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The map label for this gene is ybgC [C]

Identifier: 86360746

GI number: 86360746

Start: 11716

End: 12132

Strand: Direct

Name: ybgC [C]

Synonym: RHE_PF00012

Alternate gene names: 86360746

Gene position: 11716-12132 (Clockwise)

Preceding gene: 86360744

Following gene: 86360747

Centisome position: 1.82

GC content: 61.39

Gene sequence:

>417_bases
ATGAGCGTTGACGACAGGCCTTTAGCATCGTTCCGGGTCTCGATGCGAGACATCGACATCTATGGCCATGTCCACAACTC
GGTTTATCTCGATTATTGCGAGGATGCGGTCGTCGAGTTCCTGCGCCACCGGAAGATCCTCAGCCACTTCCGCCACACCA
CCTCAGGCGTTGCATATCACGTCAAGAAGGCGGAGATCACCTTCCACAGCCCGATCGACGTCGATGATATCGTCGAGGCG
AAGGTCAAGGTCGAGAAGATCGGCCGTTCGAGCCTCTCCTTCACGATCGAGCTCTATCGCCAGCGCGATGGCGCCCACTG
CGCATCGGGCGGCCTCGTCTGGGTCTGCGTCGGCCTCTCCGACAGCCGCCCGACGCCGATCCCCGAGGCGACCAGGGCCG
CCTTGTCACAGGGCTGA

Upstream 100 bases:

>100_bases
ACCTCTTCGGCCGGCCCGAATTTTCGCACGACCGCCTGATATTGCATTTGCATCCCCCACACAGTCGGTTAGAACACGCC
GTCGAATTTTCGGTGATCGA

Downstream 100 bases:

>100_bases
CCATGCCGATCCATCGAGAGCTTCTTCGACACGTCACGGAAAGACCGGAAAAGCCGGCGGTTGTGATCGACGGCGGCTCC
CTGAGCTATGGCGAACTCTA

Product: thioesterase protein

Products: NA

Alternate protein names: Thioesterase Protein; Thioesterase; Thioesterase Family Protein; Thioesterase Family Protein Domain Protein

Number of amino acids: Translated: 138; Mature: 137

Protein sequence:

>138_residues
MSVDDRPLASFRVSMRDIDIYGHVHNSVYLDYCEDAVVEFLRHRKILSHFRHTTSGVAYHVKKAEITFHSPIDVDDIVEA
KVKVEKIGRSSLSFTIELYRQRDGAHCASGGLVWVCVGLSDSRPTPIPEATRAALSQG

Sequences:

>Translated_138_residues
MSVDDRPLASFRVSMRDIDIYGHVHNSVYLDYCEDAVVEFLRHRKILSHFRHTTSGVAYHVKKAEITFHSPIDVDDIVEA
KVKVEKIGRSSLSFTIELYRQRDGAHCASGGLVWVCVGLSDSRPTPIPEATRAALSQG
>Mature_137_residues
SVDDRPLASFRVSMRDIDIYGHVHNSVYLDYCEDAVVEFLRHRKILSHFRHTTSGVAYHVKKAEITFHSPIDVDDIVEAK
VKVEKIGRSSLSFTIELYRQRDGAHCASGGLVWVCVGLSDSRPTPIPEATRAALSQG

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15455; Mature: 15323

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVDDRPLASFRVSMRDIDIYGHVHNSVYLDYCEDAVVEFLRHRKILSHFRHTTSGVAYH
CCCCCCCHHHHEEEEEEEEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
VKKAEITFHSPIDVDDIVEAKVKVEKIGRSSLSFTIELYRQRDGAHCASGGLVWVCVGLS
EEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEECC
DSRPTPIPEATRAALSQG
CCCCCCCCHHHHHHHCCC
>Mature Secondary Structure 
SVDDRPLASFRVSMRDIDIYGHVHNSVYLDYCEDAVVEFLRHRKILSHFRHTTSGVAYH
CCCCCCHHHHEEEEEEEEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
VKKAEITFHSPIDVDDIVEAKVKVEKIGRSSLSFTIELYRQRDGAHCASGGLVWVCVGLS
EEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEECC
DSRPTPIPEATRAALSQG
CCCCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA