMTHMFEPAMSPTAEQDDDES HHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure ARNAAIEPVSGISITIPLVLLAVLSAAVAVQSGFVATGAPDMSVAPPQTIVIAPHRFAY CCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCEEEECCCHHHH RDAAEYFRNGLAVDAPRLDMTMASPLEIMKYQTTLRDYDRCVADAICAPAENLGDTSSRE HHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCC VTPVTGVSYDDAIQYAAWLSDHTDTEWRLPTDFELAYAAADRFPDDALGIDPNDRNPANR CCCCCCCCHHHHHHHHHHHCCCCCCCEECCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHH WLADYEREARRAAAIDPRPQPQGSFGISQTGLVDFAGNVWEWTSTCNKRVELSKKDLSGD HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCHHHCCCC PDSRSCGIMIAAGKHRAPMSSFVRIPKGGGCSVGSPPDNLGFRLVRSRGLLERLTERVEG CCCCCCCEEEECCCCCCCHHHHEECCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHH AMTHMFEPAMSPTAEQDDDES HHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA