| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is suhB [H]
Identifier: 85860102
GI number: 85860102
Start: 2310315
End: 2311145
Strand: Direct
Name: suhB [H]
Synonym: SYN_00928
Alternate gene names: 85860102
Gene position: 2310315-2311145 (Clockwise)
Preceding gene: 85860099
Following gene: 85860105
Centisome position: 72.67
GC content: 54.75
Gene sequence:
>831_bases ATGGTATCAGGACAGCAAGACCTTCAAGAATTTCTGCACAGGAGACTTCACGGAATGAATGCGTTTACCGAATTTGCCGT TTCGACAGCGAAGGAAGCAGGACAGCTTCTCAAAAGCCGGCTGAACACCCCCCATACCATCAATTACAAAGGGGTCATCA ACCTGGTCACGGAAGCGGACAGGATGTCTGAAACCCTCATCCTGGAACGTCTTCAGAAGCGGTTCCCCGACCATTCATTC CTGACGGAAGAATCACCAGCCGGCGACAAAGATCCGGAATGCCGCTGGATCATCGATCCCCTGGACGGAACCACAAACTA CGCCCACGGCTATCCCGTCTTCTGTGTTTCCATTGCGCTGGAACGTAGAAAACGCATCGTTACCGGGGTCGTCTACAATC CCATGATGGATGAACTGTTTTTTGCGGAAGAGGGGCAGGGGGCCTGGCTGAACGGCCAACGGATTTCGGTATCGCACATA TCCGATCTTTCCCGTAGCCTCCTCGCCACGGGATTTCCCTACGACATCCGGGAAAGTGAATTCAACAACCTGAACTATTT CAATTCCCTGGCCAAACAGGCCCAGGCTGTTCGGCGCGCCGGTTCCGCCGCCCTGGATATGGCTTATGTCGCTGCAGGCC GGTTTGACGGCTTCTGGGAATTGAAACTGATGCCCTGGGATACCGCCGCGGCCTCTTTGTTGATCATGGAAGCGGGCGGC ATCGTTTCCGATCTCTCCGGCCTGGAGTTTTCCCCCGGCTCCCCTCATGTGCTGGCGTCCAACGGAAAAATCCATCGGCA ACTGATTGACGCCCTTCAAAAAACACCCTGA
Upstream 100 bases:
>100_bases CCTTTCTCTCCCCCGGCCTTCTTCCTTTCATAAAGGCTTTTCTGATTAACATCAATTCGCAGGCTCCGCAACACAAAGTT ATTCCAATTCCGCATCAGAG
Downstream 100 bases:
>100_bases ATCCCTGATTACCCGATTCAAGCGGCACCATAAGGGAGTGAAGCCCGGTCTGTGCCGCATAAGCCACATTCAAAGACATC CCGTATCACCGCTCTCAGGG
Product: myo-inositol-1(or 4)-monophosphatase
Products: NA
Alternate protein names: I-1-Pase; IMPase; Inositol-1-phosphatase [H]
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues MVSGQQDLQEFLHRRLHGMNAFTEFAVSTAKEAGQLLKSRLNTPHTINYKGVINLVTEADRMSETLILERLQKRFPDHSF LTEESPAGDKDPECRWIIDPLDGTTNYAHGYPVFCVSIALERRKRIVTGVVYNPMMDELFFAEEGQGAWLNGQRISVSHI SDLSRSLLATGFPYDIRESEFNNLNYFNSLAKQAQAVRRAGSAALDMAYVAAGRFDGFWELKLMPWDTAAASLLIMEAGG IVSDLSGLEFSPGSPHVLASNGKIHRQLIDALQKTP
Sequences:
>Translated_276_residues MVSGQQDLQEFLHRRLHGMNAFTEFAVSTAKEAGQLLKSRLNTPHTINYKGVINLVTEADRMSETLILERLQKRFPDHSF LTEESPAGDKDPECRWIIDPLDGTTNYAHGYPVFCVSIALERRKRIVTGVVYNPMMDELFFAEEGQGAWLNGQRISVSHI SDLSRSLLATGFPYDIRESEFNNLNYFNSLAKQAQAVRRAGSAALDMAYVAAGRFDGFWELKLMPWDTAAASLLIMEAGG IVSDLSGLEFSPGSPHVLASNGKIHRQLIDALQKTP >Mature_276_residues MVSGQQDLQEFLHRRLHGMNAFTEFAVSTAKEAGQLLKSRLNTPHTINYKGVINLVTEADRMSETLILERLQKRFPDHSF LTEESPAGDKDPECRWIIDPLDGTTNYAHGYPVFCVSIALERRKRIVTGVVYNPMMDELFFAEEGQGAWLNGQRISVSHI SDLSRSLLATGFPYDIRESEFNNLNYFNSLAKQAQAVRRAGSAALDMAYVAAGRFDGFWELKLMPWDTAAASLLIMEAGG IVSDLSGLEFSPGSPHVLASNGKIHRQLIDALQKTP
Specific function: Unknown
COG id: COG0483
COG function: function code G; Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inositol monophosphatase family [H]
Homologues:
Organism=Homo sapiens, GI5031789, Length=258, Percent_Identity=34.1085271317829, Blast_Score=161, Evalue=7e-40, Organism=Homo sapiens, GI221625487, Length=258, Percent_Identity=34.1085271317829, Blast_Score=160, Evalue=1e-39, Organism=Homo sapiens, GI7657236, Length=258, Percent_Identity=36.8217054263566, Blast_Score=154, Evalue=9e-38, Organism=Homo sapiens, GI221625507, Length=143, Percent_Identity=36.3636363636364, Blast_Score=104, Evalue=1e-22, Organism=Escherichia coli, GI1788882, Length=254, Percent_Identity=42.1259842519685, Blast_Score=207, Evalue=6e-55, Organism=Escherichia coli, GI1790659, Length=97, Percent_Identity=38.1443298969072, Blast_Score=63, Evalue=2e-11, Organism=Caenorhabditis elegans, GI193202570, Length=264, Percent_Identity=35.6060606060606, Blast_Score=159, Evalue=2e-39, Organism=Caenorhabditis elegans, GI193202572, Length=259, Percent_Identity=35.5212355212355, Blast_Score=157, Evalue=7e-39, Organism=Saccharomyces cerevisiae, GI6320493, Length=204, Percent_Identity=37.2549019607843, Blast_Score=132, Evalue=7e-32, Organism=Saccharomyces cerevisiae, GI6321836, Length=237, Percent_Identity=29.957805907173, Blast_Score=107, Evalue=3e-24, Organism=Drosophila melanogaster, GI21357329, Length=245, Percent_Identity=37.1428571428571, Blast_Score=163, Evalue=1e-40, Organism=Drosophila melanogaster, GI24664926, Length=269, Percent_Identity=32.7137546468402, Blast_Score=145, Evalue=3e-35, Organism=Drosophila melanogaster, GI24664922, Length=231, Percent_Identity=34.6320346320346, Blast_Score=142, Evalue=3e-34, Organism=Drosophila melanogaster, GI21357303, Length=249, Percent_Identity=33.7349397590361, Blast_Score=135, Evalue=2e-32, Organism=Drosophila melanogaster, GI21357957, Length=233, Percent_Identity=34.7639484978541, Blast_Score=132, Evalue=2e-31, Organism=Drosophila melanogaster, GI24664918, Length=230, Percent_Identity=35.2173913043478, Blast_Score=126, Evalue=1e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020583 - InterPro: IPR000760 - InterPro: IPR020550 - InterPro: IPR022337 [H]
Pfam domain/function: PF00459 Inositol_P [H]
EC number: =3.1.3.25 [H]
Molecular weight: Translated: 30749; Mature: 30749
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: PS00629 IMP_1 ; PS00630 IMP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSGQQDLQEFLHRRLHGMNAFTEFAVSTAKEAGQLLKSRLNTPHTINYKGVINLVTEAD CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHH RMSETLILERLQKRFPDHSFLTEESPAGDKDPECRWIIDPLDGTTNYAHGYPVFCVSIAL HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHH ERRKRIVTGVVYNPMMDELFFAEEGQGAWLNGQRISVSHISDLSRSLLATGFPYDIRESE HHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCEEEHHHHHHHHHHHHHCCCCCCCCCCC FNNLNYFNSLAKQAQAVRRAGSAALDMAYVAAGRFDGFWELKLMPWDTAAASLLIMEAGG CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEEEECCCHHHHHEEEEECCC IVSDLSGLEFSPGSPHVLASNGKIHRQLIDALQKTP HHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCC >Mature Secondary Structure MVSGQQDLQEFLHRRLHGMNAFTEFAVSTAKEAGQLLKSRLNTPHTINYKGVINLVTEAD CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHH RMSETLILERLQKRFPDHSFLTEESPAGDKDPECRWIIDPLDGTTNYAHGYPVFCVSIAL HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHH ERRKRIVTGVVYNPMMDELFFAEEGQGAWLNGQRISVSHISDLSRSLLATGFPYDIRESE HHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCEEEHHHHHHHHHHHHHCCCCCCCCCCC FNNLNYFNSLAKQAQAVRRAGSAALDMAYVAAGRFDGFWELKLMPWDTAAASLLIMEAGG CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEEEECCCHHHHHEEEEECCC IVSDLSGLEFSPGSPHVLASNGKIHRQLIDALQKTP HHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]