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The map label for this gene is yhcV [H]

Identifier: 86361220

GI number: 86361220

Start: 554583

End: 555260

Strand: Reverse

Name: yhcV [H]

Synonym: RHE_PF00490

Alternate gene names: 86361220

Gene position: 555260-554583 (Counterclockwise)

Preceding gene: 86361222

Following gene: 86361219

Centisome position: 86.42

GC content: 59.44

Gene sequence:

>678_bases
ATGCAAGCAAGGGATATTATGACCACGACTGTGGTTTCGATCAGCCCTGATGTAAGCGTGCGCCATGCGGTCGCAATGAT
GTTGCAAAACCATGTCAGCGGCCTTCCCGTCGTTGACGACCATGGACGCGTCTGCGGCATGGTGACGGAAGGCGATCTGC
TTTTACGCCGAGAAGTACGCTATGCGCCCCGTCCTGCGCGTGCACCGGAACTGATTTCCGAAATCGACCTCGAACGCTAT
ATCGGCAGCAACGGATGGTGCGTCGCTGACGTCATGTCTCAGGACGTGATCGTCGCGCGGCCGGACAGCGAAGTCTCCGA
TATCGCCGAAAGCCTGCAGGTGCACCGCATAAAGCGGCTGCCGATCGTCGAAGACGAACGCCTGGTCGGGATCGTCAGCA
GACGGGATATTTTGCGAGTCATCGCCGAGGCTCCAACGACAATATTGCCGCGAGGCGACGAGGCGATCCGGCTGGCCGTG
CGCACCCGGCTCAGATCGGATCTCGGTCTAACGCCGCAAAAGGTGCATGTATCGGTCCGCAATGGTCAGGTGACGGTCGA
TGGCCAAGTGGAATCCGAGCTCAAGCGCAGAGCGATCAAGGTTCTCGTCGAAGGGCTTGGCGGCATTGCCGGCTATAAGG
ATGGCCTGCTCGTCTCGCCTGCTCACATCCAGGACTGA

Upstream 100 bases:

>100_bases
GCGATGACGGTCATGAACAGTTTGACGAAGATCAAAGCGAACTGTCCGGCTGGCCTCTAGCATGTTCCTCACGATAATCA
TGAGCAGTGAGGCAGCGACC

Downstream 100 bases:

>100_bases
CAGCTCGAGTCGCATTGGCGCGCCGTCATCGCGCCAAGTGACGAGGAGGCTTGCTCGATCTGCCAAGATCGAGCAAGCCG
TCTGTCAACTTCCCTGCTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MQARDIMTTTVVSISPDVSVRHAVAMMLQNHVSGLPVVDDHGRVCGMVTEGDLLLRREVRYAPRPARAPELISEIDLERY
IGSNGWCVADVMSQDVIVARPDSEVSDIAESLQVHRIKRLPIVEDERLVGIVSRRDILRVIAEAPTTILPRGDEAIRLAV
RTRLRSDLGLTPQKVHVSVRNGQVTVDGQVESELKRRAIKVLVEGLGGIAGYKDGLLVSPAHIQD

Sequences:

>Translated_225_residues
MQARDIMTTTVVSISPDVSVRHAVAMMLQNHVSGLPVVDDHGRVCGMVTEGDLLLRREVRYAPRPARAPELISEIDLERY
IGSNGWCVADVMSQDVIVARPDSEVSDIAESLQVHRIKRLPIVEDERLVGIVSRRDILRVIAEAPTTILPRGDEAIRLAV
RTRLRSDLGLTPQKVHVSVRNGQVTVDGQVESELKRRAIKVLVEGLGGIAGYKDGLLVSPAHIQD
>Mature_225_residues
MQARDIMTTTVVSISPDVSVRHAVAMMLQNHVSGLPVVDDHGRVCGMVTEGDLLLRREVRYAPRPARAPELISEIDLERY
IGSNGWCVADVMSQDVIVARPDSEVSDIAESLQVHRIKRLPIVEDERLVGIVSRRDILRVIAEAPTTILPRGDEAIRLAV
RTRLRSDLGLTPQKVHVSVRNGQVTVDGQVESELKRRAIKVLVEGLGGIAGYKDGLLVSPAHIQD

Specific function: Unknown

COG id: COG0517

COG function: function code R; FOG: CBS domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644 [H]

Pfam domain/function: PF00571 CBS [H]

EC number: NA

Molecular weight: Translated: 24739; Mature: 24739

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: PS50914 BON

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQARDIMTTTVVSISPDVSVRHAVAMMLQNHVSGLPVVDDHGRVCGMVTEGDLLLRREVR
CCCCCEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCEECCCCCEEEEEECCCCCEEHHHH
YAPRPARAPELISEIDLERYIGSNGWCVADVMSQDVIVARPDSEVSDIAESLQVHRIKRL
CCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHCC
PIVEDERLVGIVSRRDILRVIAEAPTTILPRGDEAIRLAVRTRLRSDLGLTPQKVHVSVR
CCCCCCHHEEHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEEEE
NGQVTVDGQVESELKRRAIKVLVEGLGGIAGYKDGLLVSPAHIQD
CCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCC
>Mature Secondary Structure
MQARDIMTTTVVSISPDVSVRHAVAMMLQNHVSGLPVVDDHGRVCGMVTEGDLLLRREVR
CCCCCEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCEECCCCCEEEEEECCCCCEEHHHH
YAPRPARAPELISEIDLERYIGSNGWCVADVMSQDVIVARPDSEVSDIAESLQVHRIKRL
CCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHCC
PIVEDERLVGIVSRRDILRVIAEAPTTILPRGDEAIRLAVRTRLRSDLGLTPQKVHVSVR
CCCCCCHHEEHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEEEE
NGQVTVDGQVESELKRRAIKVLVEGLGGIAGYKDGLLVSPAHIQD
CCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969498; 9384377 [H]