Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85860246

Identifier: 85860246

GI number: 85860246

Start: 2437995

End: 2438321

Strand: Direct

Name: 85860246

Synonym: SYN_03012

Alternate gene names: NA

Gene position: 2437995-2438321 (Clockwise)

Preceding gene: 85860245

Following gene: 85860247

Centisome position: 76.68

GC content: 49.85

Gene sequence:

>327_bases
ATGATTTCTAAAAGAATATGGTGTTCATGCTGTGGGCATGAAGGTCCAAGAGAAATTACAGGGGCAGAACCTGCTGAATC
AAGAGGCGATGCGTTCACATCAGAAGGACATGATCCCTATTCCGCGAAACTTTATTTCCGCTGCCCCCGGTGCAAGGTCG
TCATTACCGTTGATCCAAACGACGCTCTGGGAAGTTACACCATGAACGGCTACCCTTCTCCGACTGAGGCCGCAAAACCG
ACCGGAACACAGAACTTCATGACAATGCTTGGCGGGCTGTACGCGGGACTCGCGGTTTTGATCCTCATTACACAAATATT
CTGCTGA

Upstream 100 bases:

>100_bases
GGCATTATAGCCCACACTGTGGCGATGTGGATTCCTTATTAACAAAATCCAGATGAGCACGAACCGAATGTTTCTTGACC
AAAAAAGGGGGAAGCCTTAA

Downstream 100 bases:

>100_bases
TTTTATTTCTGCAAACCGATTGACCCATCAGAGCTCATATTGAAAAGACCAACATAATTATAAAGGAGAATAATGATGCC
GGAAGGAACAGTTAAATGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MISKRIWCSCCGHEGPREITGAEPAESRGDAFTSEGHDPYSAKLYFRCPRCKVVITVDPNDALGSYTMNGYPSPTEAAKP
TGTQNFMTMLGGLYAGLAVLILITQIFC

Sequences:

>Translated_108_residues
MISKRIWCSCCGHEGPREITGAEPAESRGDAFTSEGHDPYSAKLYFRCPRCKVVITVDPNDALGSYTMNGYPSPTEAAKP
TGTQNFMTMLGGLYAGLAVLILITQIFC
>Mature_108_residues
MISKRIWCSCCGHEGPREITGAEPAESRGDAFTSEGHDPYSAKLYFRCPRCKVVITVDPNDALGSYTMNGYPSPTEAAKP
TGTQNFMTMLGGLYAGLAVLILITQIFC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11699; Mature: 11699

Theoretical pI: Translated: 6.48; Mature: 6.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.6 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
9.3 %Cys+Met (Translated Protein)
5.6 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
9.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISKRIWCSCCGHEGPREITGAEPAESRGDAFTSEGHDPYSAKLYFRCPRCKVVITVDPN
CCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEECCC
DALGSYTMNGYPSPTEAAKPTGTQNFMTMLGGLYAGLAVLILITQIFC
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MISKRIWCSCCGHEGPREITGAEPAESRGDAFTSEGHDPYSAKLYFRCPRCKVVITVDPN
CCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEECCC
DALGSYTMNGYPSPTEAAKPTGTQNFMTMLGGLYAGLAVLILITQIFC
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA