Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85860908

Identifier: 85860908

GI number: 85860908

Start: 3079640

End: 3080569

Strand: Direct

Name: 85860908

Synonym: SYN_01616

Alternate gene names: NA

Gene position: 3079640-3080569 (Clockwise)

Preceding gene: 85860905

Following gene: 85860910

Centisome position: 96.87

GC content: 47.2

Gene sequence:

>930_bases
ATGAGAAAAATACTTTTATCATTATTTATAGCCACATTGCTGGCACTTTCTACCCAAGGTTGCTTCCTCGGTGTTGAACC
TGGTTCCTACGAATATACCGGGGACACCGGCCAGGAACCGCCACCCATCTTATTTGAGGCGCCGCCGGACGTGATCGTCA
TGCCTGACACCCGGGATGTTTACGTAGTCCCTGATATCTATATCGACTTGTATTTCTGGAATGGATGGTGGTGGCGTTCA
TGGGAAGGTCGATGGTATCGATCATTCTATTATGACCGGGGCTGGATTTATTATAGAAGCATACCCGGGTTCTATTTCGA
CGTGAACCCAGGCTGGAGGATTTATTATAAAAACCGCAACTGGCAGGGACATCGGTGGCTCTATGAAAAGATATCTAATC
AGCGGCTTCAGCAGAACTGGAAGAGCTGGCAGAACAATCGTTACTGGGAAAGAGAAAAAACCTGGGGCGTCGAAAACTAT
CAGCCTCAGATAGAACAGCAGAGGCAGAAAATACGGCTACAGCTACAGCAGGACACCCAAAAACAGCAAAACAGGCAGGA
GCAAAACAGGCAGAACAGACCACAAACTCAACGGCAGATACAGCTACAGCAGGACACCCAAAAACAGCAAAACAGGCAGG
AGCAAAACAGGCAGAACAGACCACAAACTCAACGGCAGATACAGCTACAGCAGGACACCCAAAAACAGCAAAACAGGCAG
GAGCAAAACAGGCAGAACAGACCACAAACTCAACGGCAGATACAGCTACAGCAGGACACCCAAAAACAGCAAAACAGGCA
GGAGCAAAACAGGCAGAACAGACCACAAACTCAACGGCAGATACAGCTACAGCAGGACACCCAAAAACAGCAAAACAGGC
AGGAGCAAAACAAAATATTTCTAACAATCCCAAGAAATACAGAAATATGA

Upstream 100 bases:

>100_bases
ATCATGAAGGTGATGAATCTGCCTGCCCTTGCAGATGCGGATCAGGTATTAACAAAAAAGATGTTCCACGTGAAACACGT
TAGATAAAAAGAGGATCGTC

Downstream 100 bases:

>100_bases
TTAACAGAACAGAGTCAACACCCTGAACCGGAACAATACGGAATCATAAATCAGCGACGTAATTTACCAGTTGCCTGCGC
TGACCTGAAATGTAACGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MRKILLSLFIATLLALSTQGCFLGVEPGSYEYTGDTGQEPPPILFEAPPDVIVMPDTRDVYVVPDIYIDLYFWNGWWWRS
WEGRWYRSFYYDRGWIYYRSIPGFYFDVNPGWRIYYKNRNWQGHRWLYEKISNQRLQQNWKSWQNNRYWEREKTWGVENY
QPQIEQQRQKIRLQLQQDTQKQQNRQEQNRQNRPQTQRQIQLQQDTQKQQNRQEQNRQNRPQTQRQIQLQQDTQKQQNRQ
EQNRQNRPQTQRQIQLQQDTQKQQNRQEQNRQNRPQTQRQIQLQQDTQKQQNRQEQNKIFLTIPRNTEI

Sequences:

>Translated_309_residues
MRKILLSLFIATLLALSTQGCFLGVEPGSYEYTGDTGQEPPPILFEAPPDVIVMPDTRDVYVVPDIYIDLYFWNGWWWRS
WEGRWYRSFYYDRGWIYYRSIPGFYFDVNPGWRIYYKNRNWQGHRWLYEKISNQRLQQNWKSWQNNRYWEREKTWGVENY
QPQIEQQRQKIRLQLQQDTQKQQNRQEQNRQNRPQTQRQIQLQQDTQKQQNRQEQNRQNRPQTQRQIQLQQDTQKQQNRQ
EQNRQNRPQTQRQIQLQQDTQKQQNRQEQNRQNRPQTQRQIQLQQDTQKQQNRQEQNKIFLTIPRNTEI
>Mature_309_residues
MRKILLSLFIATLLALSTQGCFLGVEPGSYEYTGDTGQEPPPILFEAPPDVIVMPDTRDVYVVPDIYIDLYFWNGWWWRS
WEGRWYRSFYYDRGWIYYRSIPGFYFDVNPGWRIYYKNRNWQGHRWLYEKISNQRLQQNWKSWQNNRYWEREKTWGVENY
QPQIEQQRQKIRLQLQQDTQKQQNRQEQNRQNRPQTQRQIQLQQDTQKQQNRQEQNRQNRPQTQRQIQLQQDTQKQQNRQ
EQNRQNRPQTQRQIQLQQDTQKQQNRQEQNRQNRPQTQRQIQLQQDTQKQQNRQEQNKIFLTIPRNTEI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38469; Mature: 38469

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKILLSLFIATLLALSTQGCFLGVEPGSYEYTGDTGQEPPPILFEAPPDVIVMPDTRDV
CHHHHHHHHHHHHHHHCCCCCEEECCCCCEEECCCCCCCCCCEEEECCCCEEEECCCCCE
YVVPDIYIDLYFWNGWWWRSWEGRWYRSFYYDRGWIYYRSIPGFYFDVNPGWRIYYKNRN
EECCEEEEEEEEECCEEEECCCCCEEEEEEECCCEEEEEECCCEEEECCCCEEEEEECCC
WQGHRWLYEKISNQRLQQNWKSWQNNRYWEREKTWGVENYQPQIEQQRQKIRLQLQQDTQ
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
KQQNRQEQNRQNRPQTQRQIQLQQDTQKQQNRQEQNRQNRPQTQRQIQLQQDTQKQQNRQ
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
EQNRQNRPQTQRQIQLQQDTQKQQNRQEQNRQNRPQTQRQIQLQQDTQKQQNRQEQNKIF
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEE
LTIPRNTEI
EEECCCCCC
>Mature Secondary Structure
MRKILLSLFIATLLALSTQGCFLGVEPGSYEYTGDTGQEPPPILFEAPPDVIVMPDTRDV
CHHHHHHHHHHHHHHHCCCCCEEECCCCCEEECCCCCCCCCCEEEECCCCEEEECCCCCE
YVVPDIYIDLYFWNGWWWRSWEGRWYRSFYYDRGWIYYRSIPGFYFDVNPGWRIYYKNRN
EECCEEEEEEEEECCEEEECCCCCEEEEEEECCCEEEEEECCCEEEECCCCEEEEEECCC
WQGHRWLYEKISNQRLQQNWKSWQNNRYWEREKTWGVENYQPQIEQQRQKIRLQLQQDTQ
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
KQQNRQEQNRQNRPQTQRQIQLQQDTQKQQNRQEQNRQNRPQTQRQIQLQQDTQKQQNRQ
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
EQNRQNRPQTQRQIQLQQDTQKQQNRQEQNRQNRPQTQRQIQLQQDTQKQQNRQEQNKIF
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEE
LTIPRNTEI
EEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA