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The map label for this gene is yvrB [H]

Identifier: 86361000

GI number: 86361000

Start: 293976

End: 294986

Strand: Direct

Name: yvrB [H]

Synonym: RHE_PF00270

Alternate gene names: 86361000

Gene position: 293976-294986 (Clockwise)

Preceding gene: 86360999

Following gene: 86361001

Centisome position: 45.75

GC content: 67.16

Gene sequence:

>1011_bases
GTGGGAGCGGTCACGGCACTGCTCCTGGCTTCCCTCTGCCTCATCGCGGTCGTCGTCGGCGTCAGCGTCGGCATCGGCGA
CCTGCCGATCCCGCTTGCGACCACCTTCTCGGCCGTCACCAACCGGCTCGGATGGACCGCGGTCGAGCTGAACCGCATCC
ATGAGACTGTCATCTGGGATTATCGGCTCAGCCGCGCGCTCGTCGCCGCCTTCTGCGGCGCGGGCCTGGCGCTCTCAGGC
GCCATCATGCAGTCGTTGCTGCGCAACCCGCTTGCCGAACCCTATGTTCTCGGCATTTCCGCAGGCGCATCCACCGGCGC
CGTCGCGATCGTCATCCTAGGGGTCGGCGCAGGTGCCGTATCGCTTTCGGCCGGGGCTTTCGCCGGCGCCTTCGCAGCCT
TCTTCTTCGTGGCGCTGCTATCGAACGGCACGCGCGGCGGCGCGGATCGCACCATCCTCGCCGGTGTCGCTGCATCGCAG
CTCTTCAACGCCTCGACCTCCTATATCGTCACCACCTCTGCCAATGCGCAGCAGGCACGCGACGTGATGTTCTGGCTGCT
CGGCAGCTTCAGCGGCGTGCGCTGGCCGGAATTCGCGCTGGTCTCGGTCGTCGTCAGCTTCGGCCTTGCCGCCTGTCTGC
TCTACGCCCGCGTGCTCGACGCCTTCGCTTTCGGCGACGAGGCGGCATCCTCGCTCGGCGTCAATGTCAGCCGCGCCAGA
ATGGCGCTCTTCGCGCTGACCGCGATGATGACAGCCACCATCGTCAGCATGGTGGGCTCGATCGGTTTCGTCGGCCTCGT
CGTGCCGCATGTCGCCCGCTTCGTCGTCGGGCCGCTCCATATCCGCCTGCTGCCGGCCTGCGCCATCGCGGGAGCGATCT
TCATGGTGCTCGCCGACATCGCCGCGCGCGCCCTCATTCCCAACCAGATCCTGCCGATCGGCGTGGTCACGGCGCTGGTC
GGCGTTCCCTTCTTCTCGATCATCCTCTACCGGTTCCAGCGCGCGTCATGA

Upstream 100 bases:

>100_bases
ACCCGACCATCCGCACGATCTACGGCGCCGAGCAGGTTGCCGAGCAGCTGAAGGCGCTTGGTCTCCTGAAGTGACGGAAG
CGGGCCGCCTCTTCCGGCAA

Downstream 100 bases:

>100_bases
GCATCAAGGCGGACAACCTCACCTGGAAAATTGGCAGGAAGACCATTCTGGACGGCGTTTCGATGGAGGCGCCGCCCGGC
CGGATGCTCGGCCTGCTCGG

Product: iron ABC transporter, permease protein

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 335

Protein sequence:

>336_residues
MGAVTALLLASLCLIAVVVGVSVGIGDLPIPLATTFSAVTNRLGWTAVELNRIHETVIWDYRLSRALVAAFCGAGLALSG
AIMQSLLRNPLAEPYVLGISAGASTGAVAIVILGVGAGAVSLSAGAFAGAFAAFFFVALLSNGTRGGADRTILAGVAASQ
LFNASTSYIVTTSANAQQARDVMFWLLGSFSGVRWPEFALVSVVVSFGLAACLLYARVLDAFAFGDEAASSLGVNVSRAR
MALFALTAMMTATIVSMVGSIGFVGLVVPHVARFVVGPLHIRLLPACAIAGAIFMVLADIAARALIPNQILPIGVVTALV
GVPFFSIILYRFQRAS

Sequences:

>Translated_336_residues
MGAVTALLLASLCLIAVVVGVSVGIGDLPIPLATTFSAVTNRLGWTAVELNRIHETVIWDYRLSRALVAAFCGAGLALSG
AIMQSLLRNPLAEPYVLGISAGASTGAVAIVILGVGAGAVSLSAGAFAGAFAAFFFVALLSNGTRGGADRTILAGVAASQ
LFNASTSYIVTTSANAQQARDVMFWLLGSFSGVRWPEFALVSVVVSFGLAACLLYARVLDAFAFGDEAASSLGVNVSRAR
MALFALTAMMTATIVSMVGSIGFVGLVVPHVARFVVGPLHIRLLPACAIAGAIFMVLADIAARALIPNQILPIGVVTALV
GVPFFSIILYRFQRAS
>Mature_335_residues
GAVTALLLASLCLIAVVVGVSVGIGDLPIPLATTFSAVTNRLGWTAVELNRIHETVIWDYRLSRALVAAFCGAGLALSGA
IMQSLLRNPLAEPYVLGISAGASTGAVAIVILGVGAGAVSLSAGAFAGAFAAFFFVALLSNGTRGGADRTILAGVAASQL
FNASTSYIVTTSANAQQARDVMFWLLGSFSGVRWPEFALVSVVVSFGLAACLLYARVLDAFAFGDEAASSLGVNVSRARM
ALFALTAMMTATIVSMVGSIGFVGLVVPHVARFVVGPLHIRLLPACAIAGAIFMVLADIAARALIPNQILPIGVVTALVG
VPFFSIILYRFQRAS

Specific function: Probably part of an ABC transporter complex. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0609

COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790740, Length=313, Percent_Identity=34.8242811501597, Blast_Score=158, Evalue=4e-40,
Organism=Escherichia coli, GI1788004, Length=281, Percent_Identity=38.7900355871886, Blast_Score=143, Evalue=1e-35,
Organism=Escherichia coli, GI1790741, Length=280, Percent_Identity=35.7142857142857, Blast_Score=129, Evalue=2e-31,
Organism=Escherichia coli, GI1786804, Length=336, Percent_Identity=30.6547619047619, Blast_Score=120, Evalue=9e-29,
Organism=Escherichia coli, GI1786805, Length=284, Percent_Identity=34.8591549295775, Blast_Score=114, Evalue=6e-27,
Organism=Escherichia coli, GI1786347, Length=327, Percent_Identity=31.4984709480122, Blast_Score=95, Evalue=6e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000522 [H]

Pfam domain/function: PF01032 FecCD [H]

EC number: NA

Molecular weight: Translated: 34508; Mature: 34377

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAVTALLLASLCLIAVVVGVSVGIGDLPIPLATTFSAVTNRLGWTAVELNRIHETVIWD
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
YRLSRALVAAFCGAGLALSGAIMQSLLRNPLAEPYVLGISAGASTGAVAIVILGVGAGAV
HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEEECCCCHH
SLSAGAFAGAFAAFFFVALLSNGTRGGADRTILAGVAASQLFNASTSYIVTTSANAQQAR
HHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCHHHHH
DVMFWLLGSFSGVRWPEFALVSVVVSFGLAACLLYARVLDAFAFGDEAASSLGVNVSRAR
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHH
MALFALTAMMTATIVSMVGSIGFVGLVVPHVARFVVGPLHIRLLPACAIAGAIFMVLADI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AARALIPNQILPIGVVTALVGVPFFSIILYRFQRAS
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GAVTALLLASLCLIAVVVGVSVGIGDLPIPLATTFSAVTNRLGWTAVELNRIHETVIWD
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
YRLSRALVAAFCGAGLALSGAIMQSLLRNPLAEPYVLGISAGASTGAVAIVILGVGAGAV
HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEEECCCCHH
SLSAGAFAGAFAAFFFVALLSNGTRGGADRTILAGVAASQLFNASTSYIVTTSANAQQAR
HHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCHHHHH
DVMFWLLGSFSGVRWPEFALVSVVVSFGLAACLLYARVLDAFAFGDEAASSLGVNVSRAR
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHH
MALFALTAMMTATIVSMVGSIGFVGLVVPHVARFVVGPLHIRLLPACAIAGAIFMVLADI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AARALIPNQILPIGVVTALVGVPFFSIILYRFQRAS
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]