| Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
|---|---|
| Accession | NC_007766 |
| Length | 642,517 |
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The map label for this gene is katG
Identifier: 86360738
GI number: 86360738
Start: 3559
End: 5745
Strand: Direct
Name: katG
Synonym: RHE_PF00004
Alternate gene names: 86360738
Gene position: 3559-5745 (Clockwise)
Preceding gene: 86360736
Following gene: 86360739
Centisome position: 0.55
GC content: 64.56
Gene sequence:
>2187_bases ATGGACAACCCCACTGACACCGCAGGCAAATGTCCTGTGGCCCATGGCAACAAGCCGCGCGGCCCTTCCAACCGCGACTG GTGGCCGAACCAGCTGAACGTGCAGATTCTTCATCACAATTCCGGCCGCGCCGATCCGCTCGGTAAGGACTTCGATTATG CCGAAGAGTTCAAGAAGCTCGATCTCGACGCGCTGAAAAAGGACCTTCACGCGCTGATGACGGATTCGCAGGACTGGTGG CCGGCCGACTTCGGTCATTATGGCGGCCTCTTCATCCGCATGGCCTGGCACAGCGCCGGCACCTATCGCATCACCGACGG GCGCGGCGGCGCCGGGCAGGGTCAGCAGCGTTTTGCGCCGCTGAACAGCTGGCCGGACAATGCCAACCTTGACAAGGCCC GCCGTCTGCTTTGGCCGATCAAGCAGAAATACGGCAACCGCATCTCCTGGGCCGACCTTCTGATCCTCACCGGCAACGTC GCGCTCGAGTCCATGGGCTTTAAGACCTTCGGCTTCGCCGGCGGCCGCGCCGACGTCTGGGAGCCGGAAGAGCTCTACTG GGGTCCTGAAGGCACCTGGCTCGGCGACGAGCGCTATAGCGGCGAACGCCAGCTGGCCGAACCGCTTGGCGCCGTGCAGA TGGGTCTCATCTACGTCAATCCCGAAGGCCCGAATGGCAATCCTGACCCGGTCGCTGCAGCGCGCGACATTCGCGAAACC TTCGCCCGCATGGCGATGAACGACGAGGAAACCGTGGCACTGATCGCCGGCGGTCATACCTTCGGCAAGACGCATGGCGC CGGCGATCCGTCCTTCATCGGCGCCGAGCCGGAAGGCGGCGCGATCGAGGACCAGGGCCTCGGCTGGAAGAGCTCTTTCG GCACCGGCGTCGGCAAGGACGCCATTACCGCCGGCCTCGAGGTTACCTGGTCGCAGACGCCGACCAAGTGGAGCAACTAC TTCTTCGAAAACCTCTTTGCTTACGAGTGGGAGCTGACGAAGAGCCCGGCCGGGGCGCATCAGTGGCGGGCGAAGAACGC CGAAGCCTCAATTCCGGATGCCTATGAGCCGGGGAAGAAGCATGTCCCGACGATGCTGACCACGGATCTTTCGCTCCGCT TCGATCCGATCTACGAAAAAATCTCGCGCCGCTTCCTGGAGAATCCGGATCAGTTCGCCGACGCTTTCGCCCGCGCCTGG TTCAAGCTGACCCACCGCGACATGGGACCGAAAGTGCGTTACCTCGGCCCCGAAGTTCCGGCCGAAGACCTGATCTGGCA GGACGTGATCCCCGCCGTCGACCATCCCCTCGTCGACGACAAGGACATTGCCGAACTCAAGGCAAAGGTTCTCGCCACCG GCCTCACCGTGCAGGAATTGGTCTCGACCGCCTGGGCCTCGGCCTCGACCTTCCGCGGCTCCGACAAGCGCGGCGGCGCC AATGGCGCGCGCATCCGCCTTGCTCCGCAGAAGGATTGGGAAGCCAACCAGCCGGCCCAGCTCGCCAAGGTGCTCGGCGT TCTCGAAGGGATCCAGAAGGACTTCAACGCCGCCCAGACGGGGGCTAAGAAGATCTCGCTCGCCGACCTGATCGTTCTCG CCGGTGCCGCCGGTGTCGAGAAGGCGGCGGCAGCCGGCGGCAACGCCGTCAGCGTGCCCCTCACGCCGGGCCGCATGGAC GCGTCCGAAGCCCAGACCGACGCGCATTCATTCGCGCCGCTCGAGCCGCGCATCGACGGCTTCCGCAACTATGTGAACGG CAAGCGCCTGCAGTTCATGAAGCCGGAAGAAGCGCTCGTCGACCGCGCCCAGCTCTTGACGCTGACCGGACCCGAGATGA CCGTTCTCGTCGGCGGCCTGCGCGTGCTGAAGGCTGGCAACCCCGAGCATGGCGTGTTCACCTCGCGTCCAGAAACGCTG ACGAACGACTTTTTTGTCAACCTGCTCGACGTGGCGACGCAGTGGGTTCCGGCCACCGGAAAGGAAGGCGTCTATGAGGG CCGCGACCGCAAGACGGGTGCCGCCAAATGGACCGGCACCCGCGTCGACCTGATCTTCGGCTCGCACTCGCAGCTGCGCG CCTTCGCCGAAGTCTACGGCCAGGCCGACGCCAAGCAGAAGTTCGTCAAGGACTTCGTCGCCGCCTGGAACAAGGTCATG AACGCCGACCGCTTCGACCTCGTCTGA
Upstream 100 bases:
>100_bases TTGAACGGTTCCGATATGAAGACTGCAAGGGAGAGAGTGGGGCGCTAGCTCGGCTCATCTTTTTGAACCGCAGACAGATC AAACAATGAAGGAGACGATC
Downstream 100 bases:
>100_bases TCGGTTCCGCCAATTTTGCCCGGGCGCGGCTTCGGCCGCGCCCGGTCTTTTTGCGACTCCTCGGGGTGGCGACGACCGTC GAAGCTTCCGATCCTCCCGC
Product: catalase protein
Products: NA
Alternate protein names: CP; Peroxidase/catalase [H]
Number of amino acids: Translated: 728; Mature: 728
Protein sequence:
>728_residues MDNPTDTAGKCPVAHGNKPRGPSNRDWWPNQLNVQILHHNSGRADPLGKDFDYAEEFKKLDLDALKKDLHALMTDSQDWW PADFGHYGGLFIRMAWHSAGTYRITDGRGGAGQGQQRFAPLNSWPDNANLDKARRLLWPIKQKYGNRISWADLLILTGNV ALESMGFKTFGFAGGRADVWEPEELYWGPEGTWLGDERYSGERQLAEPLGAVQMGLIYVNPEGPNGNPDPVAAARDIRET FARMAMNDEETVALIAGGHTFGKTHGAGDPSFIGAEPEGGAIEDQGLGWKSSFGTGVGKDAITAGLEVTWSQTPTKWSNY FFENLFAYEWELTKSPAGAHQWRAKNAEASIPDAYEPGKKHVPTMLTTDLSLRFDPIYEKISRRFLENPDQFADAFARAW FKLTHRDMGPKVRYLGPEVPAEDLIWQDVIPAVDHPLVDDKDIAELKAKVLATGLTVQELVSTAWASASTFRGSDKRGGA NGARIRLAPQKDWEANQPAQLAKVLGVLEGIQKDFNAAQTGAKKISLADLIVLAGAAGVEKAAAAGGNAVSVPLTPGRMD ASEAQTDAHSFAPLEPRIDGFRNYVNGKRLQFMKPEEALVDRAQLLTLTGPEMTVLVGGLRVLKAGNPEHGVFTSRPETL TNDFFVNLLDVATQWVPATGKEGVYEGRDRKTGAAKWTGTRVDLIFGSHSQLRAFAEVYGQADAKQKFVKDFVAAWNKVM NADRFDLV
Sequences:
>Translated_728_residues MDNPTDTAGKCPVAHGNKPRGPSNRDWWPNQLNVQILHHNSGRADPLGKDFDYAEEFKKLDLDALKKDLHALMTDSQDWW PADFGHYGGLFIRMAWHSAGTYRITDGRGGAGQGQQRFAPLNSWPDNANLDKARRLLWPIKQKYGNRISWADLLILTGNV ALESMGFKTFGFAGGRADVWEPEELYWGPEGTWLGDERYSGERQLAEPLGAVQMGLIYVNPEGPNGNPDPVAAARDIRET FARMAMNDEETVALIAGGHTFGKTHGAGDPSFIGAEPEGGAIEDQGLGWKSSFGTGVGKDAITAGLEVTWSQTPTKWSNY FFENLFAYEWELTKSPAGAHQWRAKNAEASIPDAYEPGKKHVPTMLTTDLSLRFDPIYEKISRRFLENPDQFADAFARAW FKLTHRDMGPKVRYLGPEVPAEDLIWQDVIPAVDHPLVDDKDIAELKAKVLATGLTVQELVSTAWASASTFRGSDKRGGA NGARIRLAPQKDWEANQPAQLAKVLGVLEGIQKDFNAAQTGAKKISLADLIVLAGAAGVEKAAAAGGNAVSVPLTPGRMD ASEAQTDAHSFAPLEPRIDGFRNYVNGKRLQFMKPEEALVDRAQLLTLTGPEMTVLVGGLRVLKAGNPEHGVFTSRPETL TNDFFVNLLDVATQWVPATGKEGVYEGRDRKTGAAKWTGTRVDLIFGSHSQLRAFAEVYGQADAKQKFVKDFVAAWNKVM NADRFDLV >Mature_728_residues MDNPTDTAGKCPVAHGNKPRGPSNRDWWPNQLNVQILHHNSGRADPLGKDFDYAEEFKKLDLDALKKDLHALMTDSQDWW PADFGHYGGLFIRMAWHSAGTYRITDGRGGAGQGQQRFAPLNSWPDNANLDKARRLLWPIKQKYGNRISWADLLILTGNV ALESMGFKTFGFAGGRADVWEPEELYWGPEGTWLGDERYSGERQLAEPLGAVQMGLIYVNPEGPNGNPDPVAAARDIRET FARMAMNDEETVALIAGGHTFGKTHGAGDPSFIGAEPEGGAIEDQGLGWKSSFGTGVGKDAITAGLEVTWSQTPTKWSNY FFENLFAYEWELTKSPAGAHQWRAKNAEASIPDAYEPGKKHVPTMLTTDLSLRFDPIYEKISRRFLENPDQFADAFARAW FKLTHRDMGPKVRYLGPEVPAEDLIWQDVIPAVDHPLVDDKDIAELKAKVLATGLTVQELVSTAWASASTFRGSDKRGGA NGARIRLAPQKDWEANQPAQLAKVLGVLEGIQKDFNAAQTGAKKISLADLIVLAGAAGVEKAAAAGGNAVSVPLTPGRMD ASEAQTDAHSFAPLEPRIDGFRNYVNGKRLQFMKPEEALVDRAQLLTLTGPEMTVLVGGLRVLKAGNPEHGVFTSRPETL TNDFFVNLLDVATQWVPATGKEGVYEGRDRKTGAAKWTGTRVDLIFGSHSQLRAFAEVYGQADAKQKFVKDFVAAWNKVM NADRFDLV
Specific function: Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity [H]
COG id: COG0376
COG function: function code P; Catalase (peroxidase I)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peroxidase family. Peroxidase/catalase subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790378, Length=733, Percent_Identity=62.0736698499318, Blast_Score=869, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000763 - InterPro: IPR010255 - InterPro: IPR002016 - InterPro: IPR019794 - InterPro: IPR019793 [H]
Pfam domain/function: PF00141 peroxidase [H]
EC number: =1.11.1.6; =1.11.1.7 [H]
Molecular weight: Translated: 79871; Mature: 79871
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: PS00435 PEROXIDASE_1 ; PS00436 PEROXIDASE_2 ; PS50873 PEROXIDASE_4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNPTDTAGKCPVAHGNKPRGPSNRDWWPNQLNVQILHHNSGRADPLGKDFDYAEEFKKL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHC DLDALKKDLHALMTDSQDWWPADFGHYGGLFIRMAWHSAGTYRITDGRGGAGQGQQRFAP CHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCHHHCCC LNSWPDNANLDKARRLLWPIKQKYGNRISWADLLILTGNVALESMGFKTFGFAGGRADVW CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHCCCCEEECCCCCCCCC EPEELYWGPEGTWLGDERYSGERQLAEPLGAVQMGLIYVNPEGPNGNPDPVAAARDIRET CHHHEEECCCCCCCCCHHCCCHHHHHHHHCCEEEEEEEECCCCCCCCCCHHHHHHHHHHH FARMAMNDEETVALIAGGHTFGKTHGAGDPSFIGAEPEGGAIEDQGLGWKSSFGTGVGKD HHHHHCCCCCEEEEEECCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCHH AITAGLEVTWSQTPTKWSNYFFENLFAYEWELTKSPAGAHQWRAKNAEASIPDAYEPGKK HHHCCCEEEECCCCCHHHHHHHHHHHEEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCCC HVPTMLTTDLSLRFDPIYEKISRRFLENPDQFADAFARAWFKLTHRDMGPKVRYLGPEVP CCCEEEEECCCEEECHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCC AEDLIWQDVIPAVDHPLVDDKDIAELKAKVLATGLTVQELVSTAWASASTFRGSDKRGGA HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCHHCCCCCCCCCC NGARIRLAPQKDWEANQPAQLAKVLGVLEGIQKDFNAAQTGAKKISLADLIVLAGAAGVE CCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHH KAAAAGGNAVSVPLTPGRMDASEAQTDAHSFAPLEPRIDGFRNYVNGKRLQFMKPEEALV HHHHCCCCEEEECCCCCCCCHHHHHCCHHCCCCCCCHHHHHHHHCCCCEEEEECCHHHHH DRAQLLTLTGPEMTVLVGGLRVLKAGNPEHGVFTSRPETLTNDFFVNLLDVATQWVPATG CHHHEEEECCCCCEEEECCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC KEGVYEGRDRKTGAAKWTGTRVDLIFGSHSQLRAFAEVYGQADAKQKFVKDFVAAWNKVM CCCCCCCCCCCCCCCEECCCEEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH NADRFDLV CCCHHCCC >Mature Secondary Structure MDNPTDTAGKCPVAHGNKPRGPSNRDWWPNQLNVQILHHNSGRADPLGKDFDYAEEFKKL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHC DLDALKKDLHALMTDSQDWWPADFGHYGGLFIRMAWHSAGTYRITDGRGGAGQGQQRFAP CHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCHHHCCC LNSWPDNANLDKARRLLWPIKQKYGNRISWADLLILTGNVALESMGFKTFGFAGGRADVW CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHCCCCEEECCCCCCCCC EPEELYWGPEGTWLGDERYSGERQLAEPLGAVQMGLIYVNPEGPNGNPDPVAAARDIRET CHHHEEECCCCCCCCCHHCCCHHHHHHHHCCEEEEEEEECCCCCCCCCCHHHHHHHHHHH FARMAMNDEETVALIAGGHTFGKTHGAGDPSFIGAEPEGGAIEDQGLGWKSSFGTGVGKD HHHHHCCCCCEEEEEECCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCHH AITAGLEVTWSQTPTKWSNYFFENLFAYEWELTKSPAGAHQWRAKNAEASIPDAYEPGKK HHHCCCEEEECCCCCHHHHHHHHHHHEEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCCC HVPTMLTTDLSLRFDPIYEKISRRFLENPDQFADAFARAWFKLTHRDMGPKVRYLGPEVP CCCEEEEECCCEEECHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCC AEDLIWQDVIPAVDHPLVDDKDIAELKAKVLATGLTVQELVSTAWASASTFRGSDKRGGA HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCHHCCCCCCCCCC NGARIRLAPQKDWEANQPAQLAKVLGVLEGIQKDFNAAQTGAKKISLADLIVLAGAAGVE CCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHH KAAAAGGNAVSVPLTPGRMDASEAQTDAHSFAPLEPRIDGFRNYVNGKRLQFMKPEEALV HHHHCCCCEEEECCCCCCCCHHHHHCCHHCCCCCCCHHHHHHHHCCCCEEEEECCHHHHH DRAQLLTLTGPEMTVLVGGLRVLKAGNPEHGVFTSRPETLTNDFFVNLLDVATQWVPATG CHHHEEEECCCCCEEEECCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC KEGVYEGRDRKTGAAKWTGTRVDLIFGSHSQLRAFAEVYGQADAKQKFVKDFVAAWNKVM CCCCCCCCCCCCCCCEECCCEEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH NADRFDLV CCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA