| Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
|---|---|
| Accession | NC_007766 |
| Length | 642,517 |
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The map label for this gene is ilvB
Identifier: 86361004
GI number: 86361004
Start: 297588
End: 299213
Strand: Direct
Name: ilvB
Synonym: RHE_PF00274
Alternate gene names: 86361004
Gene position: 297588-299213 (Clockwise)
Preceding gene: 86361003
Following gene: 86361008
Centisome position: 46.32
GC content: 61.56
Gene sequence:
>1626_bases ATGAGCAGGAAAGAAACGACCGGCCAGGCGATCACCCGTTCGCTTGTCGCCCACGGAATTGACACGATCTTCGGCATCCC CGGCGCCCATATGTATGATTTCAACGACGCGCTTTATGACGCCGGCGACAAGATCCGGTTCATTCACACCCGACATGAAC AGGGCGCAGCCTACATGGCCTACGGCTATGCCAAATCCACCGGCCGGATCGGCGCCTATACAGTCGTCCCCGGCCCGGGC GTCCTCAATTCCGGCGCGGCCCTCTGCACCGCCTACGGTGCCAATGCGCCGGTGCTCTGCATCACCGGCAACATCATGTC GCACCTGATTGGCCGAGGCAGAGGACAGCTGCACGAACTTCCGGATCAGCTCGCGACGATGCGCGGGATTACCAAGACGG CCGAGCGCATCAACCACCCGTCCGAGGCCGGTACAGTTATGGCTGGGCTCGTCGCCAAAATGCTCTCTGGCCGCCAAGGC CCGGGAGCGGTCGAAGCCCCTTGGGACGTGTTCGGACAGTCCGCCCCTGAAATCGACGTTCGGGTTGGCGCGAGAGTGCC TCATCCGGCCGTAAACCCCAATCAGATCGCCGCAGCAGCGGCGTTAATATCAGGCGCCAGCAATCCGATGATCATGGTCG GTGGCGGCGCGGCGGATGCCAGCGCGGAGATCGCCGCGTTGGCGGAATTGCTGCAGGCGCCCGTCACCTCGCATCGCTCC GGCAAGGGCATCGTCCCCGACGACCATCCGATTTATCTGAATTTCGTCGCCGCCTATGAATATTGGAAGAAGGTCGACGT GCTGATCGGGATCGGCAGCCGGCTCGAATTGCAGTTCATGCGCTGGAAGTGGCTGCCCAAGGGGCTCAAGATCATCCGCA TCGATGTCGACCCCACCGAAATGGTCCGCCTCAAGCCTGATCTCGGCATTGTCGCGGCCGCGAGAGATGGAACGCAGGCT CTAGCCGATGCGGTGGCCGGCTCCCGCCGCGAGGATCGCACGCGCGAATTTGCCGAGCTCAATGATGAGGCAAAGTCTCG TTTTTCGGCGGTGCAGCCGCAGCTTGGCTATCTCCAAGCCATTCGCGAGGCCCTGCCGAGAGACGGTTTCTTCGTCGAGG AGATCAGCCAGATGGGCTTTACCGCCCGCTTCGCCTTCCCAGTCTACGGCCCTCGCCAATACGTGACATGCGGTTACCAG GACAATCTTGGTTTCGGCTTCAACACCGCCTTAGGCGTGAAAGTCGCCCATCCCGACAAAGCCGTGATCTCCGTTTCGGG CGATGGCGGCTTCATGTTCGGCGTCCAGGAACTTGCCACCGCCGTCCAGCACAAGATCGCCGTCGTCGCCATCGTGTTCA ACAATTCCGCCTACGGCAATGTGCTGCGCGACCAGAAGCAAACCTATAAGGGCCGCACTCTCGGTTCGGATCTGACCAAT CCCGATTTCGTCGCCCTCGGAGAGAGCTTCGGCATCCGATCCTTCAGGGCGACGAGCCCCGAAGAATTGAAAAACATACT CGAGACAGCGCTCGCACTCGACGAGCCCGTCCTCATCGAAGTGCCCGTCGAAAAGGGATCGGAGGCGAGCCCCTGGCCCT TCATCCATCCGGCTCCGCACGAATGA
Upstream 100 bases:
>100_bases CTCGCCGGCATGCAGCCCGCCGATGCCGGCGCCATCGTCGCGGCGCTCCGGGCCGAAGGCTGCCTGAAATCATAACCGAA TGCACCGTTGGAGCCTCCGA
Downstream 100 bases:
>100_bases CCGGCAGGACGTGGAGCCCTATCAAGGCGATTTGAGCAAGACCGTCGCCAGCGGAGGCAGCGTCAGCCAGAGCGAATGCG GCCTGCCGTGCGCGGGTACG
Product: hypothetical protein
Products: NA
Alternate protein names: AHAS; Acetohydroxy-acid synthase large subunit; ALS [H]
Number of amino acids: Translated: 541; Mature: 540
Protein sequence:
>541_residues MSRKETTGQAITRSLVAHGIDTIFGIPGAHMYDFNDALYDAGDKIRFIHTRHEQGAAYMAYGYAKSTGRIGAYTVVPGPG VLNSGAALCTAYGANAPVLCITGNIMSHLIGRGRGQLHELPDQLATMRGITKTAERINHPSEAGTVMAGLVAKMLSGRQG PGAVEAPWDVFGQSAPEIDVRVGARVPHPAVNPNQIAAAAALISGASNPMIMVGGGAADASAEIAALAELLQAPVTSHRS GKGIVPDDHPIYLNFVAAYEYWKKVDVLIGIGSRLELQFMRWKWLPKGLKIIRIDVDPTEMVRLKPDLGIVAAARDGTQA LADAVAGSRREDRTREFAELNDEAKSRFSAVQPQLGYLQAIREALPRDGFFVEEISQMGFTARFAFPVYGPRQYVTCGYQ DNLGFGFNTALGVKVAHPDKAVISVSGDGGFMFGVQELATAVQHKIAVVAIVFNNSAYGNVLRDQKQTYKGRTLGSDLTN PDFVALGESFGIRSFRATSPEELKNILETALALDEPVLIEVPVEKGSEASPWPFIHPAPHE
Sequences:
>Translated_541_residues MSRKETTGQAITRSLVAHGIDTIFGIPGAHMYDFNDALYDAGDKIRFIHTRHEQGAAYMAYGYAKSTGRIGAYTVVPGPG VLNSGAALCTAYGANAPVLCITGNIMSHLIGRGRGQLHELPDQLATMRGITKTAERINHPSEAGTVMAGLVAKMLSGRQG PGAVEAPWDVFGQSAPEIDVRVGARVPHPAVNPNQIAAAAALISGASNPMIMVGGGAADASAEIAALAELLQAPVTSHRS GKGIVPDDHPIYLNFVAAYEYWKKVDVLIGIGSRLELQFMRWKWLPKGLKIIRIDVDPTEMVRLKPDLGIVAAARDGTQA LADAVAGSRREDRTREFAELNDEAKSRFSAVQPQLGYLQAIREALPRDGFFVEEISQMGFTARFAFPVYGPRQYVTCGYQ DNLGFGFNTALGVKVAHPDKAVISVSGDGGFMFGVQELATAVQHKIAVVAIVFNNSAYGNVLRDQKQTYKGRTLGSDLTN PDFVALGESFGIRSFRATSPEELKNILETALALDEPVLIEVPVEKGSEASPWPFIHPAPHE >Mature_540_residues SRKETTGQAITRSLVAHGIDTIFGIPGAHMYDFNDALYDAGDKIRFIHTRHEQGAAYMAYGYAKSTGRIGAYTVVPGPGV LNSGAALCTAYGANAPVLCITGNIMSHLIGRGRGQLHELPDQLATMRGITKTAERINHPSEAGTVMAGLVAKMLSGRQGP GAVEAPWDVFGQSAPEIDVRVGARVPHPAVNPNQIAAAAALISGASNPMIMVGGGAADASAEIAALAELLQAPVTSHRSG KGIVPDDHPIYLNFVAAYEYWKKVDVLIGIGSRLELQFMRWKWLPKGLKIIRIDVDPTEMVRLKPDLGIVAAARDGTQAL ADAVAGSRREDRTREFAELNDEAKSRFSAVQPQLGYLQAIREALPRDGFFVEEISQMGFTARFAFPVYGPRQYVTCGYQD NLGFGFNTALGVKVAHPDKAVISVSGDGGFMFGVQELATAVQHKIAVVAIVFNNSAYGNVLRDQKQTYKGRTLGSDLTNP DFVALGESFGIRSFRATSPEELKNILETALALDEPVLIEVPVEKGSEASPWPFIHPAPHE
Specific function: Valine and isoleucine biosynthesis; first step. [C]
COG id: COG0028
COG function: function code EH; Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TPP enzyme family [H]
Homologues:
Organism=Homo sapiens, GI93004078, Length=558, Percent_Identity=26.1648745519713, Blast_Score=144, Evalue=2e-34, Organism=Homo sapiens, GI21361361, Length=550, Percent_Identity=26, Blast_Score=134, Evalue=2e-31, Organism=Escherichia coli, GI87081685, Length=559, Percent_Identity=27.906976744186, Blast_Score=206, Evalue=3e-54, Organism=Escherichia coli, GI1790104, Length=554, Percent_Identity=29.4223826714801, Blast_Score=198, Evalue=6e-52, Organism=Escherichia coli, GI1786717, Length=562, Percent_Identity=30.2491103202847, Blast_Score=194, Evalue=9e-51, Organism=Escherichia coli, GI1787096, Length=550, Percent_Identity=28.1818181818182, Blast_Score=164, Evalue=1e-41, Organism=Escherichia coli, GI1788716, Length=556, Percent_Identity=25.7194244604317, Blast_Score=142, Evalue=7e-35, Organism=Caenorhabditis elegans, GI17542570, Length=569, Percent_Identity=23.5500878734622, Blast_Score=134, Evalue=1e-31, Organism=Caenorhabditis elegans, GI17531299, Length=560, Percent_Identity=25.7142857142857, Blast_Score=115, Evalue=5e-26, Organism=Caenorhabditis elegans, GI17531301, Length=560, Percent_Identity=25.7142857142857, Blast_Score=115, Evalue=6e-26, Organism=Saccharomyces cerevisiae, GI6323755, Length=564, Percent_Identity=26.4184397163121, Blast_Score=168, Evalue=2e-42, Organism=Saccharomyces cerevisiae, GI6320816, Length=559, Percent_Identity=26.4758497316637, Blast_Score=139, Evalue=1e-33, Organism=Drosophila melanogaster, GI19922626, Length=569, Percent_Identity=26.713532513181, Blast_Score=140, Evalue=3e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012846 - InterPro: IPR012000 - InterPro: IPR012001 - InterPro: IPR000399 - InterPro: IPR011766 [H]
Pfam domain/function: PF02775 TPP_enzyme_C; PF00205 TPP_enzyme_M; PF02776 TPP_enzyme_N [H]
EC number: =2.2.1.6 [H]
Molecular weight: Translated: 58061; Mature: 57930
Theoretical pI: Translated: 6.76; Mature: 6.76
Prosite motif: PS00187 TPP_ENZYMES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRKETTGQAITRSLVAHGIDTIFGIPGAHMYDFNDALYDAGDKIRFIHTRHEQGAAYMA CCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHCCCCEEEEEEEECCCCCEEEE YGYAKSTGRIGAYTVVPGPGVLNSGAALCTAYGANAPVLCITGNIMSHLIGRGRGQLHEL EEEECCCCCCEEEEEECCCCCCCCCCCEEEECCCCCCEEEEECHHHHHHHHCCCCHHHHH PDQLATMRGITKTAERINHPSEAGTVMAGLVAKMLSGRQGPGAVEAPWDVFGQSAPEIDV HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCEEE RVGARVPHPAVNPNQIAAAAALISGASNPMIMVGGGAADASAEIAALAELLQAPVTSHRS EECCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCHHCCCC GKGIVPDDHPIYLNFVAAYEYWKKVDVLIGIGSRLELQFMRWKWLPKGLKIIRIDVDPTE CCCCCCCCCCEEEEHHHHHHHHHHEEEEEECCCCEEEEEEHEEECCCCCEEEEEECCHHH MVRLKPDLGIVAAARDGTQALADAVAGSRREDRTREFAELNDEAKSRFSAVQPQLGYLQA EEEECCCCCEEEECCCCHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHCCCCHHHHHH IREALPRDGFFVEEISQMGFTARFAFPVYGPRQYVTCGYQDNLGFGFNTALGVKVAHPDK HHHHCCCCCCHHHHHHHCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCEEEEEEECCCC AVISVSGDGGFMFGVQELATAVQHKIAVVAIVFNNSAYGNVLRDQKQTYKGRTLGSDLTN EEEEEECCCCEEECHHHHHHHHHHCEEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCC PDFVALGESFGIRSFRATSPEELKNILETALALDEPVLIEVPVEKGSEASPWPFIHPAPH CCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCC E C >Mature Secondary Structure SRKETTGQAITRSLVAHGIDTIFGIPGAHMYDFNDALYDAGDKIRFIHTRHEQGAAYMA CCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHCCCCEEEEEEEECCCCCEEEE YGYAKSTGRIGAYTVVPGPGVLNSGAALCTAYGANAPVLCITGNIMSHLIGRGRGQLHEL EEEECCCCCCEEEEEECCCCCCCCCCCEEEECCCCCCEEEEECHHHHHHHHCCCCHHHHH PDQLATMRGITKTAERINHPSEAGTVMAGLVAKMLSGRQGPGAVEAPWDVFGQSAPEIDV HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCEEE RVGARVPHPAVNPNQIAAAAALISGASNPMIMVGGGAADASAEIAALAELLQAPVTSHRS EECCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCHHCCCC GKGIVPDDHPIYLNFVAAYEYWKKVDVLIGIGSRLELQFMRWKWLPKGLKIIRIDVDPTE CCCCCCCCCCEEEEHHHHHHHHHHEEEEEECCCCEEEEEEHEEECCCCCEEEEEECCHHH MVRLKPDLGIVAAARDGTQALADAVAGSRREDRTREFAELNDEAKSRFSAVQPQLGYLQA EEEECCCCCEEEECCCCHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHCCCCHHHHHH IREALPRDGFFVEEISQMGFTARFAFPVYGPRQYVTCGYQDNLGFGFNTALGVKVAHPDK HHHHCCCCCCHHHHHHHCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCEEEEEEECCCC AVISVSGDGGFMFGVQELATAVQHKIAVVAIVFNNSAYGNVLRDQKQTYKGRTLGSDLTN EEEEEECCCCEEECHHHHHHHHHHCEEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCC PDFVALGESFGIRSFRATSPEELKNILETALALDEPVLIEVPVEKGSEASPWPFIHPAPH CCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCC E C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]