Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85860576

Identifier: 85860576

GI number: 85860576

Start: 2748995

End: 2749426

Strand: Direct

Name: 85860576

Synonym: SYN_02464

Alternate gene names: NA

Gene position: 2748995-2749426 (Clockwise)

Preceding gene: 85860575

Following gene: 85860577

Centisome position: 86.47

GC content: 58.8

Gene sequence:

>432_bases
ATGGGGGGCGACTGGCCAGGGAATCATTTTTCCGCATTGTTGTCCAGTTTCAATCCACGCCCCCGCATGGGGGGCGACGA
TGACAGCGCGGAAGAAATCGCAACCGTATTAGTTTCAATCCACGCCCCCGCATGGGGGGCGACGCGAATATCAGGGCATG
TGCGCGGACTGCATCGAAGTTTCAATCCACGCCCCCGCATGGGGGGCGACATTGAACCGGCTTGCAACCAGACGGGGAGC
AAAGTTTCAATCCACGCCCCCGCATGGGGGGCGACTTTATCGTCGTTATTCCCGCGCCGTTGCGTTCTGGTTTCAATCCA
CGCCCCCGCATGGGGGGCGACTATTCGTAACCGCAGGGTTGATGACATGATTCAGTTTCAATCCACGCCCCCGCATGGGG
GGCGACTATTGATTCCTCTCATCGTCTCCTGA

Upstream 100 bases:

>100_bases
GCCTATGCAATTCGGTTTCAATCCACGCCCCCGCATGGGGGGCGACCCTATCCCTATATCCTGAACGGTTATCATTTCCG
GTTTCAATCCACGCCCCCGC

Downstream 100 bases:

>100_bases
GGTAGGCAGGGGTTTCAATCCACGCCCCCGCATGGGGGGCGACATGGGTTAAGGGTTACTGAGTTATATTGCCCATTGTT
TCAATCCACGCCCCCGCATG

Product: cytoplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MGGDWPGNHFSALLSSFNPRPRMGGDDDSAEEIATVLVSIHAPAWGATRISGHVRGLHRSFNPRPRMGGDIEPACNQTGS
KVSIHAPAWGATLSSLFPRRCVLVSIHAPAWGATIRNRRVDDMIQFQSTPPHGGRLLIPLIVS

Sequences:

>Translated_143_residues
MGGDWPGNHFSALLSSFNPRPRMGGDDDSAEEIATVLVSIHAPAWGATRISGHVRGLHRSFNPRPRMGGDIEPACNQTGS
KVSIHAPAWGATLSSLFPRRCVLVSIHAPAWGATIRNRRVDDMIQFQSTPPHGGRLLIPLIVS
>Mature_142_residues
GGDWPGNHFSALLSSFNPRPRMGGDDDSAEEIATVLVSIHAPAWGATRISGHVRGLHRSFNPRPRMGGDIEPACNQTGSK
VSIHAPAWGATLSSLFPRRCVLVSIHAPAWGATIRNRRVDDMIQFQSTPPHGGRLLIPLIVS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15421; Mature: 15290

Theoretical pI: Translated: 11.00; Mature: 11.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGDWPGNHFSALLSSFNPRPRMGGDDDSAEEIATVLVSIHAPAWGATRISGHVRGLHRS
CCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHC
FNPRPRMGGDIEPACNQTGSKVSIHAPAWGATLSSLFPRRCVLVSIHAPAWGATIRNRRV
CCCCCCCCCCCCHHHCCCCCEEEEECCCHHHHHHHHCCCEEEEEEEECCCCCCHHHCCCH
DDMIQFQSTPPHGGRLLIPLIVS
HHHHHCCCCCCCCCEEEEEEECC
>Mature Secondary Structure 
GGDWPGNHFSALLSSFNPRPRMGGDDDSAEEIATVLVSIHAPAWGATRISGHVRGLHRS
CCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHC
FNPRPRMGGDIEPACNQTGSKVSIHAPAWGATLSSLFPRRCVLVSIHAPAWGATIRNRRV
CCCCCCCCCCCCHHHCCCCCEEEEECCCHHHHHHHHCCCEEEEEEEECCCCCCHHHCCCH
DDMIQFQSTPPHGGRLLIPLIVS
HHHHHCCCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA