Click here to switch to the map view.

The map label for this gene is 86360828

Identifier: 86360828

GI number: 86360828

Start: 96559

End: 97218

Strand: Direct

Name: 86360828

Synonym: RHE_PF00095

Alternate gene names: NA

Gene position: 96559-97218 (Clockwise)

Preceding gene: 86360827

Following gene: 86360829

Centisome position: 15.03

GC content: 60.61

Gene sequence:

>660_bases
ATGGACGGAACCGAGGAGCAGCCGACACTGCGGGAAAAGGCGTATGCGAGCTTTACGCGTCATCTTCTTGCACGTGACGT
GCGCCCTGGCCAGTTCGTTTCCCAGCGCCGCCTCGTGGAACTGACGGGACTGCCGCTTGGCGCCATCCGGGAGCTCATCC
CCAGGCTTGAAGCCGAAGGGCTGATCAAGACCGTGCCGCAGCGGGGTTTGCAGATCGCTCACATTGATCTCAATCTCATC
CGCGAGGCCTTCCAGCTGCGCGTGTTCCTGGAGAAGGAAGCCGTGGCCCTCTTCACCTGGTCCGCGTCGGACGAGACGAT
CGCAAAGCTCGTGAAACAGCATCGGGATATCGCCGACGCCATCCGCAGCGGCGACGGATCGCACGAATTGGAGCTGCGCG
CGCAGGCTGTCGACTGGGGCATGCATGATGCCTTTATTGACGCCCTTGGCAATACTATCATTTCGAATGCCTACCGCGTG
AACTCGATCAAGATGCGCCTGATCAGCCAGGACCGCTTTCGCATCGACGGTCACGTCGGACCCGTCATGGGCGAGCATCT
GAAGGTGCTCGAGGCGATCGAACGACGTTCGGCGGAGGACGCCGTCAACAGCCTTGTCGCACACATCAATCATGCAAGGG
ATCGTGCGCTCGGGATATAA

Upstream 100 bases:

>100_bases
ACTTCGATATCCGGTGAAGCGCGGGCGCAACTCGCTCTGGCATTCGATAATCTTTTCCGCTCGAAAGCCGCATAGGTCGG
GCATGTTTCTGGAGAAGGCG

Downstream 100 bases:

>100_bases
TCGAGAATGAACAGCCGGAGATGAGGAGATCGCCGGCAAAAGGAGGAGGATTACATGCCATCATTCTTCAACCCGACGCG
GCGCGGCTTTCTGGCCGGCA

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator GntR Family; Transcriptional Regulator; Transcriptional Regulator Protein; Transcriptional Regulator GntR Family Protein

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MDGTEEQPTLREKAYASFTRHLLARDVRPGQFVSQRRLVELTGLPLGAIRELIPRLEAEGLIKTVPQRGLQIAHIDLNLI
REAFQLRVFLEKEAVALFTWSASDETIAKLVKQHRDIADAIRSGDGSHELELRAQAVDWGMHDAFIDALGNTIISNAYRV
NSIKMRLISQDRFRIDGHVGPVMGEHLKVLEAIERRSAEDAVNSLVAHINHARDRALGI

Sequences:

>Translated_219_residues
MDGTEEQPTLREKAYASFTRHLLARDVRPGQFVSQRRLVELTGLPLGAIRELIPRLEAEGLIKTVPQRGLQIAHIDLNLI
REAFQLRVFLEKEAVALFTWSASDETIAKLVKQHRDIADAIRSGDGSHELELRAQAVDWGMHDAFIDALGNTIISNAYRV
NSIKMRLISQDRFRIDGHVGPVMGEHLKVLEAIERRSAEDAVNSLVAHINHARDRALGI
>Mature_219_residues
MDGTEEQPTLREKAYASFTRHLLARDVRPGQFVSQRRLVELTGLPLGAIRELIPRLEAEGLIKTVPQRGLQIAHIDLNLI
REAFQLRVFLEKEAVALFTWSASDETIAKLVKQHRDIADAIRSGDGSHELELRAQAVDWGMHDAFIDALGNTIISNAYRV
NSIKMRLISQDRFRIDGHVGPVMGEHLKVLEAIERRSAEDAVNSLVAHINHARDRALGI

Specific function: Unknown

COG id: COG1802

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24592; Mature: 24592

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGTEEQPTLREKAYASFTRHLLARDVRPGQFVSQRRLVELTGLPLGAIRELIPRLEAEG
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCH
LIKTVPQRGLQIAHIDLNLIREAFQLRVFLEKEAVALFTWSASDETIAKLVKQHRDIADA
HHHHHHHCCCEEEEHHHHHHHHHHHHHHHEECCEEEEEEECCCHHHHHHHHHHHHHHHHH
IRSGDGSHELELRAQAVDWGMHDAFIDALGNTIISNAYRVNSIKMRLISQDRFRIDGHVG
HHCCCCCCHHEEEHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHEEECCCCEEECCCCC
PVMGEHLKVLEAIERRSAEDAVNSLVAHINHARDRALGI
CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDGTEEQPTLREKAYASFTRHLLARDVRPGQFVSQRRLVELTGLPLGAIRELIPRLEAEG
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCH
LIKTVPQRGLQIAHIDLNLIREAFQLRVFLEKEAVALFTWSASDETIAKLVKQHRDIADA
HHHHHHHCCCEEEEHHHHHHHHHHHHHHHEECCEEEEEEECCCHHHHHHHHHHHHHHHHH
IRSGDGSHELELRAQAVDWGMHDAFIDALGNTIISNAYRVNSIKMRLISQDRFRIDGHVG
HHCCCCCCHHEEEHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHEEECCCCEEECCCCC
PVMGEHLKVLEAIERRSAEDAVNSLVAHINHARDRALGI
CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA