Click here to switch to the map view.

The map label for this gene is korC [H]

Identifier: 85860259

GI number: 85860259

Start: 2445782

End: 2446363

Strand: Direct

Name: korC [H]

Synonym: SYN_02500

Alternate gene names: 85860259

Gene position: 2445782-2446363 (Clockwise)

Preceding gene: 85860258

Following gene: 85860260

Centisome position: 76.93

GC content: 54.64

Gene sequence:

>582_bases
ATGAGGTACGATATCAGGCTTTCCGGATCTGGAGGCCAGGGGATCATTGTCATGGGAATTGTGCTCGCCGAAGCGATCGG
CGTTTATGATGGAAAGCATGTGGCCCAGACGCAGAGCTATGGACCGCAGTCGCGCGGCGGCTCCAGCAAAGCCGAAATCG
TCGTCAGCGATGAAGAAATAGACTATCCCGAGGCGATGAAACTGGACCTGCTTCTGGCGATGAATCAGATCTCGTGCGAT
GAGTATTACACGGATTTGAAGCCTGAAGGCTTATTGATCGCCGATTCCACCTTTGTGACCCAATTGCCTGTTTCGCGGGC
TTTTGTCATCCCCTTTACGAGAATCGCCAGGGAAAAGCTCAATCAGGAATCCACGGCAAATATGATCGCCATCGGAACAC
TTCCCATCCTTACCGGAATCGTATCACCGCGGGCTCTTGAAAGGGCAATACGGGAACGACTGCCCGGGGCCGAGGATCTC
AACTTAAAGGCCATGCGCGCGGGCATGGCTGCCGCGCGAAAGGCTGCACGGAAAGCGGCGGGTGCGACGCGACGGATTGC
ATGGGAAAATGAAGATTTATGA

Upstream 100 bases:

>100_bases
CAAATTCACCATCGGGGTGCTTGCTGACCGGGATATGCCTGCTTACGAGGAGGAGTACGAGAAAATCAGAAAGCGAGCCA
GAGAAGCAGAGGAAAAGTAG

Downstream 100 bases:

>100_bases
ATATCAGGTAAAAGAGTTTTTCCGCAGCTTCGGCATACCCACACCCCGGGGTGCTGCAGGAAAGACATCGGATGAAATTG
TCACCGCCGCGCGATCGCTC

Product: pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases subunit gamma

Products: NA

Alternate protein names: 2-ketoglutarate oxidoreductase gamma chain; KOR; 2-oxoglutarate-ferredoxin oxidoreductase subunit gamma [H]

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MRYDIRLSGSGGQGIIVMGIVLAEAIGVYDGKHVAQTQSYGPQSRGGSSKAEIVVSDEEIDYPEAMKLDLLLAMNQISCD
EYYTDLKPEGLLIADSTFVTQLPVSRAFVIPFTRIAREKLNQESTANMIAIGTLPILTGIVSPRALERAIRERLPGAEDL
NLKAMRAGMAAARKAARKAAGATRRIAWENEDL

Sequences:

>Translated_193_residues
MRYDIRLSGSGGQGIIVMGIVLAEAIGVYDGKHVAQTQSYGPQSRGGSSKAEIVVSDEEIDYPEAMKLDLLLAMNQISCD
EYYTDLKPEGLLIADSTFVTQLPVSRAFVIPFTRIAREKLNQESTANMIAIGTLPILTGIVSPRALERAIRERLPGAEDL
NLKAMRAGMAAARKAARKAAGATRRIAWENEDL
>Mature_193_residues
MRYDIRLSGSGGQGIIVMGIVLAEAIGVYDGKHVAQTQSYGPQSRGGSSKAEIVVSDEEIDYPEAMKLDLLLAMNQISCD
EYYTDLKPEGLLIADSTFVTQLPVSRAFVIPFTRIAREKLNQESTANMIAIGTLPILTGIVSPRALERAIRERLPGAEDL
NLKAMRAGMAAARKAARKAAGATRRIAWENEDL

Specific function: Unknown

COG id: COG1014

COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011894
- InterPro:   IPR019752
- InterPro:   IPR002869 [H]

Pfam domain/function: PF01558 POR [H]

EC number: =1.2.7.3 [H]

Molecular weight: Translated: 20951; Mature: 20951

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYDIRLSGSGGQGIIVMGIVLAEAIGVYDGKHVAQTQSYGPQSRGGSSKAEIVVSDEEI
CCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCEEEEECCCCC
DYPEAMKLDLLLAMNQISCDEYYTDLKPEGLLIADSTFVTQLPVSRAFVIPFTRIAREKL
CCCCHHHHHHHHHHHHHCHHHHHHCCCCCCEEEECCCEEECCCCCCEEECHHHHHHHHHH
NQESTANMIAIGTLPILTGIVSPRALERAIRERLPGAEDLNLKAMRAGMAAARKAARKAA
CCCCCCCEEEEHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHC
GATRRIAWENEDL
CCCEEECCCCCCC
>Mature Secondary Structure
MRYDIRLSGSGGQGIIVMGIVLAEAIGVYDGKHVAQTQSYGPQSRGGSSKAEIVVSDEEI
CCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCEEEEECCCCC
DYPEAMKLDLLLAMNQISCDEYYTDLKPEGLLIADSTFVTQLPVSRAFVIPFTRIAREKL
CCCCHHHHHHHHHHHHHCHHHHHHCCCCCCEEEECCCEEECCCCCCEEECHHHHHHHHHH
NQESTANMIAIGTLPILTGIVSPRALERAIRERLPGAEDLNLKAMRAGMAAARKAARKAA
CCCCCCCEEEEHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHC
GATRRIAWENEDL
CCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]