Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85860277

Identifier: 85860277

GI number: 85860277

Start: 2458223

End: 2458525

Strand: Direct

Name: 85860277

Synonym: SYN_02517

Alternate gene names: NA

Gene position: 2458223-2458525 (Clockwise)

Preceding gene: 85860276

Following gene: 85860278

Centisome position: 77.32

GC content: 51.49

Gene sequence:

>303_bases
ATGGAAAGCAGGATAACACCAACGAAACGAGAACTCGCGCGATACAAGGCACTCAGTGACGTGGGCCTGACAGCGAATGC
GGTTGCAGTCAGGTTGGGAAGATATCCCAAAACCGTCCGGAAATATCTGCGCTCCGATGTTTACAAAGATCCGGGAATAA
CGGCGATGGTCGATACCATCAAAAGAAAGGAGCTGGCCTATCTGTACTTTCTTGGCGCGAAGCCCCGGAAGCAGCCCAGG
GAACGGCTCGATAAAAGATATATTGCGAACGGAAATGCACCCCGGTCTACGTTTCGATCATGA

Upstream 100 bases:

>100_bases
TCCCTGGTCGATCCTTATTTAAGGTTACGCATGGAGGCACAGGATATCCAGAACAGCGCTGACCGTATTGTGAATACAGA
GATAGAAAGGGGATAAGAAA

Downstream 100 bases:

>100_bases
CCTGAAGCGCGGGTACGCTGTTTTCCCGTAAAGAACTCGAAATTTGGTTTCAGGCATCCATCACCGGGCGAAACGAATAA
AGATCATCTTCAACGCATAT

Product: cytoplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 100; Mature: 100

Protein sequence:

>100_residues
MESRITPTKRELARYKALSDVGLTANAVAVRLGRYPKTVRKYLRSDVYKDPGITAMVDTIKRKELAYLYFLGAKPRKQPR
ERLDKRYIANGNAPRSTFRS

Sequences:

>Translated_100_residues
MESRITPTKRELARYKALSDVGLTANAVAVRLGRYPKTVRKYLRSDVYKDPGITAMVDTIKRKELAYLYFLGAKPRKQPR
ERLDKRYIANGNAPRSTFRS
>Mature_100_residues
MESRITPTKRELARYKALSDVGLTANAVAVRLGRYPKTVRKYLRSDVYKDPGITAMVDTIKRKELAYLYFLGAKPRKQPR
ERLDKRYIANGNAPRSTFRS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11536; Mature: 11536

Theoretical pI: Translated: 11.16; Mature: 11.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESRITPTKRELARYKALSDVGLTANAVAVRLGRYPKTVRKYLRSDVYKDPGITAMVDTI
CCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHH
KRKELAYLYFLGAKPRKQPRERLDKRYIANGNAPRSTFRS
HHHHHHHHEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MESRITPTKRELARYKALSDVGLTANAVAVRLGRYPKTVRKYLRSDVYKDPGITAMVDTI
CCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHH
KRKELAYLYFLGAKPRKQPRERLDKRYIANGNAPRSTFRS
HHHHHHHHEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA