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The map label for this gene is uxuR [H]

Identifier: 86361036

GI number: 86361036

Start: 344621

End: 345355

Strand: Direct

Name: uxuR [H]

Synonym: RHE_PF00306

Alternate gene names: 86361036

Gene position: 344621-345355 (Clockwise)

Preceding gene: 86361035

Following gene: 86361037

Centisome position: 53.64

GC content: 63.81

Gene sequence:

>735_bases
ATGGCTATGCAGGGGAAGGATCGCGGCAGGGGCTCGGGGTCACTGGTCTCACGGGTCGGCGAAAGCCTTCGGCAAGCCAT
TTTGAGCGGCCAGTATGCCGCCGGCGACAAGCTTCCGAGCGAGCATGAACTGACCGAAACGCACAGCGTCAGCCGAACCG
TGGTGCGCGAGGCGGTCGCCGCGCTGCGGTCCGACGGGTTGGTCGAGGTGCGCCAGGGTGCCGGAATTTTCGTGATCAGC
CCCGACCCGGCGCTGTCGGGCCGGAAGGTCGACAAGGCCCGCGTCGCTTCCGATCTCGAAGTGCTCGAAATCCGCACCCC
CGTCGAAATCGAGGCAGCGGGACTTGCCGCGCTCCGCCGTTCACCGGCGCAGGAAGAGGCGATCTTCGAATGCCATCGGA
AAATCCTCCATTGCATCGAGACGGACCAATCCATCCGCGAGGCGGATCTGGAACTCCATGTCGCCATCGCCGAGGCGACG
AACAATCCGCTGTTCAAGCACTTCCTGGAATCCCAGGGCTCGGCGATCATCCCGCAGTCGCGGCTCGTCCCGGAAACCCG
AACCGTCGAGCAGACCGCCTACCGCAAGCTGATCCATCGCGAACATGAAACGATCATCGTCGCGATCTCTGACAGGGACG
ATCAGGCCGCGCGCAACGCCATGCGCGAGCATCTGGTCGGCAGCCAGGCGCGATATCGCAACCTGCTGAAGGATCTGCGC
AGCTTTACAAGCTGA

Upstream 100 bases:

>100_bases
TGAAATGAAGACAGATTTGTCATACATGTGTGATGAATCGTAGATTTACGAATGCCGCACTAACGGCATCCGGATCAAAG
CCGATGCGGGGGGGGGAAGC

Downstream 100 bases:

>100_bases
GGCCGGCGGGAAGCGCCGCAAGCCCATCCGGCAGCAGCAAGCGAATCTGCTGGCCGATTGCGTCATCACGTCTATTGTAG
GGCTGCTGCGCGCCCGGTCC

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 243

Protein sequence:

>244_residues
MAMQGKDRGRGSGSLVSRVGESLRQAILSGQYAAGDKLPSEHELTETHSVSRTVVREAVAALRSDGLVEVRQGAGIFVIS
PDPALSGRKVDKARVASDLEVLEIRTPVEIEAAGLAALRRSPAQEEAIFECHRKILHCIETDQSIREADLELHVAIAEAT
NNPLFKHFLESQGSAIIPQSRLVPETRTVEQTAYRKLIHREHETIIVAISDRDDQAARNAMREHLVGSQARYRNLLKDLR
SFTS

Sequences:

>Translated_244_residues
MAMQGKDRGRGSGSLVSRVGESLRQAILSGQYAAGDKLPSEHELTETHSVSRTVVREAVAALRSDGLVEVRQGAGIFVIS
PDPALSGRKVDKARVASDLEVLEIRTPVEIEAAGLAALRRSPAQEEAIFECHRKILHCIETDQSIREADLELHVAIAEAT
NNPLFKHFLESQGSAIIPQSRLVPETRTVEQTAYRKLIHREHETIIVAISDRDDQAARNAMREHLVGSQARYRNLLKDLR
SFTS
>Mature_243_residues
AMQGKDRGRGSGSLVSRVGESLRQAILSGQYAAGDKLPSEHELTETHSVSRTVVREAVAALRSDGLVEVRQGAGIFVISP
DPALSGRKVDKARVASDLEVLEIRTPVEIEAAGLAALRRSPAQEEAIFECHRKILHCIETDQSIREADLELHVAIAEATN
NPLFKHFLESQGSAIIPQSRLVPETRTVEQTAYRKLIHREHETIIVAISDRDDQAARNAMREHLVGSQARYRNLLKDLRS
FTS

Specific function: Repressor for the uxuRBA operon [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790780, Length=222, Percent_Identity=32.8828828828829, Blast_Score=94, Evalue=9e-21,
Organism=Escherichia coli, GI87082208, Length=246, Percent_Identity=29.6747967479675, Blast_Score=84, Evalue=8e-18,
Organism=Escherichia coli, GI1790032, Length=226, Percent_Identity=31.4159292035398, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI1789353, Length=217, Percent_Identity=28.5714285714286, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1786303, Length=163, Percent_Identity=34.3558282208589, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 26929; Mature: 26798

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMQGKDRGRGSGSLVSRVGESLRQAILSGQYAAGDKLPSEHELTETHSVSRTVVREAVA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
ALRSDGLVEVRQGAGIFVISPDPALSGRKVDKARVASDLEVLEIRTPVEIEAAGLAALRR
HHHCCCCEEEECCCEEEEECCCCCCCCCCCHHHHHHCCCHHEEECCCCEEHHHHHHHHHC
SPAQEEAIFECHRKILHCIETDQSIREADLELHVAIAEATNNPLFKHFLESQGSAIIPQS
CCCHHHHHHHHHHHHHHHHHCCHHHHHHCCEEEEEEECCCCCHHHHHHHHCCCCEECCHH
RLVPETRTVEQTAYRKLIHREHETIIVAISDRDDQAARNAMREHLVGSQARYRNLLKDLR
HCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHH
SFTS
HHCC
>Mature Secondary Structure 
AMQGKDRGRGSGSLVSRVGESLRQAILSGQYAAGDKLPSEHELTETHSVSRTVVREAVA
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
ALRSDGLVEVRQGAGIFVISPDPALSGRKVDKARVASDLEVLEIRTPVEIEAAGLAALRR
HHHCCCCEEEECCCEEEEECCCCCCCCCCCHHHHHHCCCHHEEECCCCEEHHHHHHHHHC
SPAQEEAIFECHRKILHCIETDQSIREADLELHVAIAEATNNPLFKHFLESQGSAIIPQS
CCCHHHHHHHHHHHHHHHHHCCHHHHHHCCEEEEEEECCCCCHHHHHHHHCCCCEECCHH
RLVPETRTVEQTAYRKLIHREHETIIVAISDRDDQAARNAMREHLVGSQARYRNLLKDLR
HCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHH
SFTS
HHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]