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The map label for this gene is epsD [H]

Identifier: 85860114

GI number: 85860114

Start: 2321873

End: 2323093

Strand: Direct

Name: epsD [H]

Synonym: SYN_00823

Alternate gene names: 85860114

Gene position: 2321873-2323093 (Clockwise)

Preceding gene: 85860113

Following gene: 85860115

Centisome position: 73.03

GC content: 42.26

Gene sequence:

>1221_bases
TTGAAATTAGGAATTACGATGAGAGTCGCTTTTTTTATCCATTACGCTGAACTTTACGGCGCTAACAGATCGCTGCTTAA
CCTGATTGATGGCCTGAAGTCGTTTGGAGTCGAAGCATTCGTTGTTGCTCCGCACGAAGGAGACATGACGATTGCCCTAC
GCAGGCGTACAGTACCGATTTTAAGAGTACCCTTCCAGTGGTGGTCAACTGAATACACAACAACAAAAAAAGATTTTGCG
AGAAAAATTTTAAAGTATTTTTCATGGCGTAGAGGTGCCATTTCCAGACTGGAAACAAATCTACGCATCACACCGCAGGT
AATTAAACAAATAAAAGATTGGAATATTGATATCCTGTATACAAACTCTTCCGTCATTCCCATAGGAGCCATAGTGGGAA
TGTGGATGATGAAGCCACATGTATGGCACCTCAGGGAATTCGGAACATTGGATTACAGCCTAACCCTTGATTGGCATATG
CCGTTATTCAAATTTTTCTTGCAAAAAGCGGATGCTCAAATATGCGTGTCACAGGCCATACGCTCCTTTTACAGAAATGC
TTTAACTGCTGAGAAAAGCTACGTGGTATACAATGGAGTAGCAACAAAAGAGCAGATTGAAAAAATATATGAGGCGGAAG
GTCGTTCTAATGACACTAAAGGATATTTTGTTTTTGCAATAATCGGCTTAATTCATAAGAATAAGGCACAAGATACTGCC
ATTCGCGCATTAGCCCTTCTTAAAGATTCTTTCCCAATGGCACGTCTCATCATTGCCGGTGGTGATGATAGACAAGGTCT
CGATATTAAGAAACTTCAAAAACTTGCGGCATCCCTCGGAGTCAAGGATCAGGTAACATTTCTAGGTTATGTCACAGATC
CTTATGAAGTCTATTGCCAAGCAGACGCAGTTTTGATGTGTTCGAAACATGAAGCGATGGGAAGGGTTACAGTTGAAGCA
ATGACGGCCGGCAAGCCGGTCATTGGGTTAGACTCCGGGGGCACACCTGAAATTATCAAACATGAAGAAAATGGTCTTCT
TTATAAAGGAGGGGCTGAAAAACTTGCTTATTGCATGCGCCGGTTTGTTGAAAATCCAATGTTGGCCCGTCACCTGGGAG
AAAAAGGCTGGCGTATGGCGAAAGAGAAGTATTCCATTGAAGCATATGCGGGAAGCATTTATGAAATACTCTCGTCCATA
ATGAAGGGCAGTAAAAAATGA

Upstream 100 bases:

>100_bases
TGGTGCCTCACCCATCATGCTACTCGAACACAAATGGACAATCGACAATTAAAAAGCAAAGCATTGCGATTAAAAAAATT
TGGCTCACGTTTAGAGTTTC

Downstream 100 bases:

>100_bases
CGGAATCGTTGAGAGCTAAAAAGGTTTTTCGAAAAGGGGCAGTATGCTAAGCATCATAACCCCAGTGTTCAACGGGATAC
GCTTCATCGAGTTCTGTATT

Product: glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 406; Mature: 406

Protein sequence:

>406_residues
MKLGITMRVAFFIHYAELYGANRSLLNLIDGLKSFGVEAFVVAPHEGDMTIALRRRTVPILRVPFQWWSTEYTTTKKDFA
RKILKYFSWRRGAISRLETNLRITPQVIKQIKDWNIDILYTNSSVIPIGAIVGMWMMKPHVWHLREFGTLDYSLTLDWHM
PLFKFFLQKADAQICVSQAIRSFYRNALTAEKSYVVYNGVATKEQIEKIYEAEGRSNDTKGYFVFAIIGLIHKNKAQDTA
IRALALLKDSFPMARLIIAGGDDRQGLDIKKLQKLAASLGVKDQVTFLGYVTDPYEVYCQADAVLMCSKHEAMGRVTVEA
MTAGKPVIGLDSGGTPEIIKHEENGLLYKGGAEKLAYCMRRFVENPMLARHLGEKGWRMAKEKYSIEAYAGSIYEILSSI
MKGSKK

Sequences:

>Translated_406_residues
MKLGITMRVAFFIHYAELYGANRSLLNLIDGLKSFGVEAFVVAPHEGDMTIALRRRTVPILRVPFQWWSTEYTTTKKDFA
RKILKYFSWRRGAISRLETNLRITPQVIKQIKDWNIDILYTNSSVIPIGAIVGMWMMKPHVWHLREFGTLDYSLTLDWHM
PLFKFFLQKADAQICVSQAIRSFYRNALTAEKSYVVYNGVATKEQIEKIYEAEGRSNDTKGYFVFAIIGLIHKNKAQDTA
IRALALLKDSFPMARLIIAGGDDRQGLDIKKLQKLAASLGVKDQVTFLGYVTDPYEVYCQADAVLMCSKHEAMGRVTVEA
MTAGKPVIGLDSGGTPEIIKHEENGLLYKGGAEKLAYCMRRFVENPMLARHLGEKGWRMAKEKYSIEAYAGSIYEILSSI
MKGSKK
>Mature_406_residues
MKLGITMRVAFFIHYAELYGANRSLLNLIDGLKSFGVEAFVVAPHEGDMTIALRRRTVPILRVPFQWWSTEYTTTKKDFA
RKILKYFSWRRGAISRLETNLRITPQVIKQIKDWNIDILYTNSSVIPIGAIVGMWMMKPHVWHLREFGTLDYSLTLDWHM
PLFKFFLQKADAQICVSQAIRSFYRNALTAEKSYVVYNGVATKEQIEKIYEAEGRSNDTKGYFVFAIIGLIHKNKAQDTA
IRALALLKDSFPMARLIIAGGDDRQGLDIKKLQKLAASLGVKDQVTFLGYVTDPYEVYCQADAVLMCSKHEAMGRVTVEA
MTAGKPVIGLDSGGTPEIIKHEENGLLYKGGAEKLAYCMRRFVENPMLARHLGEKGWRMAKEKYSIEAYAGSIYEILSSI
MKGSKK

Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles. Required for biofilm maintenance [H]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Homo sapiens, GI14861836, Length=190, Percent_Identity=27.3684210526316, Blast_Score=69, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI32564184, Length=191, Percent_Identity=29.3193717277487, Blast_Score=75, Evalue=5e-14,
Organism=Saccharomyces cerevisiae, GI9755344, Length=196, Percent_Identity=27.0408163265306, Blast_Score=68, Evalue=2e-12,
Organism=Drosophila melanogaster, GI21357469, Length=197, Percent_Identity=27.4111675126904, Blast_Score=78, Evalue=9e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 46069; Mature: 46069

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLGITMRVAFFIHYAELYGANRSLLNLIDGLKSFGVEAFVVAPHEGDMTIALRRRTVPI
CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEECCCCCE
LRVPFQWWSTEYTTTKKDFARKILKYFSWRRGAISRLETNLRITPQVIKQIKDWNIDILY
EEECHHHCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHCCCEECHHHHHHHHCCCEEEEE
TNSSVIPIGAIVGMWMMKPHVWHLREFGTLDYSLTLDWHMPLFKFFLQKADAQICVSQAI
ECCCCCHHHHHHHHHHHCCCHHHHHHCCCCEEEEEEECCCHHHHHHHHHCCHHHHHHHHH
RSFYRNALTAEKSYVVYNGVATKEQIEKIYEAEGRSNDTKGYFVFAIIGLIHKNKAQDTA
HHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHCCCCHHHH
IRALALLKDSFPMARLIIAGGDDRQGLDIKKLQKLAASLGVKDQVTFLGYVTDPYEVYCQ
HHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCHHEEEE
ADAVLMCSKHEAMGRVTVEAMTAGKPVIGLDSGGTPEIIKHEENGLLYKGGAEKLAYCMR
CCEEEEECCCCCCCEEEEEEECCCCCEEEECCCCCCHHEEECCCCEEEECCHHHHHHHHH
RFVENPMLARHLGEKGWRMAKEKYSIEAYAGSIYEILSSIMKGSKK
HHHCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKLGITMRVAFFIHYAELYGANRSLLNLIDGLKSFGVEAFVVAPHEGDMTIALRRRTVPI
CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEECCCCCE
LRVPFQWWSTEYTTTKKDFARKILKYFSWRRGAISRLETNLRITPQVIKQIKDWNIDILY
EEECHHHCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHCCCEECHHHHHHHHCCCEEEEE
TNSSVIPIGAIVGMWMMKPHVWHLREFGTLDYSLTLDWHMPLFKFFLQKADAQICVSQAI
ECCCCCHHHHHHHHHHHCCCHHHHHHCCCCEEEEEEECCCHHHHHHHHHCCHHHHHHHHH
RSFYRNALTAEKSYVVYNGVATKEQIEKIYEAEGRSNDTKGYFVFAIIGLIHKNKAQDTA
HHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHCCCCHHHH
IRALALLKDSFPMARLIIAGGDDRQGLDIKKLQKLAASLGVKDQVTFLGYVTDPYEVYCQ
HHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCHHEEEE
ADAVLMCSKHEAMGRVTVEAMTAGKPVIGLDSGGTPEIIKHEENGLLYKGGAEKLAYCMR
CCEEEEECCCCCCCEEEEEEECCCCCEEEECCCCCCHHEEECCCCEEEECCHHHHHHHHH
RFVENPMLARHLGEKGWRMAKEKYSIEAYAGSIYEILSSIMKGSKK
HHHCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377 [H]