Definition Rhizobium etli CFN 42 plasmid p42f, complete sequence.
Accession NC_007766
Length 642,517

Click here to switch to the map view.

The map label for this gene is 86360740

Identifier: 86360740

GI number: 86360740

Start: 6832

End: 7824

Strand: Direct

Name: 86360740

Synonym: RHE_PF00006

Alternate gene names: NA

Gene position: 6832-7824 (Clockwise)

Preceding gene: 86360739

Following gene: 86360743

Centisome position: 1.06

GC content: 64.25

Gene sequence:

>993_bases
ATGTGGACAGGCGTGCCGTGTGGGTGCCACACGGCACCCTATCCACTTTATCCTGAGGTCCGAAAGCGGAGTCTCGAAGA
ACACGCCGAAACGCGGCTGCGGCTCTCTTGGACCCTTGGCCGCCAATGCGGCGAATCTCCCCGGCTGCCAGCGCATCCTC
GCGCTCGAAACCGACGGCTGGGAAATCCGCCCTGTACATACGCGACACGCGCGACGCTTCTGCAAGACGCCTTTCCGCTA
ACGAGGTACAATACCGAAAGGCGAGAGCGTCAGCAGATCGGGATCATCGGTCGACATCGCCTTCGCCACCTGGGCATGGC
TCATGCTGTAGCCGTAGGCAAGAACGCGCACACCGTCGATCATGAAGAACTGCGCTTGATCCAGGCCGGGCCGCAGCGCG
CCCGTCACGGTGACGGTCTCGTACATTCTCTCAAGATGCAAAGGCTCCTGCGGAACGACACGCACCAGCTGGTTGGGTGG
AGGGGAGGGCATGTGGCTGCAGGCTCCGGCCCAGGGCACCAGTATGAATTCGTAGACAAGGTCGCCGTCCTGGTCGATCG
GCAGGACGAAGCCCGTCAAGTCGACCGGATGTCTCTCATCATGCCAGGCAAGTGTTTCGCCCTGCGGAGCGCTGACCGCC
TTGCCCGACAGCGGCACTGTCGCCTTGGCCTGATCGGCCGGCCGCAAAGCGCTCCAGAAAATGGGCCGCGCTGCAGCGAA
GGTGTCGCAAAACGGCCATGCGAAACCGAATGCCAGCATCGCGCACGTCAGGAAAAACGGTCTCAGCTTCATCATCGCAT
CTCCCCGGGCCGGTTGCGACCGCCTGCCACTGCGGCACGGATGCTACTCCCGATCCGGCTCGCCCGTCCATCCGCCGAGC
TCCCTATGCCTAGCCGTCGGCGAATGCTGGCCGAGCAGCTCGGCGGCGATCGGCGGCAGCGAGGCGGCCTCCGCAAGCCC
GGCGGACCCGAGACGATTTGCGAGCGGCTTTGA

Upstream 100 bases:

>100_bases
CGTGACGATCCGCGACATGGTGATCCTGCCGAGCTCCTTCGACATTTAGCTTGAGCGGGAGGCAGAGCGCACTCCTTCCG
CACAAGCTGACTGCGGGAGG

Downstream 100 bases:

>100_bases
GGGCCTCTCGCCGCTAAGAGTAGGCTGCCAGGCTATTCATGTCATGCACTTAACAACCATTCGCACCGTCATGTCTGGCT
CACGGATTGACCCATCGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MWTGVPCGCHTAPYPLYPEVRKRSLEEHAETRLRLSWTLGRQCGESPRLPAHPRARNRRLGNPPCTYATRATLLQDAFPL
TRYNTERRERQQIGIIGRHRLRHLGMAHAVAVGKNAHTVDHEELRLIQAGPQRARHGDGLVHSLKMQRLLRNDTHQLVGW
RGGHVAAGSGPGHQYEFVDKVAVLVDRQDEARQVDRMSLIMPGKCFALRSADRLARQRHCRLGLIGRPQSAPENGPRCSE
GVAKRPCETECQHRARQEKRSQLHHRISPGRLRPPATAARMLLPIRLARPSAELPMPSRRRMLAEQLGGDRRQRGGLRKP
GGPETICERL

Sequences:

>Translated_330_residues
MWTGVPCGCHTAPYPLYPEVRKRSLEEHAETRLRLSWTLGRQCGESPRLPAHPRARNRRLGNPPCTYATRATLLQDAFPL
TRYNTERRERQQIGIIGRHRLRHLGMAHAVAVGKNAHTVDHEELRLIQAGPQRARHGDGLVHSLKMQRLLRNDTHQLVGW
RGGHVAAGSGPGHQYEFVDKVAVLVDRQDEARQVDRMSLIMPGKCFALRSADRLARQRHCRLGLIGRPQSAPENGPRCSE
GVAKRPCETECQHRARQEKRSQLHHRISPGRLRPPATAARMLLPIRLARPSAELPMPSRRRMLAEQLGGDRRQRGGLRKP
GGPETICERL
>Mature_330_residues
MWTGVPCGCHTAPYPLYPEVRKRSLEEHAETRLRLSWTLGRQCGESPRLPAHPRARNRRLGNPPCTYATRATLLQDAFPL
TRYNTERRERQQIGIIGRHRLRHLGMAHAVAVGKNAHTVDHEELRLIQAGPQRARHGDGLVHSLKMQRLLRNDTHQLVGW
RGGHVAAGSGPGHQYEFVDKVAVLVDRQDEARQVDRMSLIMPGKCFALRSADRLARQRHCRLGLIGRPQSAPENGPRCSE
GVAKRPCETECQHRARQEKRSQLHHRISPGRLRPPATAARMLLPIRLARPSAELPMPSRRRMLAEQLGGDRRQRGGLRKP
GGPETICERL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37331; Mature: 37331

Theoretical pI: Translated: 11.69; Mature: 11.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWTGVPCGCHTAPYPLYPEVRKRSLEEHAETRLRLSWTLGRQCGESPRLPAHPRARNRRL
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEEHHHHHCCCCCCCCCCCCHHCCCC
GNPPCTYATRATLLQDAFPLTRYNTERRERQQIGIIGRHRLRHLGMAHAVAVGKNAHTVD
CCCCCCHHHHHHHHHHHCCHHHCCHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCC
HEELRLIQAGPQRARHGDGLVHSLKMQRLLRNDTHQLVGWRGGHVAAGSGPGHQYEFVDK
HHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHCCHHHHHCCCCCEEECCCCCCCHHHHHHH
VAVLVDRQDEARQVDRMSLIMPGKCFALRSADRLARQRHCRLGLIGRPQSAPENGPRCSE
HHHHHCCCHHHHHHHHHHEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHH
GVAKRPCETECQHRARQEKRSQLHHRISPGRLRPPATAARMLLPIRLARPSAELPMPSRR
HHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHH
RMLAEQLGGDRRQRGGLRKPGGPETICERL
HHHHHHHCCCHHHHCCCCCCCCHHHHHHCC
>Mature Secondary Structure
MWTGVPCGCHTAPYPLYPEVRKRSLEEHAETRLRLSWTLGRQCGESPRLPAHPRARNRRL
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEEHHHHHCCCCCCCCCCCCHHCCCC
GNPPCTYATRATLLQDAFPLTRYNTERRERQQIGIIGRHRLRHLGMAHAVAVGKNAHTVD
CCCCCCHHHHHHHHHHHCCHHHCCHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCC
HEELRLIQAGPQRARHGDGLVHSLKMQRLLRNDTHQLVGWRGGHVAAGSGPGHQYEFVDK
HHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHCCHHHHHCCCCCEEECCCCCCCHHHHHHH
VAVLVDRQDEARQVDRMSLIMPGKCFALRSADRLARQRHCRLGLIGRPQSAPENGPRCSE
HHHHHCCCHHHHHHHHHHEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHH
GVAKRPCETECQHRARQEKRSQLHHRISPGRLRPPATAARMLLPIRLARPSAELPMPSRR
HHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHH
RMLAEQLGGDRRQRGGLRKPGGPETICERL
HHHHHHHCCCHHHHCCCCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA