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The map label for this gene is 85860932

Identifier: 85860932

GI number: 85860932

Start: 3101205

End: 3101840

Strand: Direct

Name: 85860932

Synonym: SYN_03842

Alternate gene names: NA

Gene position: 3101205-3101840 (Clockwise)

Preceding gene: 85860921

Following gene: 85860933

Centisome position: 97.54

GC content: 55.5

Gene sequence:

>636_bases
ATGCAGAAAGATAAAATAAAAACCGATTGGTCTCACGGTGAAAACCCGGAGGATTACAAATGCTGTGTAGCCTTCCACGG
CCACGATTGCCCCGGTCTGGCCGTTGGTTACCGGGCTGCACAGGCGGCCCTGGCGGCACTTTGCGGGGAGCGTGCCGAAG
ATGAGGAACTGGTGGCCATCGTAGAGACAGACGCATGCGGCGTCGATGCCCTCCAGGTCCTGACTGGCTGTACTTTCGGC
AAGGGAAACCTCATCTATCAGGACCATGGCAAACACGTCTTCACTCTTATCGAACGAAAATCAGGACGTGGGGTGCGCGT
TGCCCTCAAAGCCGGGGTTATGGAGATGAACGAGCGTCACTTGACGCTCATGGAAAAGGTGCATCAGATGACCGCAACTC
CGCATGAGACCGCTGAATTTTGGAAGATCCACAGTCAAAAGGCTCTTGAGATTCTGCAAAAACCCATTGAAACCCTTTTT
AATATTCAACCTATCAACCGGACGCTCCCTCCCAAGGCTCGGAGGGAGCCCTCCCGTCTCTGCGCCCGTTGCGGCGAACC
TGCCATGGGCTCGAAACTGGTCGTTCTCGATGGACGAGAGGTCTGCCGCGACTGCCTCCAACCGGAAGAAAGGTGA

Upstream 100 bases:

>100_bases
GGTGTTACCTTATTCTAAAAAATATTATCAAGAATTTTGATGTTGCTCCAAGGACGAATTTTCCCAAATTATTACATCAC
TGCAGCGTTGAAGGTACATT

Downstream 100 bases:

>100_bases
CTTTGCCATGGCCGTCGCAGTCACCAGTCCGCCAACGCTTGCCTATCGAACGGCAGTCCGGGGGAAAATTCTCATACTCT
TCTCTTGCTTTGCTCTGCTC

Product: cytoplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MQKDKIKTDWSHGENPEDYKCCVAFHGHDCPGLAVGYRAAQAALAALCGERAEDEELVAIVETDACGVDALQVLTGCTFG
KGNLIYQDHGKHVFTLIERKSGRGVRVALKAGVMEMNERHLTLMEKVHQMTATPHETAEFWKIHSQKALEILQKPIETLF
NIQPINRTLPPKARREPSRLCARCGEPAMGSKLVVLDGREVCRDCLQPEER

Sequences:

>Translated_211_residues
MQKDKIKTDWSHGENPEDYKCCVAFHGHDCPGLAVGYRAAQAALAALCGERAEDEELVAIVETDACGVDALQVLTGCTFG
KGNLIYQDHGKHVFTLIERKSGRGVRVALKAGVMEMNERHLTLMEKVHQMTATPHETAEFWKIHSQKALEILQKPIETLF
NIQPINRTLPPKARREPSRLCARCGEPAMGSKLVVLDGREVCRDCLQPEER
>Mature_211_residues
MQKDKIKTDWSHGENPEDYKCCVAFHGHDCPGLAVGYRAAQAALAALCGERAEDEELVAIVETDACGVDALQVLTGCTFG
KGNLIYQDHGKHVFTLIERKSGRGVRVALKAGVMEMNERHLTLMEKVHQMTATPHETAEFWKIHSQKALEILQKPIETLF
NIQPINRTLPPKARREPSRLCARCGEPAMGSKLVVLDGREVCRDCLQPEER

Specific function: Unknown

COG id: COG2191

COG function: function code C; Formylmethanofuran dehydrogenase subunit E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0066 (virR) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003814
- InterPro:   IPR018316
- InterPro:   IPR001378 [H]

Pfam domain/function: PF02663 FwdE; PF01980 UPF0066 [H]

EC number: NA

Molecular weight: Translated: 23516; Mature: 23516

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
4.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKDKIKTDWSHGENPEDYKCCVAFHGHDCPGLAVGYRAAQAALAALCGERAEDEELVAI
CCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEE
VETDACGVDALQVLTGCTFGKGNLIYQDHGKHVFTLIERKSGRGVRVALKAGVMEMNERH
EECCCCCHHHHHHHHCCCCCCCCEEEECCCCEEEEEEECCCCCCEEEEEECCHHHHCHHH
LTLMEKVHQMTATPHETAEFWKIHSQKALEILQKPIETLFNIQPINRTLPPKARREPSRL
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHH
CARCGEPAMGSKLVVLDGREVCRDCLQPEER
HHHCCCCCCCCEEEEECCHHHHHHHCCCCCC
>Mature Secondary Structure
MQKDKIKTDWSHGENPEDYKCCVAFHGHDCPGLAVGYRAAQAALAALCGERAEDEELVAI
CCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEE
VETDACGVDALQVLTGCTFGKGNLIYQDHGKHVFTLIERKSGRGVRVALKAGVMEMNERH
EECCCCCHHHHHHHHCCCCCCCCEEEECCCCEEEEEEECCCCCCEEEEEECCHHHHCHHH
LTLMEKVHQMTATPHETAEFWKIHSQKALEILQKPIETLFNIQPINRTLPPKARREPSRL
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHH
CARCGEPAMGSKLVVLDGREVCRDCLQPEER
HHHCCCCCCCCEEEEECCHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]