| Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
|---|---|
| Accession | NC_007766 |
| Length | 642,517 |
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The map label for this gene is gnl [H]
Identifier: 86361215
GI number: 86361215
Start: 546645
End: 547559
Strand: Direct
Name: gnl [H]
Synonym: RHE_PF00485
Alternate gene names: 86361215
Gene position: 546645-547559 (Clockwise)
Preceding gene: 86361214
Following gene: 86361221
Centisome position: 85.08
GC content: 63.61
Gene sequence:
>915_bases ATGGCCGAGGCCAGCATCTACGAAATCCACGACCCGCGCTTCCGCCAGTTGATCGTCACCAGCGCCGGTCTCGACGAACT CTATTCAGGCTGCCGCTGGGCGGAGGGTCCTGTCTGGTTCAACGATGCCAACCAGCTTCTGTGGAGCGACATCCCCAATC AGCGCATGCTGCGATGGACGCCCGAGGGCGGCGTCTCCATCTACCGGCAGCCATCCAACTTCACCAACGGCCACACGCGC GACCGCCAGGGCCGGCTCGTCTCCTGCGAACATGGCGGGCGCCGGGTCACGCGCACCGAGACCGACGGCTCGATCACCGT GCTCGCCGACCGTTTCGAAGGCGCGCGGCTCAATTCGCCGAACGACGTGGTGGTGAAATCGGACGGCACGGTCTGGTTCA CCGATCCGACGTACGGCATCATGTCGAATTATGAGGGCTATCAGGCCGAGCCCGAGCAGCCGACGCGCAACGTCTATCGG CTCGATCCGGCGACCGGTAAACTTGCGGCCGTCGTCGCGGATTTCATCCAGCCGAACGGCCTCGCTTTCTCGCCTGACGA GACGATCCTCTACGTCGCGGATTCGGCAGCGAGCCACGACGAAAGCCTGCCACGTCACATCCGGGCCTTCGACGTGATCG ATGGCAGCAGGCTCAAAAACGGCCGCGTCTTCTGCCACATCGACAACGGCATTCCGGACGGCATCCGGACCGACGTCAAT GGGAATCTCTGGTCGAGTGCCGGTGACGGCGTGCATTGTTTCGATCGGGCAGGCAAGCTGATCGGCAAGATCCGCGTCCC TCAGACCGTCGCCAACCTCACCTTTGGCGGCCCGGGACGCAACCGCCTGTTCATAGCCGCAACGCGCTCACTCTATTCCG TCTACGTTGCCACGACCGGCGCACAAAGACCGTAA
Upstream 100 bases:
>100_bases GCGCGGGCATCCGCCTCATCATGACCGGCCTCATCATCATCAGCGTGATCATGCTCGCCGGCGGTCGCCGGACCGGCATG CGATAATCAGGAAGACCATC
Downstream 100 bases:
>100_bases GCCGGTGAAGGCCAGGTTCACGGCAACGAATTTGGCCAATCGCTTCTTCTCAGCACTCCTCCCACGATGCTGCGGCAGCT GCCGTCGCAGCTTTTGCGCC
Product: gluconolactonase precursor protein
Products: NA
Alternate protein names: D-glucono-delta-lactone lactonohydrolase [H]
Number of amino acids: Translated: 304; Mature: 303
Protein sequence:
>304_residues MAEASIYEIHDPRFRQLIVTSAGLDELYSGCRWAEGPVWFNDANQLLWSDIPNQRMLRWTPEGGVSIYRQPSNFTNGHTR DRQGRLVSCEHGGRRVTRTETDGSITVLADRFEGARLNSPNDVVVKSDGTVWFTDPTYGIMSNYEGYQAEPEQPTRNVYR LDPATGKLAAVVADFIQPNGLAFSPDETILYVADSAASHDESLPRHIRAFDVIDGSRLKNGRVFCHIDNGIPDGIRTDVN GNLWSSAGDGVHCFDRAGKLIGKIRVPQTVANLTFGGPGRNRLFIAATRSLYSVYVATTGAQRP
Sequences:
>Translated_304_residues MAEASIYEIHDPRFRQLIVTSAGLDELYSGCRWAEGPVWFNDANQLLWSDIPNQRMLRWTPEGGVSIYRQPSNFTNGHTR DRQGRLVSCEHGGRRVTRTETDGSITVLADRFEGARLNSPNDVVVKSDGTVWFTDPTYGIMSNYEGYQAEPEQPTRNVYR LDPATGKLAAVVADFIQPNGLAFSPDETILYVADSAASHDESLPRHIRAFDVIDGSRLKNGRVFCHIDNGIPDGIRTDVN GNLWSSAGDGVHCFDRAGKLIGKIRVPQTVANLTFGGPGRNRLFIAATRSLYSVYVATTGAQRP >Mature_303_residues AEASIYEIHDPRFRQLIVTSAGLDELYSGCRWAEGPVWFNDANQLLWSDIPNQRMLRWTPEGGVSIYRQPSNFTNGHTRD RQGRLVSCEHGGRRVTRTETDGSITVLADRFEGARLNSPNDVVVKSDGTVWFTDPTYGIMSNYEGYQAEPEQPTRNVYRL DPATGKLAAVVADFIQPNGLAFSPDETILYVADSAASHDESLPRHIRAFDVIDGSRLKNGRVFCHIDNGIPDGIRTDVNG NLWSSAGDGVHCFDRAGKLIGKIRVPQTVANLTFGGPGRNRLFIAATRSLYSVYVATTGAQRP
Specific function: Hydrolyzes the gluconolactone formed by glucose-fructose oxidoreductase, and that formed in aerobic conditions by the glucose dehydrogenase present [H]
COG id: COG3386
COG function: function code G; Gluconolactonase
Gene ontology:
Cell location: Periplasm (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011042 - InterPro: IPR013658 - InterPro: IPR005511 - InterPro: IPR006311 [H]
Pfam domain/function: PF08450 SGL [H]
EC number: =3.1.1.17 [H]
Molecular weight: Translated: 33618; Mature: 33487
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEASIYEIHDPRFRQLIVTSAGLDELYSGCRWAEGPVWFNDANQLLWSDIPNQRMLRWT CCCCEEEECCCCCCEEEEEECCCHHHHHHCCEECCCCEEECCCCHHHHHCCCCCCEEEEC PEGGVSIYRQPSNFTNGHTRDRQGRLVSCEHGGRRVTRTETDGSITVLADRFEGARLNSP CCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCCC NDVVVKSDGTVWFTDPTYGIMSNYEGYQAEPEQPTRNVYRLDPATGKLAAVVADFIQPNG CEEEEECCCEEEECCCCHHHHCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCC LAFSPDETILYVADSAASHDESLPRHIRAFDVIDGSRLKNGRVFCHIDNGIPDGIRTDVN EEECCCCEEEEEECCCCCCCHHHHHHEEEEEEECCCCCCCCEEEEEECCCCCCCCEECCC GNLWSSAGDGVHCFDRAGKLIGKIRVPQTVANLTFGGPGRNRLFIAATRSLYSVYVATTG CCEECCCCCCCHHHHHHHHHEEEEECCHHHHHEEECCCCCCEEEEEEECCEEEEEEEECC AQRP CCCC >Mature Secondary Structure AEASIYEIHDPRFRQLIVTSAGLDELYSGCRWAEGPVWFNDANQLLWSDIPNQRMLRWT CCCEEEECCCCCCEEEEEECCCHHHHHHCCEECCCCEEECCCCHHHHHCCCCCCEEEEC PEGGVSIYRQPSNFTNGHTRDRQGRLVSCEHGGRRVTRTETDGSITVLADRFEGARLNSP CCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCCC NDVVVKSDGTVWFTDPTYGIMSNYEGYQAEPEQPTRNVYRLDPATGKLAAVVADFIQPNG CEEEEECCCEEEECCCCHHHHCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCC LAFSPDETILYVADSAASHDESLPRHIRAFDVIDGSRLKNGRVFCHIDNGIPDGIRTDVN EEECCCCEEEEEECCCCCCCHHHHHHEEEEEEECCCCCCCCEEEEEECCCCCCCCEECCC GNLWSSAGDGVHCFDRAGKLIGKIRVPQTVANLTFGGPGRNRLFIAATRSLYSVYVATTG CCEECCCCCCCHHHHHHHHHEEEEECCHHHHHEEECCCCCCEEEEEEECCEEEEEEEECC AQRP CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1482681 [H]