Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

Click here to switch to the map view.

The map label for this gene is 85860577

Identifier: 85860577

GI number: 85860577

Start: 2749495

End: 2749899

Strand: Direct

Name: 85860577

Synonym: SYN_02465

Alternate gene names: NA

Gene position: 2749495-2749899 (Clockwise)

Preceding gene: 85860576

Following gene: 85860581

Centisome position: 86.48

GC content: 62.47

Gene sequence:

>405_bases
TTGCCCATTGTTTCAATCCACGCCCCCGCATGGGGGGCGACGAGAGGGCGGCTATCGTGCGCCAGGTGGCATTGTAGTTT
CAATCCACGCCCCCGCATGGGGGGCGACGCCCCTGTTCCCGGTCGGTCAGGGGAAGCAGAAGGGTTTCAATCCACGCCCC
CGCATGGGGGGCGACGTCCTGTGCCTCCTTTGGCCCGGTCTGAAGGGGATAGTTTCAATCCACGCCCCCGCATGGGGGGC
GACATGGCGATCCGTTCCGATCCTTCCGTTTTAAGCTGTTTCAATCCACGCCCCCGCATGGGGGGCGACGAATATCTGGG
ATACAGCAACCTACTGTCTGGAGTTTCAATCCACGCCCCCGCATGGGGGGCGACTCTATCGGGACACCGGCAAGATGAGC
GTTGA

Upstream 100 bases:

>100_bases
GGCGACTATTGATTCCTCTCATCGTCTCCTGAGGTAGGCAGGGGTTTCAATCCACGCCCCCGCATGGGGGGCGACATGGG
TTAAGGGTTACTGAGTTATA

Downstream 100 bases:

>100_bases
CGGTTTCAATCCACGCCCCCGCATGGGGGGCGACTTGGCGTCCATCGCCTGTTTTAGCCGCAGCGCAACGTTTCAATCCA
CGCCCCCGCATGGGGGGCGA

Product: cytoplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 133

Protein sequence:

>134_residues
MPIVSIHAPAWGATRGRLSCARWHCSFNPRPRMGGDAPVPGRSGEAEGFQSTPPHGGRRPVPPLARSEGDSFNPRPRMGG
DMAIRSDPSVLSCFNPRPRMGGDEYLGYSNLLSGVSIHAPAWGATLSGHRQDER

Sequences:

>Translated_134_residues
MPIVSIHAPAWGATRGRLSCARWHCSFNPRPRMGGDAPVPGRSGEAEGFQSTPPHGGRRPVPPLARSEGDSFNPRPRMGG
DMAIRSDPSVLSCFNPRPRMGGDEYLGYSNLLSGVSIHAPAWGATLSGHRQDER
>Mature_133_residues
PIVSIHAPAWGATRGRLSCARWHCSFNPRPRMGGDAPVPGRSGEAEGFQSTPPHGGRRPVPPLARSEGDSFNPRPRMGGD
MAIRSDPSVLSCFNPRPRMGGDEYLGYSNLLSGVSIHAPAWGATLSGHRQDER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14413; Mature: 14282

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIVSIHAPAWGATRGRLSCARWHCSFNPRPRMGGDAPVPGRSGEAEGFQSTPPHGGRRP
CCEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
VPPLARSEGDSFNPRPRMGGDMAIRSDPSVLSCFNPRPRMGGDEYLGYSNLLSGVSIHAP
CCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEECCCCCCCCCCCCCCHHHHHCCCEEECC
AWGATLSGHRQDER
CCCCCCCCCCCCCC
>Mature Secondary Structure 
PIVSIHAPAWGATRGRLSCARWHCSFNPRPRMGGDAPVPGRSGEAEGFQSTPPHGGRRP
CEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
VPPLARSEGDSFNPRPRMGGDMAIRSDPSVLSCFNPRPRMGGDEYLGYSNLLSGVSIHAP
CCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEECCCCCCCCCCCCCCHHHHHCCCEEECC
AWGATLSGHRQDER
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA