Click here to switch to the map view.

The map label for this gene is yoqW [H]

Identifier: 86361224

GI number: 86361224

Start: 559640

End: 560287

Strand: Reverse

Name: yoqW [H]

Synonym: RHE_PF00495

Alternate gene names: 86361224

Gene position: 560287-559640 (Counterclockwise)

Preceding gene: 86361225

Following gene: 86361223

Centisome position: 87.2

GC content: 55.56

Gene sequence:

>648_bases
TTGGTTGACCGCATCCCTCGATACAACGGCTCACCAAACCAAGTTTATCCGATCATCATCCAAGAAGCAGCGCGGGGAAG
CGGTATCATTGCCCCGGTCTTTGCAATAGCAAAGTGGGGGTTGGTGTCGGCATCTAGAACGCCCAGCGACCGGCGTCTCC
CACTAGTCCACGTCCGCTGCGAAAAGATTGCCTCACACAAACTCGCCGGACCTGTCTACCGGTCTCGCCGCTGTTTGATC
CCAGTCAGCGGATTCTTCGGGTGGAAATCGTTCACCCACAGCCGGCAAAAACAACCCTATGCTATCGCGATGAGGACGGA
CGTTCTGTTTGCTCTTGCCGGTATTTGGGAGGCCTGGCGCCACCCAGTTGGCATCGATATCCGTACCTTCGCCGTCATTA
CCTGCGCGCCGAATGAGATGATGAAGACGCTCGGTGAACGAATGCCAGTTATTCTCCGTCGGAACGATTATGAGCGTTGG
CTATCTCCTGATCCAAACCCATCCGACCTGATGAAGCCATACGAGGCCGAGCTTATGACCATGTGGCCGATCGGCGTGGG
CAACGACAACCTGAAGAATACCGGCCCCGAAATCATCAGCCCGGTTAATTTTGGTGAGCAGCGTCATGTGACTCGTCAGC
TTCGCTGA

Upstream 100 bases:

>100_bases
CCCCATGGAATACGGAATGTGTAGTCGCGTTTATATCAAAGAATCGCTTCACGACCTCGCGCGTAGTTTCCCTTTCGCCG
GGTAAGGCGAGCTTGACGAC

Downstream 100 bases:

>100_bases
TGGGCGCGCAGGTCCGCAGTCCTTCTGCGCCGCCCTCAAAAAAGAAATCGAGGATTATTGACTCCATCGGGCCCGTGAAC
ATAATAAGAACATCGGCGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MVDRIPRYNGSPNQVYPIIIQEAARGSGIIAPVFAIAKWGLVSASRTPSDRRLPLVHVRCEKIASHKLAGPVYRSRRCLI
PVSGFFGWKSFTHSRQKQPYAIAMRTDVLFALAGIWEAWRHPVGIDIRTFAVITCAPNEMMKTLGERMPVILRRNDYERW
LSPDPNPSDLMKPYEAELMTMWPIGVGNDNLKNTGPEIISPVNFGEQRHVTRQLR

Sequences:

>Translated_215_residues
MVDRIPRYNGSPNQVYPIIIQEAARGSGIIAPVFAIAKWGLVSASRTPSDRRLPLVHVRCEKIASHKLAGPVYRSRRCLI
PVSGFFGWKSFTHSRQKQPYAIAMRTDVLFALAGIWEAWRHPVGIDIRTFAVITCAPNEMMKTLGERMPVILRRNDYERW
LSPDPNPSDLMKPYEAELMTMWPIGVGNDNLKNTGPEIISPVNFGEQRHVTRQLR
>Mature_215_residues
MVDRIPRYNGSPNQVYPIIIQEAARGSGIIAPVFAIAKWGLVSASRTPSDRRLPLVHVRCEKIASHKLAGPVYRSRRCLI
PVSGFFGWKSFTHSRQKQPYAIAMRTDVLFALAGIWEAWRHPVGIDIRTFAVITCAPNEMMKTLGERMPVILRRNDYERW
LSPDPNPSDLMKPYEAELMTMWPIGVGNDNLKNTGPEIISPVNFGEQRHVTRQLR

Specific function: Unknown

COG id: COG2135

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0361 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003738 [H]

Pfam domain/function: PF02586 DUF159 [H]

EC number: NA

Molecular weight: Translated: 24434; Mature: 24434

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDRIPRYNGSPNQVYPIIIQEAARGSGIIAPVFAIAKWGLVSASRTPSDRRLPLVHVRC
CCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEHHH
EKIASHKLAGPVYRSRRCLIPVSGFFGWKSFTHSRQKQPYAIAMRTDVLFALAGIWEAWR
HHHHHHHHCCHHHHCCEEEEEECCCCCHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHC
HPVGIDIRTFAVITCAPNEMMKTLGERMPVILRRNDYERWLSPDPNPSDLMKPYEAELMT
CCCCCEEEEEEEEEECCHHHHHHHHHHCCEEEECCCHHHHCCCCCCHHHHCCCCCCCEEE
MWPIGVGNDNLKNTGPEIISPVNFGEQRHVTRQLR
EECCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MVDRIPRYNGSPNQVYPIIIQEAARGSGIIAPVFAIAKWGLVSASRTPSDRRLPLVHVRC
CCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEHHH
EKIASHKLAGPVYRSRRCLIPVSGFFGWKSFTHSRQKQPYAIAMRTDVLFALAGIWEAWR
HHHHHHHHCCHHHHCCEEEEEECCCCCHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHC
HPVGIDIRTFAVITCAPNEMMKTLGERMPVILRRNDYERWLSPDPNPSDLMKPYEAELMT
CCCCCEEEEEEEEEECCHHHHHHHHHHCCEEEECCCHHHHCCCCCCHHHHCCCCCCCEEE
MWPIGVGNDNLKNTGPEIISPVNFGEQRHVTRQLR
EECCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]