Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

Click here to switch to the map view.

The map label for this gene is 85860414

Identifier: 85860414

GI number: 85860414

Start: 2581174

End: 2581341

Strand: Direct

Name: 85860414

Synonym: SYN_00089

Alternate gene names: NA

Gene position: 2581174-2581341 (Clockwise)

Preceding gene: 85860413

Following gene: 85860415

Centisome position: 81.19

GC content: 47.62

Gene sequence:

>168_bases
TTGACAAGCTCCGCTTTTTATTTTAAGGAGAGAAACGTTTTTAGAAAGGATCTGACTTCCGTGGCAAATAGAGAAAGGGC
CGATATCCTGTTAGACAGCCTGTTGCTTCTGGGCCTCGCCCTTCTGTGCCTTGCTTTCCATCGCCCGGTCTTTTCAGGTC
AACCGTAA

Upstream 100 bases:

>100_bases
GATCTCACCTCCATGGACGCCGGAAAGATGGGCATGGGGACCAAGGAAGTGGGCGACCTGATCAGCCGGTACGTTCTGGA
AAAATAAGGAAAATCAGGGC

Downstream 100 bases:

>100_bases
ACGAAGAAAAAAAAGAAAAACTGAAAGGCCATGGGCGGAAAGCTCATGGCCTTTTTTTATCCAGGAAAGGAGCCTTTATG
GATTCACCAGAGAAAAGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 55; Mature: 54

Protein sequence:

>55_residues
MTSSAFYFKERNVFRKDLTSVANRERADILLDSLLLLGLALLCLAFHRPVFSGQP

Sequences:

>Translated_55_residues
MTSSAFYFKERNVFRKDLTSVANRERADILLDSLLLLGLALLCLAFHRPVFSGQP
>Mature_54_residues
TSSAFYFKERNVFRKDLTSVANRERADILLDSLLLLGLALLCLAFHRPVFSGQP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6242; Mature: 6111

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSSAFYFKERNVFRKDLTSVANRERADILLDSLLLLGLALLCLAFHRPVFSGQP
CCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TSSAFYFKERNVFRKDLTSVANRERADILLDSLLLLGLALLCLAFHRPVFSGQP
CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA