| Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
|---|---|
| Accession | NC_007766 |
| Length | 642,517 |
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The map label for this gene is bglSf
Identifier: 86361203
GI number: 86361203
Start: 533281
End: 535746
Strand: Reverse
Name: bglSf
Synonym: RHE_PF00473
Alternate gene names: 86361203
Gene position: 535746-533281 (Counterclockwise)
Preceding gene: 86361205
Following gene: 86361202
Centisome position: 83.38
GC content: 63.58
Gene sequence:
>2466_bases ATGATCGATTCCATTCTCGACAGGATGACGCTCGAAGAACAGGTCTCCTTGCTGTCAGGTGCCGATTTCTGGACGACTGT CCCGGTCGAGCGTCTCGGCGTGCCGAAGATCAAGGTGACGGACGGTCCGAACGGCGCCCGCGGCGCGGGCTCGCTTGTCG CCGGCGTCAAGGCGACCTGCTTTCCCGTCGCCATCGCGCTCGGTGCCAGCTGGAATCCCGATCTCGTCAAGCAGATGGGG GTTGCCCTTGCGCGCCAGGCAAAGAGCAAGGGAGCGGCCGTGCTGCTCGCGCCAACAGTCAATATCCATCGATCAGGCCT CAACGGCCGCAATTTCGAATGCTATTCCGAAGATCCGATGCTGACGTCAGGACTCGCCGTCGCCTATATCGAAGGCGTGC AGGGTGAGGGGATCGCGGCGACCATAAAACACTTCGCCGGCAATGAATCCGAGATCGAGCGGCAGACCATGTCGTCCGAT ATCGACGAGCGGACGTTGCGCGAAATCTATCTGCCGCCCTTCGAGCAGGCGGTGCGCCGCGCCGGCGTCATGGCGGTCAT GTCATCCTATAATCGCCTCAACGGCACCTATACGAGTGAGCATCACTGGCTGCTGACCAAGGTGCTGCGCGAGGAATGGG GCTTCGACGGCATCGTCATGTCCGACTGGTTCGGCTCGCATTCGACAGCAGAGACGATCAATGCCGGCCTCGATCTCGAA ATGCCCGGCCCGGCGCGCGACCGCGGCGACAAGCTGGTTGCGGCAGTGCGCGAGGGCAAGGTGGACGCGGCAACGGTGCG CGCTTCGGCCCGGCGCATGCTCTTGCTGCTCGAACGCGTCGGCGCATTCAAGAGCAAGCCCGATCTCACCGAACGGGCGA TCGACCTGCCAGAGGATCGAGCGCTGATCCGGCGGCTTGGCGCCGAAGGCGCGGTGCTTCTCAAGAATGATGGCATCCTG CCGCTTGCCAAGACCTCACTCGACCGGATTGCCGTCATCGGACCGAATGCTGCCACCGCCCGCGTCATGGGCGGCGGCAG CGCGCAGATCGCGGCGCATTATACGGTGAGCCCTCTCGAAGGCATTCGCGCCGCCCTTTCCAATGCCAACAGCATCAGTC ACGCGGTCGGCTGCCGCCATAACCGGCTGATCGACGTGTTCAAGGGAAAGATCACCGTCGAATATTTCAAGGGGCGCGGC TGCAACGGCGATCCGCTTCATGTCGATACCGTCGACAAGGGCGAATTCTTCTGGTTCGAGCTGCCGTCGGACGAACTCGA CCCCGCCGATTTCTCAGCTCGAATGGTGATGCAGTATGCACCGGAGGAGAGCGGCGAACATGTCTTCGGCATGACCAATG CCGGGCTGGCGCGGCTCTTTGTCGATGGCAGGCTCATGGTCGACGGCCATGAGGGCTGGACGCGCGGCGCGAATTATTTC GGCACCGCCAATGACGAACAGCGCGGCGCGGCGACGCTCGACGCGGGCCGTTCCTACGAGCTCACCGTCGAATATGAACC GTCCATGGCGAGCGAAGAGGGGATCAACCTCATCGCCGTCCGTTTCGGCGTCGAAAAGCCGCTCGGCGAGGCCGATATCG CGGCCGCCGTCGAAACGGCCCGCAATGCCGATGTGGCACTGCTCTTCGTCGGCCGCGATGGCGAGTGGGACACGGAAGGG CTTGATCTGCCCGATATGCGGCTGCCGGGCCTGCAGGAAGAACTGATCGAGAAGGTCGCCGCCGCCAACGCCAACACCGT GATCGTTCTGCAGACCGGCGGCCCCATTGAGATGCCTTGGCTCGGCAATGTCCGCGCCGTGCTGCAAATGTGGTATCCCG GTCAGGAACTCGGCAATGCGGTCGCCGACGTGTTGTTCGGCGATGCCGGGCCCGGCGGGCGCCTGCCGCAGACCTTTCCA AAGGCTCTGACCGACAATTCCGCCATCACGGGCGATCCTGCCGTCTATCCCGGCAAGGACGGGCATGTGCACTATGCCGA GGGGGTCTTCGTCGGCTACCGCCATCACGACATCAGCGCCGTCGAGCCGCTTTTCCCCTTCGGCTTCGGCCTCGGCTATA CGAGTTTCCGCTGGGGCGAGCCGCGGCTTTCGGTGCGTGAAATGGGACCGGACGGCATAAGCGTCAGCCTCGAGGTGACC AATACAGGCGACCGCCCCGGCTCGGAACTGGTTCAGCTCTATGTGCGCTCGCCGAAGGCGAAAGTGGCACGGCCGGACAA GGAACTGCGCGCCTTTGCAAAGCTCTTGCTGCAACCCGGCGAAACCGGCACGGCCGTCATGAAGATCCTGCCGCGCGATC TGGCCTATTTTGATATCGAAGCCGGGTCCTTCCGGGCCGAGCCGGGCGGTTATCAGTTGCTTCTGGCGGCCAACGCCGCG GACATAAGATCCGTGATCGACCTGCCGTTGCCAGCCGGCTACATGCAGCCGCCGTCGACTGCATGA
Upstream 100 bases:
>100_bases CTTTCTTACATCAGGTCCGTCAGCTTGACATCTTAAAAATACCGAGTAATCGGTAGGTTTAACAGGCGCGATGCTGGCAG TCTTTGAACGGGAGGTTTGC
Downstream 100 bases:
>100_bases CTCATATCGAAACGGTCACGCGCCATCGATTTAGGTGAATGAAAACAGTGATCAAGAGGCTTTTCCAGCCTGTCGGATAA AGCAGGCTGAATATTTTAAG
Product: beta-glucosidase protein
Products: NA
Alternate protein names: Beta-D-glucoside glucohydrolase; Cellobiase; Gentiobiase [H]
Number of amino acids: Translated: 821; Mature: 821
Protein sequence:
>821_residues MIDSILDRMTLEEQVSLLSGADFWTTVPVERLGVPKIKVTDGPNGARGAGSLVAGVKATCFPVAIALGASWNPDLVKQMG VALARQAKSKGAAVLLAPTVNIHRSGLNGRNFECYSEDPMLTSGLAVAYIEGVQGEGIAATIKHFAGNESEIERQTMSSD IDERTLREIYLPPFEQAVRRAGVMAVMSSYNRLNGTYTSEHHWLLTKVLREEWGFDGIVMSDWFGSHSTAETINAGLDLE MPGPARDRGDKLVAAVREGKVDAATVRASARRMLLLLERVGAFKSKPDLTERAIDLPEDRALIRRLGAEGAVLLKNDGIL PLAKTSLDRIAVIGPNAATARVMGGGSAQIAAHYTVSPLEGIRAALSNANSISHAVGCRHNRLIDVFKGKITVEYFKGRG CNGDPLHVDTVDKGEFFWFELPSDELDPADFSARMVMQYAPEESGEHVFGMTNAGLARLFVDGRLMVDGHEGWTRGANYF GTANDEQRGAATLDAGRSYELTVEYEPSMASEEGINLIAVRFGVEKPLGEADIAAAVETARNADVALLFVGRDGEWDTEG LDLPDMRLPGLQEELIEKVAAANANTVIVLQTGGPIEMPWLGNVRAVLQMWYPGQELGNAVADVLFGDAGPGGRLPQTFP KALTDNSAITGDPAVYPGKDGHVHYAEGVFVGYRHHDISAVEPLFPFGFGLGYTSFRWGEPRLSVREMGPDGISVSLEVT NTGDRPGSELVQLYVRSPKAKVARPDKELRAFAKLLLQPGETGTAVMKILPRDLAYFDIEAGSFRAEPGGYQLLLAANAA DIRSVIDLPLPAGYMQPPSTA
Sequences:
>Translated_821_residues MIDSILDRMTLEEQVSLLSGADFWTTVPVERLGVPKIKVTDGPNGARGAGSLVAGVKATCFPVAIALGASWNPDLVKQMG VALARQAKSKGAAVLLAPTVNIHRSGLNGRNFECYSEDPMLTSGLAVAYIEGVQGEGIAATIKHFAGNESEIERQTMSSD IDERTLREIYLPPFEQAVRRAGVMAVMSSYNRLNGTYTSEHHWLLTKVLREEWGFDGIVMSDWFGSHSTAETINAGLDLE MPGPARDRGDKLVAAVREGKVDAATVRASARRMLLLLERVGAFKSKPDLTERAIDLPEDRALIRRLGAEGAVLLKNDGIL PLAKTSLDRIAVIGPNAATARVMGGGSAQIAAHYTVSPLEGIRAALSNANSISHAVGCRHNRLIDVFKGKITVEYFKGRG CNGDPLHVDTVDKGEFFWFELPSDELDPADFSARMVMQYAPEESGEHVFGMTNAGLARLFVDGRLMVDGHEGWTRGANYF GTANDEQRGAATLDAGRSYELTVEYEPSMASEEGINLIAVRFGVEKPLGEADIAAAVETARNADVALLFVGRDGEWDTEG LDLPDMRLPGLQEELIEKVAAANANTVIVLQTGGPIEMPWLGNVRAVLQMWYPGQELGNAVADVLFGDAGPGGRLPQTFP KALTDNSAITGDPAVYPGKDGHVHYAEGVFVGYRHHDISAVEPLFPFGFGLGYTSFRWGEPRLSVREMGPDGISVSLEVT NTGDRPGSELVQLYVRSPKAKVARPDKELRAFAKLLLQPGETGTAVMKILPRDLAYFDIEAGSFRAEPGGYQLLLAANAA DIRSVIDLPLPAGYMQPPSTA >Mature_821_residues MIDSILDRMTLEEQVSLLSGADFWTTVPVERLGVPKIKVTDGPNGARGAGSLVAGVKATCFPVAIALGASWNPDLVKQMG VALARQAKSKGAAVLLAPTVNIHRSGLNGRNFECYSEDPMLTSGLAVAYIEGVQGEGIAATIKHFAGNESEIERQTMSSD IDERTLREIYLPPFEQAVRRAGVMAVMSSYNRLNGTYTSEHHWLLTKVLREEWGFDGIVMSDWFGSHSTAETINAGLDLE MPGPARDRGDKLVAAVREGKVDAATVRASARRMLLLLERVGAFKSKPDLTERAIDLPEDRALIRRLGAEGAVLLKNDGIL PLAKTSLDRIAVIGPNAATARVMGGGSAQIAAHYTVSPLEGIRAALSNANSISHAVGCRHNRLIDVFKGKITVEYFKGRG CNGDPLHVDTVDKGEFFWFELPSDELDPADFSARMVMQYAPEESGEHVFGMTNAGLARLFVDGRLMVDGHEGWTRGANYF GTANDEQRGAATLDAGRSYELTVEYEPSMASEEGINLIAVRFGVEKPLGEADIAAAVETARNADVALLFVGRDGEWDTEG LDLPDMRLPGLQEELIEKVAAANANTVIVLQTGGPIEMPWLGNVRAVLQMWYPGQELGNAVADVLFGDAGPGGRLPQTFP KALTDNSAITGDPAVYPGKDGHVHYAEGVFVGYRHHDISAVEPLFPFGFGLGYTSFRWGEPRLSVREMGPDGISVSLEVT NTGDRPGSELVQLYVRSPKAKVARPDKELRAFAKLLLQPGETGTAVMKILPRDLAYFDIEAGSFRAEPGGYQLLLAANAA DIRSVIDLPLPAGYMQPPSTA
Specific function: Involved in modifying a vir-inducing plant signal molecule. Hydrolyzes coniferin but not cellobiose [H]
COG id: COG1472
COG function: function code G; Beta-glucosidase-related glycosidases
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788453, Length=280, Percent_Identity=33.9285714285714, Blast_Score=151, Evalue=2e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019800 - InterPro: IPR002772 - InterPro: IPR001764 - InterPro: IPR017853 - InterPro: IPR011658 [H]
Pfam domain/function: PF00933 Glyco_hydro_3; PF01915 Glyco_hydro_3_C [H]
EC number: =3.2.1.21 [H]
Molecular weight: Translated: 88424; Mature: 88424
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: PS00775 GLYCOSYL_HYDROL_F3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDSILDRMTLEEQVSLLSGADFWTTVPVERLGVPKIKVTDGPNGARGAGSLVAGVKATC CHHHHHHHHHHHHHHHHHCCCCCEEECCHHHCCCCEEEEECCCCCCCCCCHHHHCCHHHH FPVAIALGASWNPDLVKQMGVALARQAKSKGAAVLLAPTVNIHRSGLNGRNFECYSEDPM HHHHHEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEECCCCCCCEEEECCCCC LTSGLAVAYIEGVQGEGIAATIKHFAGNESEIERQTMSSDIDERTLREIYLPPFEQAVRR CCCCEEEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHH AGVMAVMSSYNRLNGTYTSEHHWLLTKVLREEWGFDGIVMSDWFGSHSTAETINAGLDLE HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHCCCEEE MPGPARDRGDKLVAAVREGKVDAATVRASARRMLLLLERVGAFKSKPDLTERAIDLPEDR CCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCHHH ALIRRLGAEGAVLLKNDGILPLAKTSLDRIAVIGPNAATARVMGGGSAQIAAHYTVSPLE HHHHHHCCCCEEEEECCCCCEEECCCCCEEEEECCCCCEEEEECCCCCEEEEEEECCHHH GIRAALSNANSISHAVGCRHNRLIDVFKGKITVEYFKGRGCNGDPLHVDTVDKGEFFWFE HHHHHHHCCCHHHHHHCCCCCCEEEEECCEEEEEEEECCCCCCCCEEEEECCCCCEEEEE LPSDELDPADFSARMVMQYAPEESGEHVFGMTNAGLARLFVDGRLMVDGHEGWTRGANYF CCCCCCCCCCHHHHHHEEECCCCCCCEEEEECCCCEEEEEECCEEEEECCCCCCCCCCCC GTANDEQRGAATLDAGRSYELTVEYEPSMASEEGINLIAVRFGVEKPLGEADIAAAVETA CCCCCCCCCCEEECCCCCEEEEEEECCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHC RNADVALLFVGRDGEWDTEGLDLPDMRLPGLQEELIEKVAAANANTVIVLQTGGPIEMPW CCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCC LGNVRAVLQMWYPGQELGNAVADVLFGDAGPGGRLPQTFPKALTDNSAITGDPAVYPGKD CCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCC GHVHYAEGVFVGYRHHDISAVEPLFPFGFGLGYTSFRWGEPRLSVREMGPDGISVSLEVT CCEEEECCEEEEEEECCCCCCCCHHHHHHCCCCCCEECCCCCCCHHHCCCCCEEEEEEEE NTGDRPGSELVQLYVRSPKAKVARPDKELRAFAKLLLQPGETGTAVMKILPRDLAYFDIE CCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEEE AGSFRAEPGGYQLLLAANAADIRSVIDLPLPAGYMQPPSTA CCCEECCCCCEEEEEECCHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MIDSILDRMTLEEQVSLLSGADFWTTVPVERLGVPKIKVTDGPNGARGAGSLVAGVKATC CHHHHHHHHHHHHHHHHHCCCCCEEECCHHHCCCCEEEEECCCCCCCCCCHHHHCCHHHH FPVAIALGASWNPDLVKQMGVALARQAKSKGAAVLLAPTVNIHRSGLNGRNFECYSEDPM HHHHHEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEECCCCCCCEEEECCCCC LTSGLAVAYIEGVQGEGIAATIKHFAGNESEIERQTMSSDIDERTLREIYLPPFEQAVRR CCCCEEEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHH AGVMAVMSSYNRLNGTYTSEHHWLLTKVLREEWGFDGIVMSDWFGSHSTAETINAGLDLE HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHCCCEEE MPGPARDRGDKLVAAVREGKVDAATVRASARRMLLLLERVGAFKSKPDLTERAIDLPEDR CCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCHHH ALIRRLGAEGAVLLKNDGILPLAKTSLDRIAVIGPNAATARVMGGGSAQIAAHYTVSPLE HHHHHHCCCCEEEEECCCCCEEECCCCCEEEEECCCCCEEEEECCCCCEEEEEEECCHHH GIRAALSNANSISHAVGCRHNRLIDVFKGKITVEYFKGRGCNGDPLHVDTVDKGEFFWFE HHHHHHHCCCHHHHHHCCCCCCEEEEECCEEEEEEEECCCCCCCCEEEEECCCCCEEEEE LPSDELDPADFSARMVMQYAPEESGEHVFGMTNAGLARLFVDGRLMVDGHEGWTRGANYF CCCCCCCCCCHHHHHHEEECCCCCCCEEEEECCCCEEEEEECCEEEEECCCCCCCCCCCC GTANDEQRGAATLDAGRSYELTVEYEPSMASEEGINLIAVRFGVEKPLGEADIAAAVETA CCCCCCCCCCEEECCCCCEEEEEEECCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHC RNADVALLFVGRDGEWDTEGLDLPDMRLPGLQEELIEKVAAANANTVIVLQTGGPIEMPW CCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCC LGNVRAVLQMWYPGQELGNAVADVLFGDAGPGGRLPQTFPKALTDNSAITGDPAVYPGKD CCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCC GHVHYAEGVFVGYRHHDISAVEPLFPFGFGLGYTSFRWGEPRLSVREMGPDGISVSLEVT CCEEEECCEEEEEEECCCCCCCCHHHHHHCCCCCCEECCCCCCCHHHCCCCCEEEEEEEE NTGDRPGSELVQLYVRSPKAKVARPDKELRAFAKLLLQPGETGTAVMKILPRDLAYFDIE CCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEEE AGSFRAEPGGYQLLLAANAADIRSVIDLPLPAGYMQPPSTA CCCEECCCCCEEEEEECCHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1537792 [H]