| Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
|---|---|
| Accession | NC_007766 |
| Length | 642,517 |
Click here to switch to the map view.
The map label for this gene is sam [H]
Identifier: 86360975
GI number: 86360975
Start: 261023
End: 261880
Strand: Direct
Name: sam [H]
Synonym: RHE_PF00245
Alternate gene names: 86360975
Gene position: 261023-261880 (Clockwise)
Preceding gene: 86360974
Following gene: 86360977
Centisome position: 40.63
GC content: 61.89
Gene sequence:
>858_bases ATGCTGCTCGGCGATCTGCTGTTTGCGCTGAACGATGCGATGGGCAAGTGGTTGATGACCAGCTTTGCCGTCGGCCAGGT GCTGGTGATCCGCTCGCTCGGCGCTTTCATCTTGCTCGGGCCGATGATCGCACGGCAAGGGCCGATGGCCTTGTTCCGCG TCGAACAGAAAGGTCTTCAGTTCATGCGTGTGGCCATGGCGACCGGTGACGTCGCCCTGTTTTATGCGGCCGTCGCCTAT CTGCCGCTCGCCGATGTCATGACCTTCTATATGGCCGGGCCGATCTACATTGCCGCACTCTCACACTTCTTCCTCGGAGA AAAGATCGGCTGGCGGCGCTGGCTCGCCGTTCTGGTCGGCTTCGCAGGCGTCGTCATTGCGCTTCGCCCGTCGACTGCGA TGCTCTCGCTTCCCTCCCTCTTCGGCCTCGCGGGCAGCTTTTCCTTCGCGCTCTCGCTGGTCATGAGCCGCTATCTGCGC TCCACCAGCGACACGACGCTGGTGACATGGCAGACGGTCGCAGCCCTCGCCACCGGCATCGCCTTAAGCATCGACCACTG GCAGCCGGCAACACCGATCGATTGGTCCGGCATGCTGCTGCTGGGTGTCGTCGCCACATGCGCGCATCTGCTTATCACCC GCTCGCTGAAGCTCGCACCGGCATCGCTGCTGGCACCGCTGCAATATACGCTGCTGCTCTGGGCGATCGTGCTGGGTTAC ATCTTCTTCAACGATATTCCCGACCTGCAGATCGTCATCGGCGCGTCCATCATCGTCTTTGCGGGCCTCTTCATCTTCCA TCGGAAGAACCTGAAGGAAACGGTGCCGGCCGAAGCGGTCCCACCCGACGGCCATTGA
Upstream 100 bases:
>100_bases TCGGCCGCGCATGCGCGGCCTTTTTTGCGAGGATTCGGGAATGAAGACCAAGACGGCCGTCGCCAATACAGGCAACCTGA TCATGACGGGCGTCATGCTG
Downstream 100 bases:
>100_bases GATCAATCGTCCTGAGACGGCGGCGCTTCCCAGCCGAAGACGCTGCGGCCGCCGAAATCGGCGGACTGACGGAACTCGCC GGCAATGATCTCCTTGAGGT
Product: multidrug ABC transporter permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MLLGDLLFALNDAMGKWLMTSFAVGQVLVIRSLGAFILLGPMIARQGPMALFRVEQKGLQFMRVAMATGDVALFYAAVAY LPLADVMTFYMAGPIYIAALSHFFLGEKIGWRRWLAVLVGFAGVVIALRPSTAMLSLPSLFGLAGSFSFALSLVMSRYLR STSDTTLVTWQTVAALATGIALSIDHWQPATPIDWSGMLLLGVVATCAHLLITRSLKLAPASLLAPLQYTLLLWAIVLGY IFFNDIPDLQIVIGASIIVFAGLFIFHRKNLKETVPAEAVPPDGH
Sequences:
>Translated_285_residues MLLGDLLFALNDAMGKWLMTSFAVGQVLVIRSLGAFILLGPMIARQGPMALFRVEQKGLQFMRVAMATGDVALFYAAVAY LPLADVMTFYMAGPIYIAALSHFFLGEKIGWRRWLAVLVGFAGVVIALRPSTAMLSLPSLFGLAGSFSFALSLVMSRYLR STSDTTLVTWQTVAALATGIALSIDHWQPATPIDWSGMLLLGVVATCAHLLITRSLKLAPASLLAPLQYTLLLWAIVLGY IFFNDIPDLQIVIGASIIVFAGLFIFHRKNLKETVPAEAVPPDGH >Mature_285_residues MLLGDLLFALNDAMGKWLMTSFAVGQVLVIRSLGAFILLGPMIARQGPMALFRVEQKGLQFMRVAMATGDVALFYAAVAY LPLADVMTFYMAGPIYIAALSHFFLGEKIGWRRWLAVLVGFAGVVIALRPSTAMLSLPSLFGLAGSFSFALSLVMSRYLR STSDTTLVTWQTVAALATGIALSIDHWQPATPIDWSGMLLLGVVATCAHLLITRSLKLAPASLLAPLQYTLLLWAIVLGY IFFNDIPDLQIVIGASIIVFAGLFIFHRKNLKETVPAEAVPPDGH
Specific function: Transports S-adenosylmethionine [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the drug/metabolite transporter (DMT) superfamily. 10 TMS drug/metabolite exporter (TC 2.A.7.3) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 30889; Mature: 30889
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLGDLLFALNDAMGKWLMTSFAVGQVLVIRSLGAFILLGPMIARQGPMALFRVEQKGLQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH FMRVAMATGDVALFYAAVAYLPLADVMTFYMAGPIYIAALSHFFLGEKIGWRRWLAVLVG HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH FAGVVIALRPSTAMLSLPSLFGLAGSFSFALSLVMSRYLRSTSDTTLVTWQTVAALATGI HHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHH ALSIDHWQPATPIDWSGMLLLGVVATCAHLLITRSLKLAPASLLAPLQYTLLLWAIVLGY EEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH IFFNDIPDLQIVIGASIIVFAGLFIFHRKNLKETVPAEAVPPDGH HHHCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCC >Mature Secondary Structure MLLGDLLFALNDAMGKWLMTSFAVGQVLVIRSLGAFILLGPMIARQGPMALFRVEQKGLQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH FMRVAMATGDVALFYAAVAYLPLADVMTFYMAGPIYIAALSHFFLGEKIGWRRWLAVLVG HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH FAGVVIALRPSTAMLSLPSLFGLAGSFSFALSLVMSRYLRSTSDTTLVTWQTVAALATGI HHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHH ALSIDHWQPATPIDWSGMLLLGVVATCAHLLITRSLKLAPASLLAPLQYTLLLWAIVLGY EEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH IFFNDIPDLQIVIGASIIVFAGLFIFHRKNLKETVPAEAVPPDGH HHHCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA