| Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
|---|---|
| Accession | NC_007766 |
| Length | 642,517 |
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The map label for this gene is 86361174
Identifier: 86361174
GI number: 86361174
Start: 497668
End: 498786
Strand: Direct
Name: 86361174
Synonym: RHE_PF00444
Alternate gene names: NA
Gene position: 497668-498786 (Clockwise)
Preceding gene: 86361173
Following gene: 86361175
Centisome position: 77.46
GC content: 58.8
Gene sequence:
>1119_bases ATGGATTCCTATAGTATCAAGACGCTCGATGAGCTGAAAGAGTTTCTCTACCGGGCGATGCAGCTCGAGCATGCGACGAT TCCGCCGTATCTGACGGCGCTCTACTCGATCAAGCCCGGCGTCAATCAGGACGCAACCCAGGTTCTGCGCGTAATCGTCG TGGAAGAAATGCTGCATCTGACGATCGCGGCCAATATTCTCAATGCCATCGGCGGCAAGCCGGATCTTGTCAGGCCGGAC TTCGTAGCCAGCTATCCCGCCGCCCTGCCGGACGGCGAGACCGATTTCAAGGTCGGCATCCAGGCATTCGGCCGTGAGGC GCTGGCGACTTTCCTGAAAATCGAGCGGCCGGCCCAGCGTCCTGAACATCTCGTCGGCAAGGGCCTGATACACCGCAAAA CTCCCGCTGGTATCACCGCGCTCGCCAGCCATCCGAGACATGAGGACCTCCATTTCTACAGTATCGGCGAGTTCTACTCG GCCATCGCGGAAGGCATCAAATACCTGGAAGCCGAAGCGCATGAGGCGGGCACAACCATCTTTACCGGCGACAGGTCGCG CCAGATCACCTCGGAATACTATTACTCCGGCGGCGGCGAGCTGTTTGCGGTGACCGATCTGAAAAGTGCCCAGGAAGCGC TCGAACTCATCATCGAACAGGGCGAAGGCGACGGCGGCGGTATCTACGACGATGACGACCACGAACTGGCCCATTACTAT CGTTTCGAGGAACTGGTCAAAGGCCGCTACTACCAGAAGGGCGACCAGCCCGGCCACCCCACGGGTCCGCACCTGCAGGT CGATTGGGAGGGCGCCTATCCCATAAAAGAGAACCTGAAAGTGGGGGACATACTCGAAGGTTCGGAACTGCGTGAGGCGG CGATCGCCTTCAACACGCGCTATGGCGAATTTCTCCAGCTTGTGACGCGTGCCTATAACGGCCAGCCAAACCTGCTGCTG GAAGCCGTTCCGATGATGTTCGAATTCCGAAACATGATCCTCGAACTCATCCGCAATCCGCTGCCAAAGCATCCCGGTAA GAACGGCAGCCCCACCTATGAGATCCCCGGCGGTATCAAACAGCCAGTCGTCACCCGGCAGGCGGAGGTGAACGCATGA
Upstream 100 bases:
>100_bases GAACGAAGACCGGTATCCAGCGCGGAACGAACCTATGGGTTCGATGCAAGTGACACGAAGCCGGCCGGTGCACCCAACTT ATCTTTCACGGAGCATGAGC
Downstream 100 bases:
>100_bases GCAGCCGTTTCGAGCCATTTCTGGGTCTTTCCGTCGAATTGACGGCCTTCTCCTACTTCGATCTTCTGGGAACCGGCTTG GCAGAACGCTATCTCGCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 372; Mature: 372
Protein sequence:
>372_residues MDSYSIKTLDELKEFLYRAMQLEHATIPPYLTALYSIKPGVNQDATQVLRVIVVEEMLHLTIAANILNAIGGKPDLVRPD FVASYPAALPDGETDFKVGIQAFGREALATFLKIERPAQRPEHLVGKGLIHRKTPAGITALASHPRHEDLHFYSIGEFYS AIAEGIKYLEAEAHEAGTTIFTGDRSRQITSEYYYSGGGELFAVTDLKSAQEALELIIEQGEGDGGGIYDDDDHELAHYY RFEELVKGRYYQKGDQPGHPTGPHLQVDWEGAYPIKENLKVGDILEGSELREAAIAFNTRYGEFLQLVTRAYNGQPNLLL EAVPMMFEFRNMILELIRNPLPKHPGKNGSPTYEIPGGIKQPVVTRQAEVNA
Sequences:
>Translated_372_residues MDSYSIKTLDELKEFLYRAMQLEHATIPPYLTALYSIKPGVNQDATQVLRVIVVEEMLHLTIAANILNAIGGKPDLVRPD FVASYPAALPDGETDFKVGIQAFGREALATFLKIERPAQRPEHLVGKGLIHRKTPAGITALASHPRHEDLHFYSIGEFYS AIAEGIKYLEAEAHEAGTTIFTGDRSRQITSEYYYSGGGELFAVTDLKSAQEALELIIEQGEGDGGGIYDDDDHELAHYY RFEELVKGRYYQKGDQPGHPTGPHLQVDWEGAYPIKENLKVGDILEGSELREAAIAFNTRYGEFLQLVTRAYNGQPNLLL EAVPMMFEFRNMILELIRNPLPKHPGKNGSPTYEIPGGIKQPVVTRQAEVNA >Mature_372_residues MDSYSIKTLDELKEFLYRAMQLEHATIPPYLTALYSIKPGVNQDATQVLRVIVVEEMLHLTIAANILNAIGGKPDLVRPD FVASYPAALPDGETDFKVGIQAFGREALATFLKIERPAQRPEHLVGKGLIHRKTPAGITALASHPRHEDLHFYSIGEFYS AIAEGIKYLEAEAHEAGTTIFTGDRSRQITSEYYYSGGGELFAVTDLKSAQEALELIIEQGEGDGGGIYDDDDHELAHYY RFEELVKGRYYQKGDQPGHPTGPHLQVDWEGAYPIKENLKVGDILEGSELREAAIAFNTRYGEFLQLVTRAYNGQPNLLL EAVPMMFEFRNMILELIRNPLPKHPGKNGSPTYEIPGGIKQPVVTRQAEVNA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41413; Mature: 41413
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSYSIKTLDELKEFLYRAMQLEHATIPPYLTALYSIKPGVNQDATQVLRVIVVEEMLHL CCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH TIAANILNAIGGKPDLVRPDFVASYPAALPDGETDFKVGIQAFGREALATFLKIERPAQR HHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHCC PEHLVGKGLIHRKTPAGITALASHPRHEDLHFYSIGEFYSAIAEGIKYLEAEAHEAGTTI HHHHHHCCCCCCCCCCCHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCEE FTGDRSRQITSEYYYSGGGELFAVTDLKSAQEALELIIEQGEGDGGGIYDDDDHELAHYY EECCCCHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH RFEELVKGRYYQKGDQPGHPTGPHLQVDWEGAYPIKENLKVGDILEGSELREAAIAFNTR HHHHHHCCHHHCCCCCCCCCCCCEEEEECCCCCCHHHCCCCCCCCCCHHHHHHHHHHCCC YGEFLQLVTRAYNGQPNLLLEAVPMMFEFRNMILELIRNPLPKHPGKNGSPTYEIPGGIK HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCC QPVVTRQAEVNA CCCHHCHHCCCC >Mature Secondary Structure MDSYSIKTLDELKEFLYRAMQLEHATIPPYLTALYSIKPGVNQDATQVLRVIVVEEMLHL CCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH TIAANILNAIGGKPDLVRPDFVASYPAALPDGETDFKVGIQAFGREALATFLKIERPAQR HHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHCC PEHLVGKGLIHRKTPAGITALASHPRHEDLHFYSIGEFYSAIAEGIKYLEAEAHEAGTTI HHHHHHCCCCCCCCCCCHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCEE FTGDRSRQITSEYYYSGGGELFAVTDLKSAQEALELIIEQGEGDGGGIYDDDDHELAHYY EECCCCHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH RFEELVKGRYYQKGDQPGHPTGPHLQVDWEGAYPIKENLKVGDILEGSELREAAIAFNTR HHHHHHCCHHHCCCCCCCCCCCCEEEEECCCCCCHHHCCCCCCCCCCHHHHHHHHHHCCC YGEFLQLVTRAYNGQPNLLLEAVPMMFEFRNMILELIRNPLPKHPGKNGSPTYEIPGGIK HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCC QPVVTRQAEVNA CCCHHCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA