Click here to switch to the map view.

The map label for this gene is 85860276

Identifier: 85860276

GI number: 85860276

Start: 2457883

End: 2458218

Strand: Direct

Name: 85860276

Synonym: SYN_02516

Alternate gene names: NA

Gene position: 2457883-2458218 (Clockwise)

Preceding gene: 85860269

Following gene: 85860277

Centisome position: 77.31

GC content: 46.73

Gene sequence:

>336_bases
TTGGGACACGCAGGAATGACGCTTCATATTCCGGAGGGATTGACCATGAATTACAAAGAATATTTGAAAACGATGATCAG
AAGAAGAGGAACACTGGACATGCCCGAGGATGGATCCTGTTACACGCTTCGCTTCAATGAATCAGACGCCCGGCTCAAGA
ATGCCCATCTCGTTGAAGTGCAGGATGATTTTGTGGTCATCCACCATGATCACCATGGAATGCTCAAAATCCCCCTCTTC
TCCCTGGTCGATCCTTATTTAAGGTTACGCATGGAGGCACAGGATATCCAGAACAGCGCTGACCGTATTGTGAATACAGA
GATAGAAAGGGGATAA

Upstream 100 bases:

>100_bases
ATCCATATCACTCTGTCCCTCTTGAATATGAATGGGTGACGCAAATAAAATAGTCAACAGGAAAGGCGGATAAAGGAGCA
TTCTAAATAGGCTCTTAAAG

Downstream 100 bases:

>100_bases
GAAAATGGAAAGCAGGATAACACCAACGAAACGAGAACTCGCGCGATACAAGGCACTCAGTGACGTGGGCCTGACAGCGA
ATGCGGTTGCAGTCAGGTTG

Product: cytoplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 110

Protein sequence:

>111_residues
MGHAGMTLHIPEGLTMNYKEYLKTMIRRRGTLDMPEDGSCYTLRFNESDARLKNAHLVEVQDDFVVIHHDHHGMLKIPLF
SLVDPYLRLRMEAQDIQNSADRIVNTEIERG

Sequences:

>Translated_111_residues
MGHAGMTLHIPEGLTMNYKEYLKTMIRRRGTLDMPEDGSCYTLRFNESDARLKNAHLVEVQDDFVVIHHDHHGMLKIPLF
SLVDPYLRLRMEAQDIQNSADRIVNTEIERG
>Mature_110_residues
GHAGMTLHIPEGLTMNYKEYLKTMIRRRGTLDMPEDGSCYTLRFNESDARLKNAHLVEVQDDFVVIHHDHHGMLKIPLFS
LVDPYLRLRMEAQDIQNSADRIVNTEIERG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12879; Mature: 12748

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
6.3 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGHAGMTLHIPEGLTMNYKEYLKTMIRRRGTLDMPEDGSCYTLRFNESDARLKNAHLVEV
CCCCCEEEECCCCCEECHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEE
QDDFVVIHHDHHGMLKIPLFSLVDPYLRLRMEAQDIQNSADRIVNTEIERG
CCCEEEEEECCCCEEEECHHHHHCHHHHHEECHHHHHCHHHHHCCCCCCCC
>Mature Secondary Structure 
GHAGMTLHIPEGLTMNYKEYLKTMIRRRGTLDMPEDGSCYTLRFNESDARLKNAHLVEV
CCCCEEEECCCCCEECHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEE
QDDFVVIHHDHHGMLKIPLFSLVDPYLRLRMEAQDIQNSADRIVNTEIERG
CCCEEEEEECCCCEEEECHHHHHCHHHHHEECHHHHHCHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA