Click here to switch to the map view.

The map label for this gene is 85861007

Identifier: 85861007

GI number: 85861007

Start: 3171144

End: 3172046

Strand: Direct

Name: 85861007

Synonym: SYN_02059

Alternate gene names: NA

Gene position: 3171144-3172046 (Clockwise)

Preceding gene: 85861005

Following gene: 85861008

Centisome position: 99.74

GC content: 60.58

Gene sequence:

>903_bases
ATGAACCGCAGAGATTTCCTGAAATCCGCACTGATTACCGGGGCGGCCCTCGGTCTGCCGGCAGGCATGGATCCGCTCCT
CACCGTCCTCAAGGCCGCCGAACGACCGGATCTGGCAGTTGTCCGCGGAACTCCGCCCGCCGCGATCACCCGGGCGGCGA
TCGACAGTCTGGGGGGTATGAAACGCTTCGTTTCACGGGGCGACGTGGTGGTCGTGAAACCCAATATCGGCTGGGACCGC
ACCCCGGAGTACGCCGCCAATACCAATCCCGAAGTTGTCGGCGCCGTCGTCCGTCTCTGCTTTGAAGCGGGCGCCAAACA
GGTCAAGGTTTTCGACCGGCCCGTCAATGATCCCCGGCGAACTTACAGGCAGAGCGGCATCGCCGCCGCGGCTTCCGCCC
TGGGCGCTTCCGTCTTATTCACAGACAGCCGGAAATTCAAGGATATGCGCATCAACGGCTCTTCGCTGAAATCATGGCCT
CTTTACACGGAGGTCTTCGAGGCGGACAAGGTCATCAACATCCCCATCGCCAAAACTCACGGAACGTCAAAATTAACTCT
GGGCATGAAAAACTGGATGGGAGTGATGGGCGGCTGGCGGGGACGGATTCATCAGCGCATCGATGAAAGCCTCGTAGACC
TGGCGACGTTCATCAAGCCCACGCTGACCATCCTCGATGCTGTCCGGATTCTGACGGATAACGGACCTCAGGGCGGAAAC
CTGGCGGATGTGAGGCGGCTCAACATGGTCATCGCCGGAACGGACGCCGTGGCGGTCGACGCCTTCGGAGCCACCCTCTT
CGGGATGAAACCGGCGGAACTGGGTTTTGTCCGCATCGGCCACCAGCGCCGACTGGGAAGCATGGACCTGGCCGGAATGA
ACATCAGGAGAATTACCCTGTAA

Upstream 100 bases:

>100_bases
CCAGTTGCGGACCGATGAAAGCATCGGGGATAAATCCGGCTTAAACGCCTCCGTAAGATAATGTAAACATGCAAGACCTT
TGTGAGAAGAGGGAAAAGCC

Downstream 100 bases:

>100_bases
GCATGTCGCCACCTGCATGCAGGCGCCCGACTTTCCTGCACGACATCAAAGCCCGATGCTTAAAAATATCCGACGCCTGA
CTCAGGCCATCTTTCTGCTT

Product: cytoplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MNRRDFLKSALITGAALGLPAGMDPLLTVLKAAERPDLAVVRGTPPAAITRAAIDSLGGMKRFVSRGDVVVVKPNIGWDR
TPEYAANTNPEVVGAVVRLCFEAGAKQVKVFDRPVNDPRRTYRQSGIAAAASALGASVLFTDSRKFKDMRINGSSLKSWP
LYTEVFEADKVINIPIAKTHGTSKLTLGMKNWMGVMGGWRGRIHQRIDESLVDLATFIKPTLTILDAVRILTDNGPQGGN
LADVRRLNMVIAGTDAVAVDAFGATLFGMKPAELGFVRIGHQRRLGSMDLAGMNIRRITL

Sequences:

>Translated_300_residues
MNRRDFLKSALITGAALGLPAGMDPLLTVLKAAERPDLAVVRGTPPAAITRAAIDSLGGMKRFVSRGDVVVVKPNIGWDR
TPEYAANTNPEVVGAVVRLCFEAGAKQVKVFDRPVNDPRRTYRQSGIAAAASALGASVLFTDSRKFKDMRINGSSLKSWP
LYTEVFEADKVINIPIAKTHGTSKLTLGMKNWMGVMGGWRGRIHQRIDESLVDLATFIKPTLTILDAVRILTDNGPQGGN
LADVRRLNMVIAGTDAVAVDAFGATLFGMKPAELGFVRIGHQRRLGSMDLAGMNIRRITL
>Mature_300_residues
MNRRDFLKSALITGAALGLPAGMDPLLTVLKAAERPDLAVVRGTPPAAITRAAIDSLGGMKRFVSRGDVVVVKPNIGWDR
TPEYAANTNPEVVGAVVRLCFEAGAKQVKVFDRPVNDPRRTYRQSGIAAAASALGASVLFTDSRKFKDMRINGSSLKSWP
LYTEVFEADKVINIPIAKTHGTSKLTLGMKNWMGVMGGWRGRIHQRIDESLVDLATFIKPTLTILDAVRILTDNGPQGGN
LADVRRLNMVIAGTDAVAVDAFGATLFGMKPAELGFVRIGHQRRLGSMDLAGMNIRRITL

Specific function: Unknown

COG id: COG2006

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cellular thylakoid membrane; Peripheral membrane protein; Cytoplasmic side (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007160 [H]

Pfam domain/function: PF04015 DUF362 [H]

EC number: NA

Molecular weight: Translated: 32406; Mature: 32406

Theoretical pI: Translated: 10.94; Mature: 10.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRRDFLKSALITGAALGLPAGMDPLLTVLKAAERPDLAVVRGTPPAAITRAAIDSLGGM
CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHH
KRFVSRGDVVVVKPNIGWDRTPEYAANTNPEVVGAVVRLCFEAGAKQVKVFDRPVNDPRR
HHHHCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHH
TYRQSGIAAAASALGASVLFTDSRKFKDMRINGSSLKSWPLYTEVFEADKVINIPIAKTH
HHHHHHHHHHHHHHCCEEEEECCCCCEEEEECCCCCCCCCCHHHHHCCCCEEECEEECCC
GTSKLTLGMKNWMGVMGGWRGRIHQRIDESLVDLATFIKPTLTILDAVRILTDNGPQGGN
CCCEEEECHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
LADVRRLNMVIAGTDAVAVDAFGATLFGMKPAELGFVRIGHQRRLGSMDLAGMNIRRITL
HHHHHHEEEEEECCCEEEEHHHCHHHHCCCCCCCCEEEECCHHCCCCCCCCCCCEEEEEC
>Mature Secondary Structure
MNRRDFLKSALITGAALGLPAGMDPLLTVLKAAERPDLAVVRGTPPAAITRAAIDSLGGM
CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHH
KRFVSRGDVVVVKPNIGWDRTPEYAANTNPEVVGAVVRLCFEAGAKQVKVFDRPVNDPRR
HHHHCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHH
TYRQSGIAAAASALGASVLFTDSRKFKDMRINGSSLKSWPLYTEVFEADKVINIPIAKTH
HHHHHHHHHHHHHHCCEEEEECCCCCEEEEECCCCCCCCCCHHHHHCCCCEEECEEECCC
GTSKLTLGMKNWMGVMGGWRGRIHQRIDESLVDLATFIKPTLTILDAVRILTDNGPQGGN
CCCEEEECHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
LADVRRLNMVIAGTDAVAVDAFGATLFGMKPAELGFVRIGHQRRLGSMDLAGMNIRRITL
HHHHHHEEEEEECCCEEEEHHHCHHHHCCCCCCCCEEEECCHHCCCCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]