| Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
|---|---|
| Accession | NC_007766 |
| Length | 642,517 |
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The map label for this gene is 86361028
Identifier: 86361028
GI number: 86361028
Start: 334064
End: 335326
Strand: Direct
Name: 86361028
Synonym: RHE_PF00298
Alternate gene names: NA
Gene position: 334064-335326 (Clockwise)
Preceding gene: 86361027
Following gene: 86361035
Centisome position: 51.99
GC content: 62.63
Gene sequence:
>1263_bases ATGCCACTCGGCTCCGAGCATCCGCTGCGAAGGGAACTTCACAACGAGCTCCATGCGCGCCCGTCGCTTTACTTCGATGG CGACACCGACGTCTGGCACATCGCCATCATCGGCGACAATGCCCCTCCTTCACTGCCCGGTTCCCTGCCGGGATTGGAAG ATGTCACCACGACCGGCGAGGGCAACCACGGCATCGGCCGCGTCGGTGACGCCCGGTTGAAATGGGAAGCCCATACCGAG TTCCTTACCCTCACCTTCGTCGTGCCGGCATCGGCAGAACCGGGCAGCCAGCCACCGGAAGCCTTTCAGGCGTGCTGCCG CCAGATCGGCGGCAAGACCATAGCAGCGGTGCGCATGCTGGTGCGCGATGAAAAAGACGGGCGTCCCCTCGAAAAACCGA AGCTCGACTATGTCGCCTCGCGAGTCGGCGGGGGCGATGCGGAGGTGCATTCAAACTTCCGTCTGACGGACAGCGGCTTC GTGGAATTCCTGTTCTTCAACCGCAACCTCAATGCCTATCGCACCGGCCGCATGGTCAGGCGTTTCCTGGAGATCGAAAC ATATCGGATGATGGCGCTGCTTGCCATGCCGATGGCACGCGAGACTGTCTCAAAGCTTTCCACCTTCGATCAGCGCCTCG ACCTCCTGATCAGTCATATGCAGAGTGCGGTTAAAGTGGACAAGGCGCTGTTATCCGAGGTGACGAGGCTCTCCTCCGAT GTGCTCAACTTCTCGGCACTCGCCCGCCACCGCTTCGGCGCCACGAAAGCCTATGCCGAGATCGTGGCGAGCAGGCTGTC GGAGCTTCGGGAAGAACGGGTCGAGCAACGACAAAGGCTCGGTACGTTCATCGACCGACGCTTCCAACCCGCTGTGCGCT CGGTCTATGCCGCCGAGCGCCGCCTCGACGAACTCGCCGAACGCGTGAGCCTCGCCGGCGACCTCCTTCGGACCACTGTC CAGGTCCAGCTCGAAGATCAGAACGCCTCACTGCTGACCTCAATGGAAGAGCGGGCGCGCGTCCAGGTGCATATTCAGCA GGCGGTCGAAGGCTTCTCCGTCATCGCCATCACCTACTACACCATCGGCCTGGCGAAGATCTGCCTCGAAAGCATCTCCG CACTGGGTGTCGATCCGCATATGACGAAACTCGCCGTTCTCGGTGCCATCCCGCTGGTCCTCTTCGCCGTCTGGACCGCG GTCCGCCACGTTCGCCGAAGCATCGCCGGCGCGCCGCACAGTCCGGCGGCCGGAGGCCATTGA
Upstream 100 bases:
>100_bases CGAGAGGCTATAGGCGTTATCGGCTGGCGGGCTCGCCGGTGTCAGGCTCAACTTACGAACGTCGACCAACCGGCGGTCCA GTCCATTGAGGTGCCTCTCC
Downstream 100 bases:
>100_bases CGCGACCGCCGCCCTTTGAAGGCGGCGGCGTTCTCTTGGCTGCGTTAGCAGGACGTTACGACGCCATCGCGTAGTGGCGG TGGTTCGATGCCCGGCCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 420; Mature: 419
Protein sequence:
>420_residues MPLGSEHPLRRELHNELHARPSLYFDGDTDVWHIAIIGDNAPPSLPGSLPGLEDVTTTGEGNHGIGRVGDARLKWEAHTE FLTLTFVVPASAEPGSQPPEAFQACCRQIGGKTIAAVRMLVRDEKDGRPLEKPKLDYVASRVGGGDAEVHSNFRLTDSGF VEFLFFNRNLNAYRTGRMVRRFLEIETYRMMALLAMPMARETVSKLSTFDQRLDLLISHMQSAVKVDKALLSEVTRLSSD VLNFSALARHRFGATKAYAEIVASRLSELREERVEQRQRLGTFIDRRFQPAVRSVYAAERRLDELAERVSLAGDLLRTTV QVQLEDQNASLLTSMEERARVQVHIQQAVEGFSVIAITYYTIGLAKICLESISALGVDPHMTKLAVLGAIPLVLFAVWTA VRHVRRSIAGAPHSPAAGGH
Sequences:
>Translated_420_residues MPLGSEHPLRRELHNELHARPSLYFDGDTDVWHIAIIGDNAPPSLPGSLPGLEDVTTTGEGNHGIGRVGDARLKWEAHTE FLTLTFVVPASAEPGSQPPEAFQACCRQIGGKTIAAVRMLVRDEKDGRPLEKPKLDYVASRVGGGDAEVHSNFRLTDSGF VEFLFFNRNLNAYRTGRMVRRFLEIETYRMMALLAMPMARETVSKLSTFDQRLDLLISHMQSAVKVDKALLSEVTRLSSD VLNFSALARHRFGATKAYAEIVASRLSELREERVEQRQRLGTFIDRRFQPAVRSVYAAERRLDELAERVSLAGDLLRTTV QVQLEDQNASLLTSMEERARVQVHIQQAVEGFSVIAITYYTIGLAKICLESISALGVDPHMTKLAVLGAIPLVLFAVWTA VRHVRRSIAGAPHSPAAGGH >Mature_419_residues PLGSEHPLRRELHNELHARPSLYFDGDTDVWHIAIIGDNAPPSLPGSLPGLEDVTTTGEGNHGIGRVGDARLKWEAHTEF LTLTFVVPASAEPGSQPPEAFQACCRQIGGKTIAAVRMLVRDEKDGRPLEKPKLDYVASRVGGGDAEVHSNFRLTDSGFV EFLFFNRNLNAYRTGRMVRRFLEIETYRMMALLAMPMARETVSKLSTFDQRLDLLISHMQSAVKVDKALLSEVTRLSSDV LNFSALARHRFGATKAYAEIVASRLSELREERVEQRQRLGTFIDRRFQPAVRSVYAAERRLDELAERVSLAGDLLRTTVQ VQLEDQNASLLTSMEERARVQVHIQQAVEGFSVIAITYYTIGLAKICLESISALGVDPHMTKLAVLGAIPLVLFAVWTAV RHVRRSIAGAPHSPAAGGH
Specific function: Unknown
COG id: COG4949
COG function: function code S; Uncharacterized membrane-anchored protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46540; Mature: 46409
Theoretical pI: Translated: 7.79; Mature: 7.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLGSEHPLRRELHNELHARPSLYFDGDTDVWHIAIIGDNAPPSLPGSLPGLEDVTTTGE CCCCCCCCHHHHHHHHHHCCCCEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCC GNHGIGRVGDARLKWEAHTEFLTLTFVVPASAEPGSQPPEAFQACCRQIGGKTIAAVRML CCCCCCCCCCCEEEEEECCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHCCHHHHHHHHH VRDEKDGRPLEKPKLDYVASRVGGGDAEVHSNFRLTDSGFVEFLFFNRNLNAYRTGRMVR HHCCCCCCCCCCCHHHHHHHHCCCCCHHHCCCEEECCCCCEEEEEEECCCCHHHHHHHHH RFLEIETYRMMALLAMPMARETVSKLSTFDQRLDLLISHMQSAVKVDKALLSEVTRLSSD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLNFSALARHRFGATKAYAEIVASRLSELREERVEQRQRLGTFIDRRFQPAVRSVYAAER HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLDELAERVSLAGDLLRTTVQVQLEDQNASLLTSMEERARVQVHIQQAVEGFSVIAITYY HHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH TIGLAKICLESISALGVDPHMTKLAVLGAIPLVLFAVWTAVRHVRRSIAGAPHSPAAGGH HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure PLGSEHPLRRELHNELHARPSLYFDGDTDVWHIAIIGDNAPPSLPGSLPGLEDVTTTGE CCCCCCCHHHHHHHHHHCCCCEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCC GNHGIGRVGDARLKWEAHTEFLTLTFVVPASAEPGSQPPEAFQACCRQIGGKTIAAVRML CCCCCCCCCCCEEEEEECCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHCCHHHHHHHHH VRDEKDGRPLEKPKLDYVASRVGGGDAEVHSNFRLTDSGFVEFLFFNRNLNAYRTGRMVR HHCCCCCCCCCCCHHHHHHHHCCCCCHHHCCCEEECCCCCEEEEEEECCCCHHHHHHHHH RFLEIETYRMMALLAMPMARETVSKLSTFDQRLDLLISHMQSAVKVDKALLSEVTRLSSD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLNFSALARHRFGATKAYAEIVASRLSELREERVEQRQRLGTFIDRRFQPAVRSVYAAER HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLDELAERVSLAGDLLRTTVQVQLEDQNASLLTSMEERARVQVHIQQAVEGFSVIAITYY HHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH TIGLAKICLESISALGVDPHMTKLAVLGAIPLVLFAVWTAVRHVRRSIAGAPHSPAAGGH HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA