Definition Rhizobium etli CFN 42 plasmid p42f, complete sequence.
Accession NC_007766
Length 642,517

Click here to switch to the map view.

The map label for this gene is 86361223

Identifier: 86361223

GI number: 86361223

Start: 558984

End: 559298

Strand: Reverse

Name: 86361223

Synonym: RHE_PF00494

Alternate gene names: NA

Gene position: 559298-558984 (Counterclockwise)

Preceding gene: 86361224

Following gene: 86361222

Centisome position: 87.05

GC content: 57.46

Gene sequence:

>315_bases
ATGCTTGATCGTCTTCAACCAAAAGCCGTTGCCTTCGAAATAGCGTTTAACGACTGGTGGCGGTCGCGACCGGGTTCTTT
CCGAGACGGCATTAGCCCATCGGCTGCACGTGCGTGCTTTCGCGCAGGATATACCGCCGGCAAGCACGTTTCCGAGCGCC
GTTTCGTCTTCAGGGCGGGCCGCATGCGCATCACTGTCTGGGCAACTGGTCCTACGACAGCGAAGGCGAAAGCCGAAATG
GAAGCTGATTTTCGGACAGCAAAGAAGGGGTGGCCCAAACCGAAAGCTGGCTGGCAGCTCCAGGAGATCAAATGA

Upstream 100 bases:

>100_bases
AATGACATCCGCCATCTTCGCTGGCAGCTAGTTTTGACAGAAGGCGCTATGGGCCGAGGCATCACGCGCGGCTGGCGGCC
GAGCTACGAGCGAGACTGAT

Downstream 100 bases:

>100_bases
GTATCACAAACCCCTCAAGCGCATCCGGCGCGAATGTACACTTCGAGCACTATTGCGAGGAAGTCGGCTGCGAGAAATGG
GGCGGCTTCGGTCACAGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MLDRLQPKAVAFEIAFNDWWRSRPGSFRDGISPSAARACFRAGYTAGKHVSERRFVFRAGRMRITVWATGPTTAKAKAEM
EADFRTAKKGWPKPKAGWQLQEIK

Sequences:

>Translated_104_residues
MLDRLQPKAVAFEIAFNDWWRSRPGSFRDGISPSAARACFRAGYTAGKHVSERRFVFRAGRMRITVWATGPTTAKAKAEM
EADFRTAKKGWPKPKAGWQLQEIK
>Mature_104_residues
MLDRLQPKAVAFEIAFNDWWRSRPGSFRDGISPSAARACFRAGYTAGKHVSERRFVFRAGRMRITVWATGPTTAKAKAEM
EADFRTAKKGWPKPKAGWQLQEIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11816; Mature: 11816

Theoretical pI: Translated: 11.58; Mature: 11.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDRLQPKAVAFEIAFNDWWRSRPGSFRDGISPSAARACFRAGYTAGKHVSERRFVFRAG
CCCCCCCCEEEEEEEECCHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHEEEECC
RMRITVWATGPTTAKAKAEMEADFRTAKKGWPKPKAGWQLQEIK
CEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEECCC
>Mature Secondary Structure
MLDRLQPKAVAFEIAFNDWWRSRPGSFRDGISPSAARACFRAGYTAGKHVSERRFVFRAG
CCCCCCCCEEEEEEEECCHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHEEEECC
RMRITVWATGPTTAKAKAEMEADFRTAKKGWPKPKAGWQLQEIK
CEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA