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The map label for this gene is rbsC [H]

Identifier: 86361214

GI number: 86361214

Start: 545680

End: 546630

Strand: Direct

Name: rbsC [H]

Synonym: RHE_PF00484

Alternate gene names: 86361214

Gene position: 545680-546630 (Clockwise)

Preceding gene: 86361213

Following gene: 86361215

Centisome position: 84.93

GC content: 62.78

Gene sequence:

>951_bases
ATGACTCCCCTTCTCAGCCTTTTCGGCAAACCCTGGATCTGGTCATGGCTTGCCGCTTTCATCGTCTGGTTCCTGACGAT
CATGGTGACCCTTGGCGCCAGTACGCTCGGCCTGTCGCAGGCGGCACTCACCTTCGCCGCCTTCTCGGTCATCGTCGGCA
TCGGCCAGATGTTCGTCATCACGCTCGGTCCCGGCAATATCGATCTGTCGGTTCCCGCCACCATGACACTTGCCGGCACG
GTCGCGCTGAAGCTGATGAATGTCGAAAACGGCTTGATCCTGCCAGGGCTTCTTGTCGCCATCCTCATCGGCGTCGTCGT
CGGCCTCGGCAACTATGCCCTGATCAAGGCGCTGCGCATTCCGCCGATCATCGCCACGCTTTCCGTCAGCTTCATCGTGC
AGTCCGCGGCGATTTGGACGAACCGCGGCTTGCGCATCAAGCCGCCGAGCATGCTTGCAGAATTCACCACCTCGAACACG
CTCGGCGTGCCGAACGTGGCGATCGTCGCGCTCCTCATCTCGCTTTTCGCCTGGTTCATGCTCCATAAGACGATCTACGG
GCGCTGGATCTCGGCGATCGGCCAGAGCATGCCCGCCTCACGCATGGCCGGCATTCCGGTCGACGGCACGCGCTTCGTCA
CCTACCTCTTCTGCGCCGTGCTTGCATCCGTCGCGGGCTACCTGCTCGCCTGCTTCTCCGGCGGCGCAGCACTCAATATG
GGCTCGGAATATCTGCTGACCTCGATCGCCGTCGTCGTGATCGGCGGCACGGCGGTGGCCGGCGGCGATTCCAACGTGCC
GGGCATCTGGGGCGCGTCGCTCTTCATGTTCCTGGTCGTCTCCATGCTCAACACCTATGGGTTCGGCGCGGGCATCCGCC
TCATCATGACCGGCCTCATCATCATCAGCGTGATCATGCTCGCCGGCGGTCGCCGGACCGGCATGCGATAA

Upstream 100 bases:

>100_bases
CGCCCGACTGGCAGATCGGAGCCCAGGGCGCGATCCTGATCATCGTGCTCGCGCTTCGCCTCATGCTGAACCGCCTGGAG
AAACGGGAGAAACGCCGCCG

Downstream 100 bases:

>100_bases
TCAGGAAGACCATCATGGCCGAGGCCAGCATCTACGAAATCCACGACCCGCGCTTCCGCCAGTTGATCGTCACCAGCGCC
GGTCTCGACGAACTCTATTC

Product: sugar ABC transporter, permease protein

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 315

Protein sequence:

>316_residues
MTPLLSLFGKPWIWSWLAAFIVWFLTIMVTLGASTLGLSQAALTFAAFSVIVGIGQMFVITLGPGNIDLSVPATMTLAGT
VALKLMNVENGLILPGLLVAILIGVVVGLGNYALIKALRIPPIIATLSVSFIVQSAAIWTNRGLRIKPPSMLAEFTTSNT
LGVPNVAIVALLISLFAWFMLHKTIYGRWISAIGQSMPASRMAGIPVDGTRFVTYLFCAVLASVAGYLLACFSGGAALNM
GSEYLLTSIAVVVIGGTAVAGGDSNVPGIWGASLFMFLVVSMLNTYGFGAGIRLIMTGLIIISVIMLAGGRRTGMR

Sequences:

>Translated_316_residues
MTPLLSLFGKPWIWSWLAAFIVWFLTIMVTLGASTLGLSQAALTFAAFSVIVGIGQMFVITLGPGNIDLSVPATMTLAGT
VALKLMNVENGLILPGLLVAILIGVVVGLGNYALIKALRIPPIIATLSVSFIVQSAAIWTNRGLRIKPPSMLAEFTTSNT
LGVPNVAIVALLISLFAWFMLHKTIYGRWISAIGQSMPASRMAGIPVDGTRFVTYLFCAVLASVAGYLLACFSGGAALNM
GSEYLLTSIAVVVIGGTAVAGGDSNVPGIWGASLFMFLVVSMLNTYGFGAGIRLIMTGLIIISVIMLAGGRRTGMR
>Mature_315_residues
TPLLSLFGKPWIWSWLAAFIVWFLTIMVTLGASTLGLSQAALTFAAFSVIVGIGQMFVITLGPGNIDLSVPATMTLAGTV
ALKLMNVENGLILPGLLVAILIGVVVGLGNYALIKALRIPPIIATLSVSFIVQSAAIWTNRGLRIKPPSMLAEFTTSNTL
GVPNVAIVALLISLFAWFMLHKTIYGRWISAIGQSMPASRMAGIPVDGTRFVTYLFCAVLASVAGYLLACFSGGAALNMG
SEYLLTSIAVVVIGGTAVAGGDSNVPGIWGASLFMFLVVSMLNTYGFGAGIRLIMTGLIIISVIMLAGGRRTGMR

Specific function: Part of the binding-protein-dependent transport system for ribose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1172

COG function: function code G; Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790191, Length=258, Percent_Identity=27.5193798449612, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI145693152, Length=317, Percent_Identity=27.1293375394322, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1787794, Length=120, Percent_Identity=33.3333333333333, Blast_Score=66, Evalue=4e-12,
Organism=Escherichia coli, GI87082395, Length=251, Percent_Identity=27.8884462151394, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 33135; Mature: 33004

Theoretical pI: Translated: 10.50; Mature: 10.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPLLSLFGKPWIWSWLAAFIVWFLTIMVTLGASTLGLSQAALTFAAFSVIVGIGQMFVI
CCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEEE
TLGPGNIDLSVPATMTLAGTVALKLMNVENGLILPGLLVAILIGVVVGLGNYALIKALRI
EECCCCEEEECCCHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHC
PPIIATLSVSFIVQSAAIWTNRGLRIKPPSMLAEFTTSNTLGVPNVAIVALLISLFAWFM
CHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
LHKTIYGRWISAIGQSMPASRMAGIPVDGTRFVTYLFCAVLASVAGYLLACFSGGAALNM
HHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECC
GSEYLLTSIAVVVIGGTAVAGGDSNVPGIWGASLFMFLVVSMLNTYGFGAGIRLIMTGLI
CHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
IISVIMLAGGRRTGMR
HHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TPLLSLFGKPWIWSWLAAFIVWFLTIMVTLGASTLGLSQAALTFAAFSVIVGIGQMFVI
CCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEEE
TLGPGNIDLSVPATMTLAGTVALKLMNVENGLILPGLLVAILIGVVVGLGNYALIKALRI
EECCCCEEEECCCHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHC
PPIIATLSVSFIVQSAAIWTNRGLRIKPPSMLAEFTTSNTLGVPNVAIVALLISLFAWFM
CHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
LHKTIYGRWISAIGQSMPASRMAGIPVDGTRFVTYLFCAVLASVAGYLLACFSGGAALNM
HHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECC
GSEYLLTSIAVVVIGGTAVAGGDSNVPGIWGASLFMFLVVSMLNTYGFGAGIRLIMTGLI
CHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
IISVIMLAGGRRTGMR
HHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]