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The map label for this gene is 85860868

Identifier: 85860868

GI number: 85860868

Start: 3028846

End: 3029397

Strand: Direct

Name: 85860868

Synonym: SYN_01658

Alternate gene names: NA

Gene position: 3028846-3029397 (Clockwise)

Preceding gene: 85860867

Following gene: 85860870

Centisome position: 95.27

GC content: 49.46

Gene sequence:

>552_bases
ATGATTGCTTCAATACGATGCTCCCGAATCGAAGGGGAGGTTAAACAAAAATATGAATATCTTGGCTATGATACCTGCGC
TGGTGCGAGCTTGGCTTTTGGAGGCCCTCAAGAGTGTGCCTATGCCTGCATTGGTTTAGGAGACTGTGCTACGTCATGCC
CGTTTGGCGCCATCATCCTGCAAAATTCATTTCCGGTTGTAGATCCTGCCAAGTGTGTTGGTTGCGGATCATGTGTGCGT
GCCTGCCCCAAAAAAGTGATCGAACTTATTCCCTTGAAGGCTCGAGTCTGGGTGCCGTGCAGCACTCAGGATCCTGGAAA
GACCGTAAGGGCTCTTTGCAAGGTCGGCTGTATAACTTGCAAGATGTGCGTCAAGGCCTGTCCGGCTGGAGCGGTCAGTG
TAGATGGAAACCTTGTGCACATTGATCATGAAAAATGTCTGGCCTATGGACCTGACTGTAAGGAAGCCTGTGTTGAAAAG
TGTCCCCGAAATATTTTCAGACCTTTTATTGCGGAACTGAAAAGAGTTGAGCCGGCAAAGAACGCGGCTTGA

Upstream 100 bases:

>100_bases
TGATCCGGATGTTCCTACGAATCTCTGCTTTCCCGGCAAGGCCGCAGTCGCGGAAGCGGTTGCAGAAATCACAGGGAAAA
AAGTCGCAGGCGCAGAAAAT

Downstream 100 bases:

>100_bases
AACAGGTGTACCGATTCCATTGCATACATAACAGTATGAAGCTTTTTAATTCATTCCATTCGAATTAGCGAACATCATTA
ATTTAACAACAATGCTCTGT

Product: ferredoxin

Products: NA

Alternate protein names: Ferredoxin; Electron Transport Complex Protein; RnfABCDGE Type Electron Transport Complex Subunit B; Electron Transport Complex Protein RnfB; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Fe-S Cluster Domain Protein; Electron Transport Complex Rnfabcdge Type B Subunit; Fe-S Cluster Domain-Containing Protein; Electron Transport Complex; FAD-Dependent Oxidoreductase; Electron Transport Complex RnfABCDGE Type Subunit B; Electron Transport Complex RnfABCdge Type B Subunit; Polyferredoxin; Electron Transport Complex RnfB; NADPH-Dependent Glutamate Synthase; Dihydropyrimidine Dehydrogenase

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MIASIRCSRIEGEVKQKYEYLGYDTCAGASLAFGGPQECAYACIGLGDCATSCPFGAIILQNSFPVVDPAKCVGCGSCVR
ACPKKVIELIPLKARVWVPCSTQDPGKTVRALCKVGCITCKMCVKACPAGAVSVDGNLVHIDHEKCLAYGPDCKEACVEK
CPRNIFRPFIAELKRVEPAKNAA

Sequences:

>Translated_183_residues
MIASIRCSRIEGEVKQKYEYLGYDTCAGASLAFGGPQECAYACIGLGDCATSCPFGAIILQNSFPVVDPAKCVGCGSCVR
ACPKKVIELIPLKARVWVPCSTQDPGKTVRALCKVGCITCKMCVKACPAGAVSVDGNLVHIDHEKCLAYGPDCKEACVEK
CPRNIFRPFIAELKRVEPAKNAA
>Mature_183_residues
MIASIRCSRIEGEVKQKYEYLGYDTCAGASLAFGGPQECAYACIGLGDCATSCPFGAIILQNSFPVVDPAKCVGCGSCVR
ACPKKVIELIPLKARVWVPCSTQDPGKTVRALCKVGCITCKMCVKACPAGAVSVDGNLVHIDHEKCLAYGPDCKEACVEK
CPRNIFRPFIAELKRVEPAKNAA

Specific function: Unknown

COG id: COG2878

COG function: function code C; Predicted NADH:ubiquinone oxidoreductase, subunit RnfB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19482; Mature: 19482

Theoretical pI: Translated: 8.10; Mature: 8.10

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

10.9 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
12.0 %Cys+Met (Translated Protein)
10.9 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
12.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIASIRCSRIEGEVKQKYEYLGYDTCAGASLAFGGPQECAYACIGLGDCATSCPFGAIIL
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHCCCCCCEEEE
QNSFPVVDPAKCVGCGSCVRACPKKVIELIPLKARVWVPCSTQDPGKTVRALCKVGCITC
ECCCCCCCCHHHHCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHH
KMCVKACPAGAVSVDGNLVHIDHEKCLAYGPDCKEACVEKCPRNIFRPFIAELKRVEPAK
HHHHHHCCCCCEEECCCEEEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
NAA
CCC
>Mature Secondary Structure
MIASIRCSRIEGEVKQKYEYLGYDTCAGASLAFGGPQECAYACIGLGDCATSCPFGAIIL
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHCCCCCCEEEE
QNSFPVVDPAKCVGCGSCVRACPKKVIELIPLKARVWVPCSTQDPGKTVRALCKVGCITC
ECCCCCCCCHHHHCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHH
KMCVKACPAGAVSVDGNLVHIDHEKCLAYGPDCKEACVEKCPRNIFRPFIAELKRVEPAK
HHHHHHCCCCCEEECCCEEEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
NAA
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA