| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85860296
Identifier: 85860296
GI number: 85860296
Start: 2477169
End: 2478296
Strand: Direct
Name: 85860296
Synonym: SYN_03745
Alternate gene names: NA
Gene position: 2477169-2478296 (Clockwise)
Preceding gene: 85860295
Following gene: 85860297
Centisome position: 77.92
GC content: 55.59
Gene sequence:
>1128_bases ATGAAGATCAAATCATTTGAATTCAATCTTCGCGAACTGGGAGGAGCAATGGGGGATTTCGGAACCCTCTTCCCCCTGGC CATCGGCTACATCTATGTCTGCGGCCTCGATCCGGCCGGTTTTCTGGTCATGATGGGACTGGCAAACATTGTCACCGGCC TTGTTTACCGTCTTCCCATGCCCATCGAACCGATGAAGGTGCTGGCTGTGGCAGCCATCGCGCAGAAATGGACTCCCTCC ATGATCTACGCCTCGGGTTTCGGCATGGGTTTGATCTGGCTGCTCTTCGCGGTCACAGGCCTGGTGGAACGGCTGGCCAG ACTGACGCCGCCTTCCGTCATTCGTGGCATTCAGGTGGCGCTGGGACTTATGCTGGCTGTCGAAGCGGCGAAACTGCTGT CTACGGGCTGGTTTCTCGGCATCATTTCCATCCTGATCGTTCTTGCTCTGCGGAAAAATCGTCATGCACCGGCGGCTGTG GTTCTGATGGTTCTGGGAATTGTCGTCATGGCCGTAAAAGGAGAACTCGGAAACATCGCCGCACCGGGTTTCAAGCTTCC ACCTTTTACGACGTTCACCTTTCAGGAGGTCTGGGATACCCTGCTTCTGGCCGGTTTTGCCCAGCTCCCCCTGACCATCA CCAACGCAACCATCGCCACAGCCGCCCTCATCTCAGCCTACTGGCCGAATAAAACGGTTACGGTAAGAAAGCTTTCCTGG AATCAGGGAATCATGAACACGATTCTGCCTTTTCTGGGGGGAATGCCGATGTGCCATGGCGCGGGCGGCTTGGCCGGGCA ATACTATTTCGGGGCGCGCACGGGTGGAGCCAACATTATCGAGGGACTTATCGAAATTTTCCTTGGCCTGTTCCTGTCCG CGTCCATCGCCGGCCTTTTCTCCGTCTTTCCCGGGGCCATTATCGGCGCAATGATGTTCATGGTCGGGATCGAACTCATG AAATTCGCAAGGGATGTAGCCATCGGTAAGGACCTGATTCCTCTGGGGACAACCCTGCTTGTTTCCCTGGCAACAAACAT GGCTTACGGGTTTCTGGCCGGTCTTGCCGTCCATTACCTGTCTCCGCTGTTTTTCAGGAACGGAAGCATCAAAAAGGAGG GGTCGTGA
Upstream 100 bases:
>100_bases CCTTCGGGGTGCCCTTCGCTCTGAAATCCATAGCGATTCTTCCTTTCATCGGGTTTCTTCTCAGCTTGTCTCTAAAATAT CAAAGGACTCCCGACAGAAT
Downstream 100 bases:
>100_bases TGAATGTTTCAAGAAGCAATAGTAAACAGGAAGGTGTCAGGATCTGTAAAGGCAATCTTTCCTGACGCAAATTTTCAACA ATGAACAGGAGAATACCAAG
Product: hypothetical protein
Products: NA
Alternate protein names: Sulfate Permease; Xanthine/Uracil/Vitamin C Permease; MFS Superfamily Sulfate Permease; Sulfate Transporter Family Permease; Sulfate Permease SulP; Sulfate Permease-Like Transporter Mfs Superfamily; Sulfate Permease-Like Transporter MFS Superfamily
Number of amino acids: Translated: 375; Mature: 375
Protein sequence:
>375_residues MKIKSFEFNLRELGGAMGDFGTLFPLAIGYIYVCGLDPAGFLVMMGLANIVTGLVYRLPMPIEPMKVLAVAAIAQKWTPS MIYASGFGMGLIWLLFAVTGLVERLARLTPPSVIRGIQVALGLMLAVEAAKLLSTGWFLGIISILIVLALRKNRHAPAAV VLMVLGIVVMAVKGELGNIAAPGFKLPPFTTFTFQEVWDTLLLAGFAQLPLTITNATIATAALISAYWPNKTVTVRKLSW NQGIMNTILPFLGGMPMCHGAGGLAGQYYFGARTGGANIIEGLIEIFLGLFLSASIAGLFSVFPGAIIGAMMFMVGIELM KFARDVAIGKDLIPLGTTLLVSLATNMAYGFLAGLAVHYLSPLFFRNGSIKKEGS
Sequences:
>Translated_375_residues MKIKSFEFNLRELGGAMGDFGTLFPLAIGYIYVCGLDPAGFLVMMGLANIVTGLVYRLPMPIEPMKVLAVAAIAQKWTPS MIYASGFGMGLIWLLFAVTGLVERLARLTPPSVIRGIQVALGLMLAVEAAKLLSTGWFLGIISILIVLALRKNRHAPAAV VLMVLGIVVMAVKGELGNIAAPGFKLPPFTTFTFQEVWDTLLLAGFAQLPLTITNATIATAALISAYWPNKTVTVRKLSW NQGIMNTILPFLGGMPMCHGAGGLAGQYYFGARTGGANIIEGLIEIFLGLFLSASIAGLFSVFPGAIIGAMMFMVGIELM KFARDVAIGKDLIPLGTTLLVSLATNMAYGFLAGLAVHYLSPLFFRNGSIKKEGS >Mature_375_residues MKIKSFEFNLRELGGAMGDFGTLFPLAIGYIYVCGLDPAGFLVMMGLANIVTGLVYRLPMPIEPMKVLAVAAIAQKWTPS MIYASGFGMGLIWLLFAVTGLVERLARLTPPSVIRGIQVALGLMLAVEAAKLLSTGWFLGIISILIVLALRKNRHAPAAV VLMVLGIVVMAVKGELGNIAAPGFKLPPFTTFTFQEVWDTLLLAGFAQLPLTITNATIATAALISAYWPNKTVTVRKLSW NQGIMNTILPFLGGMPMCHGAGGLAGQYYFGARTGGANIIEGLIEIFLGLFLSASIAGLFSVFPGAIIGAMMFMVGIELM KFARDVAIGKDLIPLGTTLLVSLATNMAYGFLAGLAVHYLSPLFFRNGSIKKEGS
Specific function: Unknown
COG id: COG0659
COG function: function code P; Sulfate permease and related transporters (MFS superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39930; Mature: 39930
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIKSFEFNLRELGGAMGDFGTLFPLAIGYIYVCGLDPAGFLVMMGLANIVTGLVYRLPM CCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC PIEPMKVLAVAAIAQKWTPSMIYASGFGMGLIWLLFAVTGLVERLARLTPPSVIRGIQVA CCCHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH LGLMLAVEAAKLLSTGWFLGIISILIVLALRKNRHAPAAVVLMVLGIVVMAVKGELGNIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCC APGFKLPPFTTFTFQEVWDTLLLAGFAQLPLTITNATIATAALISAYWPNKTVTVRKLSW CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHCCCCEEEEEEECC NQGIMNTILPFLGGMPMCHGAGGLAGQYYFGARTGGANIIEGLIEIFLGLFLSASIAGLF CCCHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH SVFPGAIIGAMMFMVGIELMKFARDVAIGKDLIPLGTTLLVSLATNMAYGFLAGLAVHYL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SPLFFRNGSIKKEGS HHHHHCCCCCCCCCC >Mature Secondary Structure MKIKSFEFNLRELGGAMGDFGTLFPLAIGYIYVCGLDPAGFLVMMGLANIVTGLVYRLPM CCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC PIEPMKVLAVAAIAQKWTPSMIYASGFGMGLIWLLFAVTGLVERLARLTPPSVIRGIQVA CCCHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH LGLMLAVEAAKLLSTGWFLGIISILIVLALRKNRHAPAAVVLMVLGIVVMAVKGELGNIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCC APGFKLPPFTTFTFQEVWDTLLLAGFAQLPLTITNATIATAALISAYWPNKTVTVRKLSW CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHCCCCEEEEEEECC NQGIMNTILPFLGGMPMCHGAGGLAGQYYFGARTGGANIIEGLIEIFLGLFLSASIAGLF CCCHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH SVFPGAIIGAMMFMVGIELMKFARDVAIGKDLIPLGTTLLVSLATNMAYGFLAGLAVHYL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SPLFFRNGSIKKEGS HHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA