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The map label for this gene is 85860154

Identifier: 85860154

GI number: 85860154

Start: 2359939

End: 2360400

Strand: Direct

Name: 85860154

Synonym: SYN_00784

Alternate gene names: NA

Gene position: 2359939-2360400 (Clockwise)

Preceding gene: 85860153

Following gene: 85860155

Centisome position: 74.23

GC content: 52.6

Gene sequence:

>462_bases
ATGGAGGAGATGCCCATGAATTACATCAAAATCAGTCTGGATGATGAGATCACGGAAACGGCCCGTGAGTTTGAAAAAAC
CATTGACGACATGTTTCACATGATCAATTCAGGCTATTCCGTTTCCCAACGCACCTGGCGGCCCCAGATGGATATCTACG
AATCCCCCGACCGGCTCATTATTTTCGCGGAAATGGCCGGGGTAAAGCGGGAGCATATTCATCTGGAAATCAGCAGTCGG
ACCGTCAAGGTCTATGGAAGACGAACCACCGGTGCCGGAATCGGCAACGCCCGTTACCATCTCGCGGAAATTCCCTTCGG
TTATTTCGAGCGGAGCCTGGTGCTGCCCGCCCCCATAGACACCGACTCCGCGGAAGCGGTTTACGCCGACGGCCTTCTGG
AGATTCGCATGACCAAACTTCCTCTGAGCAAAGTCCATAAAATCATGTTCCAGCATCGTTGA

Upstream 100 bases:

>100_bases
TCAGGACGGTCCATCTTTTTTCAGCGTCTCCCTTCCCCCTTCTTCCACACACTTTGGTCCGCCTGACCCGCATATCCCTG
AACCCTCTAAGGGTTCCCCC

Downstream 100 bases:

>100_bases
CAGGAAAAATTCCCTTAAGGAAACCACATTGCTGTGGAGGTTCCCATGCCGGAAAGCACGATCAACGAGGATTCCAAAAT
CTTCAAGTTGCCTGAAATCC

Product: small heat shock protein

Products: NA

Alternate protein names: Small Heat Shock Protein; Molecular Chaperone; HSP20 Family Protein; Small Heat Shock Protein Hsp; Heat Shock Protein

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MEEMPMNYIKISLDDEITETAREFEKTIDDMFHMINSGYSVSQRTWRPQMDIYESPDRLIIFAEMAGVKREHIHLEISSR
TVKVYGRRTTGAGIGNARYHLAEIPFGYFERSLVLPAPIDTDSAEAVYADGLLEIRMTKLPLSKVHKIMFQHR

Sequences:

>Translated_153_residues
MEEMPMNYIKISLDDEITETAREFEKTIDDMFHMINSGYSVSQRTWRPQMDIYESPDRLIIFAEMAGVKREHIHLEISSR
TVKVYGRRTTGAGIGNARYHLAEIPFGYFERSLVLPAPIDTDSAEAVYADGLLEIRMTKLPLSKVHKIMFQHR
>Mature_153_residues
MEEMPMNYIKISLDDEITETAREFEKTIDDMFHMINSGYSVSQRTWRPQMDIYESPDRLIIFAEMAGVKREHIHLEISSR
TVKVYGRRTTGAGIGNARYHLAEIPFGYFERSLVLPAPIDTDSAEAVYADGLLEIRMTKLPLSKVHKIMFQHR

Specific function: Unknown

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17726; Mature: 17726

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEMPMNYIKISLDDEITETAREFEKTIDDMFHMINSGYSVSQRTWRPQMDIYESPDRLI
CCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEE
IFAEMAGVKREHIHLEISSRTVKVYGRRTTGAGIGNARYHLAEIPFGYFERSLVLPAPID
EEEECCCCCEEEEEEEECCEEEEEEEEECCCCCCCCCEEEEEECCCCHHCCCEECCCCCC
TDSAEAVYADGLLEIRMTKLPLSKVHKIMFQHR
CCCCCEEEECCEEEEEEECCCHHHHHHHHHCCC
>Mature Secondary Structure
MEEMPMNYIKISLDDEITETAREFEKTIDDMFHMINSGYSVSQRTWRPQMDIYESPDRLI
CCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEE
IFAEMAGVKREHIHLEISSRTVKVYGRRTTGAGIGNARYHLAEIPFGYFERSLVLPAPID
EEEECCCCCEEEEEEEECCEEEEEEEEECCCCCCCCCEEEEEECCCCHHCCCEECCCCCC
TDSAEAVYADGLLEIRMTKLPLSKVHKIMFQHR
CCCCCEEEECCEEEEEEECCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA