| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85860359
Identifier: 85860359
GI number: 85860359
Start: 2538157
End: 2538429
Strand: Direct
Name: 85860359
Synonym: SYN_01202
Alternate gene names: NA
Gene position: 2538157-2538429 (Clockwise)
Preceding gene: 85860356
Following gene: 85860360
Centisome position: 79.83
GC content: 51.28
Gene sequence:
>273_bases ATGGAATTGGAATCAGAAAGGAGCGAGGCACGACGGATAAGACGTCTCAGGATTGCTGCCCGGACGAGTGCGCCCATTGC CACGAATGCGGGCGGCTGGTGGAATTCACCAAAGCCCATCCGGGGCACTCAAGTGCCTCGACTTAAGTTTTTCTCAGGGA ATCAAAAGATCGTCATACAAAATCATGTCATTACGGAGCATTCCATGAAACCTGCATTGATCATTTCTGATATGCTGGAG GACTTTATTCGACAGGACGGCCCCCTCCCGTAG
Upstream 100 bases:
>100_bases TGCATAATCCCGGAGGTCTTGGCGGGCTGGAAACGATGCAGGCTCGCAGAGGCGCCTGTCGAATAGCCGCTGGCGGAAAC GAAACATTGTTCGTTTTGAT
Downstream 100 bases:
>100_bases GCGAAGAAGGCCTCAGGATCATTCCCAATCTTCAGGCGGCGATCAGGTTCTGCCGTCAGAAGGCCATCCCTGTTGTTTAT GCCAACGATGCGCTGATGCC
Product: cytoplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 90; Mature: 90
Protein sequence:
>90_residues MELESERSEARRIRRLRIAARTSAPIATNAGGWWNSPKPIRGTQVPRLKFFSGNQKIVIQNHVITEHSMKPALIISDMLE DFIRQDGPLP
Sequences:
>Translated_90_residues MELESERSEARRIRRLRIAARTSAPIATNAGGWWNSPKPIRGTQVPRLKFFSGNQKIVIQNHVITEHSMKPALIISDMLE DFIRQDGPLP >Mature_90_residues MELESERSEARRIRRLRIAARTSAPIATNAGGWWNSPKPIRGTQVPRLKFFSGNQKIVIQNHVITEHSMKPALIISDMLE DFIRQDGPLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10248; Mature: 10248
Theoretical pI: Translated: 11.42; Mature: 11.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELESERSEARRIRRLRIAARTSAPIATNAGGWWNSPKPIRGTQVPRLKFFSGNQKIVIQ CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEE NHVITEHSMKPALIISDMLEDFIRQDGPLP CCEECCCCCCCHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MELESERSEARRIRRLRIAARTSAPIATNAGGWWNSPKPIRGTQVPRLKFFSGNQKIVIQ CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEE NHVITEHSMKPALIISDMLEDFIRQDGPLP CCEECCCCCCCHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA