| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85860577
Identifier: 85860577
GI number: 85860577
Start: 2749495
End: 2749899
Strand: Direct
Name: 85860577
Synonym: SYN_02465
Alternate gene names: NA
Gene position: 2749495-2749899 (Clockwise)
Preceding gene: 85860576
Following gene: 85860581
Centisome position: 86.48
GC content: 62.47
Gene sequence:
>405_bases TTGCCCATTGTTTCAATCCACGCCCCCGCATGGGGGGCGACGAGAGGGCGGCTATCGTGCGCCAGGTGGCATTGTAGTTT CAATCCACGCCCCCGCATGGGGGGCGACGCCCCTGTTCCCGGTCGGTCAGGGGAAGCAGAAGGGTTTCAATCCACGCCCC CGCATGGGGGGCGACGTCCTGTGCCTCCTTTGGCCCGGTCTGAAGGGGATAGTTTCAATCCACGCCCCCGCATGGGGGGC GACATGGCGATCCGTTCCGATCCTTCCGTTTTAAGCTGTTTCAATCCACGCCCCCGCATGGGGGGCGACGAATATCTGGG ATACAGCAACCTACTGTCTGGAGTTTCAATCCACGCCCCCGCATGGGGGGCGACTCTATCGGGACACCGGCAAGATGAGC GTTGA
Upstream 100 bases:
>100_bases GGCGACTATTGATTCCTCTCATCGTCTCCTGAGGTAGGCAGGGGTTTCAATCCACGCCCCCGCATGGGGGGCGACATGGG TTAAGGGTTACTGAGTTATA
Downstream 100 bases:
>100_bases CGGTTTCAATCCACGCCCCCGCATGGGGGGCGACTTGGCGTCCATCGCCTGTTTTAGCCGCAGCGCAACGTTTCAATCCA CGCCCCCGCATGGGGGGCGA
Product: cytoplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 134; Mature: 133
Protein sequence:
>134_residues MPIVSIHAPAWGATRGRLSCARWHCSFNPRPRMGGDAPVPGRSGEAEGFQSTPPHGGRRPVPPLARSEGDSFNPRPRMGG DMAIRSDPSVLSCFNPRPRMGGDEYLGYSNLLSGVSIHAPAWGATLSGHRQDER
Sequences:
>Translated_134_residues MPIVSIHAPAWGATRGRLSCARWHCSFNPRPRMGGDAPVPGRSGEAEGFQSTPPHGGRRPVPPLARSEGDSFNPRPRMGG DMAIRSDPSVLSCFNPRPRMGGDEYLGYSNLLSGVSIHAPAWGATLSGHRQDER >Mature_133_residues PIVSIHAPAWGATRGRLSCARWHCSFNPRPRMGGDAPVPGRSGEAEGFQSTPPHGGRRPVPPLARSEGDSFNPRPRMGGD MAIRSDPSVLSCFNPRPRMGGDEYLGYSNLLSGVSIHAPAWGATLSGHRQDER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14413; Mature: 14282
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIVSIHAPAWGATRGRLSCARWHCSFNPRPRMGGDAPVPGRSGEAEGFQSTPPHGGRRP CCEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VPPLARSEGDSFNPRPRMGGDMAIRSDPSVLSCFNPRPRMGGDEYLGYSNLLSGVSIHAP CCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEECCCCCCCCCCCCCCHHHHHCCCEEECC AWGATLSGHRQDER CCCCCCCCCCCCCC >Mature Secondary Structure PIVSIHAPAWGATRGRLSCARWHCSFNPRPRMGGDAPVPGRSGEAEGFQSTPPHGGRRP CEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VPPLARSEGDSFNPRPRMGGDMAIRSDPSVLSCFNPRPRMGGDEYLGYSNLLSGVSIHAP CCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEECCCCCCCCCCCCCCHHHHHCCCEEECC AWGATLSGHRQDER CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA