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The map label for this gene is 86361102

Identifier: 86361102

GI number: 86361102

Start: 419487

End: 420683

Strand: Reverse

Name: 86361102

Synonym: RHE_PF00372

Alternate gene names: NA

Gene position: 420683-419487 (Counterclockwise)

Preceding gene: 86361109

Following gene: 86361101

Centisome position: 65.47

GC content: 63.99

Gene sequence:

>1197_bases
ATGAAGCGGATCTACGCAGTCGGCACGGCCGACACGAAGGGCGAGGAGCTTGCCTATCTTGCCGCTTGCATCGAAGCTGC
GGGCGGGTCTGTTGTACGCGTCGACGTCGGCATCCGTGAGCCCCGGACCGTCGTCGATGTGAACGCCAATGCGGTTGCCG
CATGCCACCCCGACGGTGCTGTAGCCGTCCTTGCCTGTGAGGACCGCGGCCGGGCGGTCGAAGCGATGGGCATTGCCTTC
GCGCGCTTCCTCGTGGAGCGCCGGGACATCGCCGGCATCATCGGTATCGGCGGAGGTGGGGGCACTTCGATCATTACTGC
GGGCATGCGCCAATTGCGGCTCGGTCTGCCAAAGATCATGGTCTCGACACTCGCCTCCGGCGATGTTGCTCCCTATGTCG
ATGTTTCCGACATCGTGATGATGCCTTCAGTCACGGACATGGCGGGTCTGAACCGGCTCAGCCGCGTCATTCTTCACAAC
GCCGCCCAGGCGATCACCGCCATGTCCCGCCGGCCGGCTGAGGTGACTGCATCGAAACCGGCGCTCGGGCTTACCATGTT
CGGCGTGACCACACCCGCCGTATCCGCCATGGTCGAGCGCCTGCGTGCGGACTATGATTGCCTGGTCTTCCACGCTACCG
GCACGGGCGGGCGGGCAATGGAGAAGCTTGCCGACAGTGGTGTGATCTCAGGCGTACTCGATATCACGACGACCGAGGTC
TGCGACCTGCTTTTCGGAGGCGTCCTGCCTGCCACCGCGGACCGTTTCGATGCGATTGCCCGCACCGGCCTGCCCTATGT
CGGCTCGGCCGGCGCGCTCGATATGGTGAACTTCTGGGCGCCGGAGACTGTCCCTCAACGCTATGCTGGCCGGCTGTTTT
ACCGCCACAACCCGAACGTCACCTTGATGCGCACGACCTCGGCCGAATGCGCTGAGGTCGGCCGCTGGATCGGCGAAAAG
CTCAATCTCTGCCACGGCCCCGTACGCTTCCTTGTTCCTGAAAAGGGCATCTCGGCCCTCGATATTGAAGGCGGTGCGTT
CTTCGATCCGCAAGCCGACGCCGCGCTCTTTGCCGCCCTTGAGGCGACGGTGAAGCCAACGGTGTCGCGACGCATTGTTC
GCTTGCCGCTCCATATCAACGACCCGCACTTCGCAGAAGCCGCCGTCGCGGCCTATCGTGACATCGCCAACCCCTGA

Upstream 100 bases:

>100_bases
CATATCTTTATGATACGCGAGTCTCAAAAATTTGCAAGAGTCCATCGCTTGCCCCGTGGTGGATGTGCTGGGGAGGAACC
CAACCGGTCTGGGAGGGGAA

Downstream 100 bases:

>100_bases
GAGACAGAATTGATGCCAGCCATACCGCGCAAGACCATTCTCGAAAAATTCCACGGCATGATCGCAGCCGGCGTGCCGAT
CGTCGGCGCCGGCGCCGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 398; Mature: 398

Protein sequence:

>398_residues
MKRIYAVGTADTKGEELAYLAACIEAAGGSVVRVDVGIREPRTVVDVNANAVAACHPDGAVAVLACEDRGRAVEAMGIAF
ARFLVERRDIAGIIGIGGGGGTSIITAGMRQLRLGLPKIMVSTLASGDVAPYVDVSDIVMMPSVTDMAGLNRLSRVILHN
AAQAITAMSRRPAEVTASKPALGLTMFGVTTPAVSAMVERLRADYDCLVFHATGTGGRAMEKLADSGVISGVLDITTTEV
CDLLFGGVLPATADRFDAIARTGLPYVGSAGALDMVNFWAPETVPQRYAGRLFYRHNPNVTLMRTTSAECAEVGRWIGEK
LNLCHGPVRFLVPEKGISALDIEGGAFFDPQADAALFAALEATVKPTVSRRIVRLPLHINDPHFAEAAVAAYRDIANP

Sequences:

>Translated_398_residues
MKRIYAVGTADTKGEELAYLAACIEAAGGSVVRVDVGIREPRTVVDVNANAVAACHPDGAVAVLACEDRGRAVEAMGIAF
ARFLVERRDIAGIIGIGGGGGTSIITAGMRQLRLGLPKIMVSTLASGDVAPYVDVSDIVMMPSVTDMAGLNRLSRVILHN
AAQAITAMSRRPAEVTASKPALGLTMFGVTTPAVSAMVERLRADYDCLVFHATGTGGRAMEKLADSGVISGVLDITTTEV
CDLLFGGVLPATADRFDAIARTGLPYVGSAGALDMVNFWAPETVPQRYAGRLFYRHNPNVTLMRTTSAECAEVGRWIGEK
LNLCHGPVRFLVPEKGISALDIEGGAFFDPQADAALFAALEATVKPTVSRRIVRLPLHINDPHFAEAAVAAYRDIANP
>Mature_398_residues
MKRIYAVGTADTKGEELAYLAACIEAAGGSVVRVDVGIREPRTVVDVNANAVAACHPDGAVAVLACEDRGRAVEAMGIAF
ARFLVERRDIAGIIGIGGGGGTSIITAGMRQLRLGLPKIMVSTLASGDVAPYVDVSDIVMMPSVTDMAGLNRLSRVILHN
AAQAITAMSRRPAEVTASKPALGLTMFGVTTPAVSAMVERLRADYDCLVFHATGTGGRAMEKLADSGVISGVLDITTTEV
CDLLFGGVLPATADRFDAIARTGLPYVGSAGALDMVNFWAPETVPQRYAGRLFYRHNPNVTLMRTTSAECAEVGRWIGEK
LNLCHGPVRFLVPEKGISALDIEGGAFFDPQADAALFAALEATVKPTVSRRIVRLPLHINDPHFAEAAVAAYRDIANP

Specific function: Unknown

COG id: COG5441

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0261 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008322 [H]

Pfam domain/function: PF06792 UPF0261 [H]

EC number: NA

Molecular weight: Translated: 41947; Mature: 41947

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: PS00290 IG_MHC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRIYAVGTADTKGEELAYLAACIEAAGGSVVRVDVGIREPRTVVDVNANAVAACHPDGA
CCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEECCCEEEEECCCCC
VAVLACEDRGRAVEAMGIAFARFLVERRDIAGIIGIGGGGGTSIITAGMRQLRLGLPKIM
EEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCHHHH
VSTLASGDVAPYVDVSDIVMMPSVTDMAGLNRLSRVILHNAAQAITAMSRRPAEVTASKP
HHHHCCCCCCCCCCHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
ALGLTMFGVTTPAVSAMVERLRADYDCLVFHATGTGGRAMEKLADSGVISGVLDITTTEV
CCEEEEECCCHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHH
CDLLFGGVLPATADRFDAIARTGLPYVGSAGALDMVNFWAPETVPQRYAGRLFYRHNPNV
HHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCHHHHHHCEEEEEECCCE
TLMRTTSAECAEVGRWIGEKLNLCHGPVRFLVPEKGISALDIEGGAFFDPQADAALFAAL
EEEEECCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEECCCCEECCCCCHHHHHHH
EATVKPTVSRRIVRLPLHINDPHFAEAAVAAYRDIANP
HHHHCCCCCCEEEEEEEEECCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKRIYAVGTADTKGEELAYLAACIEAAGGSVVRVDVGIREPRTVVDVNANAVAACHPDGA
CCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEECCCEEEEECCCCC
VAVLACEDRGRAVEAMGIAFARFLVERRDIAGIIGIGGGGGTSIITAGMRQLRLGLPKIM
EEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCHHHH
VSTLASGDVAPYVDVSDIVMMPSVTDMAGLNRLSRVILHNAAQAITAMSRRPAEVTASKP
HHHHCCCCCCCCCCHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
ALGLTMFGVTTPAVSAMVERLRADYDCLVFHATGTGGRAMEKLADSGVISGVLDITTTEV
CCEEEEECCCHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHH
CDLLFGGVLPATADRFDAIARTGLPYVGSAGALDMVNFWAPETVPQRYAGRLFYRHNPNV
HHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCHHHHHHCEEEEEECCCE
TLMRTTSAECAEVGRWIGEKLNLCHGPVRFLVPEKGISALDIEGGAFFDPQADAALFAAL
EEEEECCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEECCCCEECCCCCHHHHHHH
EATVKPTVSRRIVRLPLHINDPHFAEAAVAAYRDIANP
HHHHCCCCCCEEEEEEEEECCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11481432 [H]