Click here to switch to the map view.

The map label for this gene is 85860893

Identifier: 85860893

GI number: 85860893

Start: 3060708

End: 3061838

Strand: Direct

Name: 85860893

Synonym: SYN_01631

Alternate gene names: NA

Gene position: 3060708-3061838 (Clockwise)

Preceding gene: 85860891

Following gene: 85860894

Centisome position: 96.27

GC content: 53.67

Gene sequence:

>1131_bases
ATGTGCCGATTGTTTGCAATAACGAGCAGCGAACCTCTTTCCCCCATGGTCGCCATCCGAGCCCTGGATGTCATGAAAGA
GGGCCATGACGGTTCCGGAGTGGGTCTTTTTCTTGCCGATCTCGGCGGGGAGTTCGAACAGTTTAAAGGGAGGCCCATTC
TTTCAGGAATCTTTTCCAACAGCGGAATCAAGGCGCTGGATCACTACATGATGGAAATGGACTTCCTGGTGAAATACAAG
TTGTCCTTCCGCCCCAAAAAGCAGCGTCCGGCTGGAACGCCGGACCGGGATCACTACATGATCCGCGTCTATGATTATCC
GCCGGAATGGGAGGATCTGGGTGAAGAGGAAATCGGCCGGCGTTTACTGCAGACACGCCTCCGTCTGAGAAAACTGGGGG
AAGAGGACGGGTCCATGCTGGTATTCAGCTTCTGGCCGGATGTGATCATGATCAAAGAGGTGGGAGATCCTCTGGCCGTC
GGTCAGTATCTCGGCTTCGATCAGCCGAACCTGCAGGCCCGGATCATCATGGCGCAGGGAAGACAGAATACCAATTACGC
CATTGACATCTATGCCTGCCATCCCTTTTTCATTGAGGGAATCGCCACGATGACCAATGGCGAGAATACCGCTTTTGTGC
CGATCCGGGAATTTCTTCTTTCCCGGGGCGATCCGGGCTATATCGGATATCGATCGGATTCGGAGGTTTTTACCCATATC
CTCCATTATACGCTGAAGCATCTCGGATTGAGCCTGGAAGCATACAAACACATTCTGACGCCGCTCAAGGATGAGGAGCT
GGCCGGACATCCCGATGGCCGGCTTTTACAGCTGTTGAAACAGAGCTGCCGACCCATGATCGTGGATGGCCCGAACTGTG
TCATGGGATGCCTGCCCGACAAGACGCTTTTTCTGGTGCAGGACAGTAAAAAACTCCGTCCCGGAATCGTCGGCGGACTT
CCGGGGTTATATGCCTTTTCCTCGGAAGTGTGCGGTCTTGATGAGGCCATTCCCGAACGGGATAAAAGTCGGGATTTTCA
GCCCATGGGAACGGATCTGGTTTCTGTCGGACCGGACCGGCGGGAGGTGAAACGATGGAATCAATGGAAAAACTTACCCC
TTCAGCATTAA

Upstream 100 bases:

>100_bases
TGGCTTTTCTCCTTATCACAATGTATCAATTATTGAACATTAACCCTTTTTAATAGGAATGAAAGGCCCAATCTCAAAGG
GCTGAAAGGAAGTTTTCCTC

Downstream 100 bases:

>100_bases
ATACAAAAGACCTTCCCTGGCTGATTCTCTGGGATAAGGAAAAATGCGCCTTATGCGGCCGGTGTACGGCCGTATGTCCG
GTTCAGGCCATCGAGCCCGC

Product: glutamate synthase (NADPH)

Products: NA

Alternate protein names: Glutamate Synthase Large Subunit; Glutamate Synthase Gltb1 Subunit; Glutamine Amidotransferase

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MCRLFAITSSEPLSPMVAIRALDVMKEGHDGSGVGLFLADLGGEFEQFKGRPILSGIFSNSGIKALDHYMMEMDFLVKYK
LSFRPKKQRPAGTPDRDHYMIRVYDYPPEWEDLGEEEIGRRLLQTRLRLRKLGEEDGSMLVFSFWPDVIMIKEVGDPLAV
GQYLGFDQPNLQARIIMAQGRQNTNYAIDIYACHPFFIEGIATMTNGENTAFVPIREFLLSRGDPGYIGYRSDSEVFTHI
LHYTLKHLGLSLEAYKHILTPLKDEELAGHPDGRLLQLLKQSCRPMIVDGPNCVMGCLPDKTLFLVQDSKKLRPGIVGGL
PGLYAFSSEVCGLDEAIPERDKSRDFQPMGTDLVSVGPDRREVKRWNQWKNLPLQH

Sequences:

>Translated_376_residues
MCRLFAITSSEPLSPMVAIRALDVMKEGHDGSGVGLFLADLGGEFEQFKGRPILSGIFSNSGIKALDHYMMEMDFLVKYK
LSFRPKKQRPAGTPDRDHYMIRVYDYPPEWEDLGEEEIGRRLLQTRLRLRKLGEEDGSMLVFSFWPDVIMIKEVGDPLAV
GQYLGFDQPNLQARIIMAQGRQNTNYAIDIYACHPFFIEGIATMTNGENTAFVPIREFLLSRGDPGYIGYRSDSEVFTHI
LHYTLKHLGLSLEAYKHILTPLKDEELAGHPDGRLLQLLKQSCRPMIVDGPNCVMGCLPDKTLFLVQDSKKLRPGIVGGL
PGLYAFSSEVCGLDEAIPERDKSRDFQPMGTDLVSVGPDRREVKRWNQWKNLPLQH
>Mature_376_residues
MCRLFAITSSEPLSPMVAIRALDVMKEGHDGSGVGLFLADLGGEFEQFKGRPILSGIFSNSGIKALDHYMMEMDFLVKYK
LSFRPKKQRPAGTPDRDHYMIRVYDYPPEWEDLGEEEIGRRLLQTRLRLRKLGEEDGSMLVFSFWPDVIMIKEVGDPLAV
GQYLGFDQPNLQARIIMAQGRQNTNYAIDIYACHPFFIEGIATMTNGENTAFVPIREFLLSRGDPGYIGYRSDSEVFTHI
LHYTLKHLGLSLEAYKHILTPLKDEELAGHPDGRLLQLLKQSCRPMIVDGPNCVMGCLPDKTLFLVQDSKKLRPGIVGGL
PGLYAFSSEVCGLDEAIPERDKSRDFQPMGTDLVSVGPDRREVKRWNQWKNLPLQH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42553; Mature: 42553

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCRLFAITSSEPLSPMVAIRALDVMKEGHDGSGVGLFLADLGGEFEQFKGRPILSGIFSN
CEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHCCCHHHHHHHCC
SGIKALDHYMMEMDFLVKYKLSFRPKKQRPAGTPDRDHYMIRVYDYPPEWEDLGEEEIGR
CCHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCHHHCCHHHHHH
RLLQTRLRLRKLGEEDGSMLVFSFWPDVIMIKEVGDPLAVGQYLGFDQPNLQARIIMAQG
HHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEECCCCHHHHHHCCCCCCCCEEEEEEECC
RQNTNYAIDIYACHPFFIEGIATMTNGENTAFVPIREFLLSRGDPGYIGYRSDSEVFTHI
CCCCCEEEEEEEECHHHHHHHHHEECCCCEEEHHHHHHHHCCCCCCEEEECCCHHHHHHH
LHYTLKHLGLSLEAYKHILTPLKDEELAGHPDGRLLQLLKQSCRPMIVDGPNCVMGCLPD
HHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCEEEECCCC
KTLFLVQDSKKLRPGIVGGLPGLYAFSSEVCGLDEAIPERDKSRDFQPMGTDLVSVGPDR
CEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCEECCCCH
REVKRWNQWKNLPLQH
HHHHHHHHHCCCCCCC
>Mature Secondary Structure
MCRLFAITSSEPLSPMVAIRALDVMKEGHDGSGVGLFLADLGGEFEQFKGRPILSGIFSN
CEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHCCCHHHHHHHCC
SGIKALDHYMMEMDFLVKYKLSFRPKKQRPAGTPDRDHYMIRVYDYPPEWEDLGEEEIGR
CCHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCHHHCCHHHHHH
RLLQTRLRLRKLGEEDGSMLVFSFWPDVIMIKEVGDPLAVGQYLGFDQPNLQARIIMAQG
HHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEECCCCHHHHHHCCCCCCCCEEEEEEECC
RQNTNYAIDIYACHPFFIEGIATMTNGENTAFVPIREFLLSRGDPGYIGYRSDSEVFTHI
CCCCCEEEEEEEECHHHHHHHHHEECCCCEEEHHHHHHHHCCCCCCEEEECCCHHHHHHH
LHYTLKHLGLSLEAYKHILTPLKDEELAGHPDGRLLQLLKQSCRPMIVDGPNCVMGCLPD
HHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCEEEECCCC
KTLFLVQDSKKLRPGIVGGLPGLYAFSSEVCGLDEAIPERDKSRDFQPMGTDLVSVGPDR
CEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCEECCCCH
REVKRWNQWKNLPLQH
HHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA