| Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
|---|---|
| Accession | NC_007766 |
| Length | 642,517 |
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The map label for this gene is 86360740
Identifier: 86360740
GI number: 86360740
Start: 6832
End: 7824
Strand: Direct
Name: 86360740
Synonym: RHE_PF00006
Alternate gene names: NA
Gene position: 6832-7824 (Clockwise)
Preceding gene: 86360739
Following gene: 86360743
Centisome position: 1.06
GC content: 64.25
Gene sequence:
>993_bases ATGTGGACAGGCGTGCCGTGTGGGTGCCACACGGCACCCTATCCACTTTATCCTGAGGTCCGAAAGCGGAGTCTCGAAGA ACACGCCGAAACGCGGCTGCGGCTCTCTTGGACCCTTGGCCGCCAATGCGGCGAATCTCCCCGGCTGCCAGCGCATCCTC GCGCTCGAAACCGACGGCTGGGAAATCCGCCCTGTACATACGCGACACGCGCGACGCTTCTGCAAGACGCCTTTCCGCTA ACGAGGTACAATACCGAAAGGCGAGAGCGTCAGCAGATCGGGATCATCGGTCGACATCGCCTTCGCCACCTGGGCATGGC TCATGCTGTAGCCGTAGGCAAGAACGCGCACACCGTCGATCATGAAGAACTGCGCTTGATCCAGGCCGGGCCGCAGCGCG CCCGTCACGGTGACGGTCTCGTACATTCTCTCAAGATGCAAAGGCTCCTGCGGAACGACACGCACCAGCTGGTTGGGTGG AGGGGAGGGCATGTGGCTGCAGGCTCCGGCCCAGGGCACCAGTATGAATTCGTAGACAAGGTCGCCGTCCTGGTCGATCG GCAGGACGAAGCCCGTCAAGTCGACCGGATGTCTCTCATCATGCCAGGCAAGTGTTTCGCCCTGCGGAGCGCTGACCGCC TTGCCCGACAGCGGCACTGTCGCCTTGGCCTGATCGGCCGGCCGCAAAGCGCTCCAGAAAATGGGCCGCGCTGCAGCGAA GGTGTCGCAAAACGGCCATGCGAAACCGAATGCCAGCATCGCGCACGTCAGGAAAAACGGTCTCAGCTTCATCATCGCAT CTCCCCGGGCCGGTTGCGACCGCCTGCCACTGCGGCACGGATGCTACTCCCGATCCGGCTCGCCCGTCCATCCGCCGAGC TCCCTATGCCTAGCCGTCGGCGAATGCTGGCCGAGCAGCTCGGCGGCGATCGGCGGCAGCGAGGCGGCCTCCGCAAGCCC GGCGGACCCGAGACGATTTGCGAGCGGCTTTGA
Upstream 100 bases:
>100_bases CGTGACGATCCGCGACATGGTGATCCTGCCGAGCTCCTTCGACATTTAGCTTGAGCGGGAGGCAGAGCGCACTCCTTCCG CACAAGCTGACTGCGGGAGG
Downstream 100 bases:
>100_bases GGGCCTCTCGCCGCTAAGAGTAGGCTGCCAGGCTATTCATGTCATGCACTTAACAACCATTCGCACCGTCATGTCTGGCT CACGGATTGACCCATCGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 330; Mature: 330
Protein sequence:
>330_residues MWTGVPCGCHTAPYPLYPEVRKRSLEEHAETRLRLSWTLGRQCGESPRLPAHPRARNRRLGNPPCTYATRATLLQDAFPL TRYNTERRERQQIGIIGRHRLRHLGMAHAVAVGKNAHTVDHEELRLIQAGPQRARHGDGLVHSLKMQRLLRNDTHQLVGW RGGHVAAGSGPGHQYEFVDKVAVLVDRQDEARQVDRMSLIMPGKCFALRSADRLARQRHCRLGLIGRPQSAPENGPRCSE GVAKRPCETECQHRARQEKRSQLHHRISPGRLRPPATAARMLLPIRLARPSAELPMPSRRRMLAEQLGGDRRQRGGLRKP GGPETICERL
Sequences:
>Translated_330_residues MWTGVPCGCHTAPYPLYPEVRKRSLEEHAETRLRLSWTLGRQCGESPRLPAHPRARNRRLGNPPCTYATRATLLQDAFPL TRYNTERRERQQIGIIGRHRLRHLGMAHAVAVGKNAHTVDHEELRLIQAGPQRARHGDGLVHSLKMQRLLRNDTHQLVGW RGGHVAAGSGPGHQYEFVDKVAVLVDRQDEARQVDRMSLIMPGKCFALRSADRLARQRHCRLGLIGRPQSAPENGPRCSE GVAKRPCETECQHRARQEKRSQLHHRISPGRLRPPATAARMLLPIRLARPSAELPMPSRRRMLAEQLGGDRRQRGGLRKP GGPETICERL >Mature_330_residues MWTGVPCGCHTAPYPLYPEVRKRSLEEHAETRLRLSWTLGRQCGESPRLPAHPRARNRRLGNPPCTYATRATLLQDAFPL TRYNTERRERQQIGIIGRHRLRHLGMAHAVAVGKNAHTVDHEELRLIQAGPQRARHGDGLVHSLKMQRLLRNDTHQLVGW RGGHVAAGSGPGHQYEFVDKVAVLVDRQDEARQVDRMSLIMPGKCFALRSADRLARQRHCRLGLIGRPQSAPENGPRCSE GVAKRPCETECQHRARQEKRSQLHHRISPGRLRPPATAARMLLPIRLARPSAELPMPSRRRMLAEQLGGDRRQRGGLRKP GGPETICERL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37331; Mature: 37331
Theoretical pI: Translated: 11.69; Mature: 11.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWTGVPCGCHTAPYPLYPEVRKRSLEEHAETRLRLSWTLGRQCGESPRLPAHPRARNRRL CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEEHHHHHCCCCCCCCCCCCHHCCCC GNPPCTYATRATLLQDAFPLTRYNTERRERQQIGIIGRHRLRHLGMAHAVAVGKNAHTVD CCCCCCHHHHHHHHHHHCCHHHCCHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCC HEELRLIQAGPQRARHGDGLVHSLKMQRLLRNDTHQLVGWRGGHVAAGSGPGHQYEFVDK HHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHCCHHHHHCCCCCEEECCCCCCCHHHHHHH VAVLVDRQDEARQVDRMSLIMPGKCFALRSADRLARQRHCRLGLIGRPQSAPENGPRCSE HHHHHCCCHHHHHHHHHHEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHH GVAKRPCETECQHRARQEKRSQLHHRISPGRLRPPATAARMLLPIRLARPSAELPMPSRR HHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHH RMLAEQLGGDRRQRGGLRKPGGPETICERL HHHHHHHCCCHHHHCCCCCCCCHHHHHHCC >Mature Secondary Structure MWTGVPCGCHTAPYPLYPEVRKRSLEEHAETRLRLSWTLGRQCGESPRLPAHPRARNRRL CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEEHHHHHCCCCCCCCCCCCHHCCCC GNPPCTYATRATLLQDAFPLTRYNTERRERQQIGIIGRHRLRHLGMAHAVAVGKNAHTVD CCCCCCHHHHHHHHHHHCCHHHCCHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCC HEELRLIQAGPQRARHGDGLVHSLKMQRLLRNDTHQLVGWRGGHVAAGSGPGHQYEFVDK HHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHCCHHHHHCCCCCEEECCCCCCCHHHHHHH VAVLVDRQDEARQVDRMSLIMPGKCFALRSADRLARQRHCRLGLIGRPQSAPENGPRCSE HHHHHCCCHHHHHHHHHHEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHH GVAKRPCETECQHRARQEKRSQLHHRISPGRLRPPATAARMLLPIRLARPSAELPMPSRR HHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHH RMLAEQLGGDRRQRGGLRKPGGPETICERL HHHHHHHCCCHHHHCCCCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA