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The map label for this gene is xcpS [H]

Identifier: 85860074

GI number: 85860074

Start: 2283984

End: 2285213

Strand: Direct

Name: xcpS [H]

Synonym: SYN_01550

Alternate gene names: 85860074

Gene position: 2283984-2285213 (Clockwise)

Preceding gene: 85860073

Following gene: 85860075

Centisome position: 71.84

GC content: 55.04

Gene sequence:

>1230_bases
ATGCCTTTTTACGAATATACCGCCAGGAACCGCAGCGGCGAACAGATCAGCGGAACGCTGGAAGCGCCCAGTGCCACCGC
TGCCAGACAGAAATTGCGGGAAGCCTTTATCTTCCCCATGGAGTGCAGGGAGGCCAGGATCGGCGCACAGGCCCAGGAGC
CCCTGTCCCGGAAGCCATTGCCCTTTGTCAAACCGGTGAATCCCGGCGAGCTGTCGGTGACAACCCGACATCTGGCAACC
CTTCTTTCCGCAGGCATGCCCCTTGTGCAGGCTCTGAATATCCTCGTGACGCAAACGGACAACCAGGCCCTGCAATCCAT
CCTTTCGCAGATCCGGAAGGATGTGGTCGAAGGAATCAGTCTTTCCGCCGGCATGTCCTCTTTCCCTCGTGTCTTCTCTT
CCTTTTATATCAGCATGGTCAGAGCGGGGGAGGCTTCCGGAACCTTGCCCGTCGTGCTTGAACGGCTCGCCGATTACAGC
GAAAAACAGCAGGAGTTTGCACGAAAAATCAAGGCCGCTCTCGCTTATCCGATCCTGATGTTTCTTTTCGGCGCACTGAT
CCTTTTTTTTCTCATCACCTTCGTGATTCCAAACATTACGGAGGTTTTTGAAGAGATGAACCAGTCCTTGCCGACGATAA
CAACCCTGCTGATCTCTTTCAGCGGATTTCTCCACGATGCCTGGTGGCTTCTTCTCCTTCTTGCCGCCGCCGTTGCCGGC
CTTGGTCGTTATGCAATTACCCGGACCGATCGGGGAAAGCGTCTATGGAGCATTATGCTTCTCCGTATCCCCTTTTTCGG
TAAAATGAATCGCGAAATGGCGATGGCGCGATTTGCCTCCACCCTGGGGACCCTGCTGCAGAACGGCGTCCCCCTGCTTA
CGGCGCTGGAAATTTCCCGTCACATCGCGAGAAACCTTCTCATCGCCGAGGCCATTGAAAACGCCGGAGTGGAAATCAAG
GAAGGCCAGGGACTTTCCGTCGCCCTTGCCCGCAGCGGTCTGTTCCCGCGGATGGCCACGGAAATGATCGCCATCGGTGA
ACAAAGCGGCCGGCTGGAAGAAATGCTTTCCCGAATCGCCGACAGCTATGAAAAAGAAACGTCTGCCGGCCTGGCCTTTT
TCATGTCCCTGCTGGAACCTTTGATGATCCTGATTATGGGACTTCTCGTCGGATTTGTTGTGATCTCCGTCCTGCTGCCC
ATTTTTGAAATGAACCAGCTCGTGAAATAA

Upstream 100 bases:

>100_bases
AGCGCACGTCGAGGAGCCGACAGCGAAGCCATCGAATGACGCTCTTTGATGTGTAACCGGAACAAAAGATATCAGACGGA
AAGACACAGACCAAAATACC

Downstream 100 bases:

>100_bases
AATTTCCAGACAAATCCCTCATCACATAACGCAACGCAAGGAGTAAGATGATGTATAAAACTAAAAAAAACAACAAAGGG
TTTACCCTGATCGAACTGAT

Product: general secretion pathway protein F

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 409; Mature: 408

Protein sequence:

>409_residues
MPFYEYTARNRSGEQISGTLEAPSATAARQKLREAFIFPMECREARIGAQAQEPLSRKPLPFVKPVNPGELSVTTRHLAT
LLSAGMPLVQALNILVTQTDNQALQSILSQIRKDVVEGISLSAGMSSFPRVFSSFYISMVRAGEASGTLPVVLERLADYS
EKQQEFARKIKAALAYPILMFLFGALILFFLITFVIPNITEVFEEMNQSLPTITTLLISFSGFLHDAWWLLLLLAAAVAG
LGRYAITRTDRGKRLWSIMLLRIPFFGKMNREMAMARFASTLGTLLQNGVPLLTALEISRHIARNLLIAEAIENAGVEIK
EGQGLSVALARSGLFPRMATEMIAIGEQSGRLEEMLSRIADSYEKETSAGLAFFMSLLEPLMILIMGLLVGFVVISVLLP
IFEMNQLVK

Sequences:

>Translated_409_residues
MPFYEYTARNRSGEQISGTLEAPSATAARQKLREAFIFPMECREARIGAQAQEPLSRKPLPFVKPVNPGELSVTTRHLAT
LLSAGMPLVQALNILVTQTDNQALQSILSQIRKDVVEGISLSAGMSSFPRVFSSFYISMVRAGEASGTLPVVLERLADYS
EKQQEFARKIKAALAYPILMFLFGALILFFLITFVIPNITEVFEEMNQSLPTITTLLISFSGFLHDAWWLLLLLAAAVAG
LGRYAITRTDRGKRLWSIMLLRIPFFGKMNREMAMARFASTLGTLLQNGVPLLTALEISRHIARNLLIAEAIENAGVEIK
EGQGLSVALARSGLFPRMATEMIAIGEQSGRLEEMLSRIADSYEKETSAGLAFFMSLLEPLMILIMGLLVGFVVISVLLP
IFEMNQLVK
>Mature_408_residues
PFYEYTARNRSGEQISGTLEAPSATAARQKLREAFIFPMECREARIGAQAQEPLSRKPLPFVKPVNPGELSVTTRHLATL
LSAGMPLVQALNILVTQTDNQALQSILSQIRKDVVEGISLSAGMSSFPRVFSSFYISMVRAGEASGTLPVVLERLADYSE
KQQEFARKIKAALAYPILMFLFGALILFFLITFVIPNITEVFEEMNQSLPTITTLLISFSGFLHDAWWLLLLLAAAVAGL
GRYAITRTDRGKRLWSIMLLRIPFFGKMNREMAMARFASTLGTLLQNGVPLLTALEISRHIARNLLIAEAIENAGVEIKE
GQGLSVALARSGLFPRMATEMIAIGEQSGRLEEMLSRIADSYEKETSAGLAFFMSLLEPLMILIMGLLVGFVVISVLLPI
FEMNQLVK

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins. Required for the translocation of a variety of enzymes across the outer membrane [H]

COG id: COG1459

COG function: function code NU; Type II secretory pathway, component PulF

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP F family [H]

Homologues:

Organism=Escherichia coli, GI1789724, Length=407, Percent_Identity=33.1695331695332, Blast_Score=233, Evalue=2e-62,
Organism=Escherichia coli, GI1786295, Length=361, Percent_Identity=28.2548476454294, Blast_Score=143, Evalue=2e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003004
- InterPro:   IPR011850
- InterPro:   IPR018076
- InterPro:   IPR001992 [H]

Pfam domain/function: PF00482 GSPII_F [H]

EC number: NA

Molecular weight: Translated: 45169; Mature: 45038

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: PS00874 T2SP_F

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFYEYTARNRSGEQISGTLEAPSATAARQKLREAFIFPMECREARIGAQAQEPLSRKPL
CCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCHHCCCCCCCC
PFVKPVNPGELSVTTRHLATLLSAGMPLVQALNILVTQTDNQALQSILSQIRKDVVEGIS
CCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
LSAGMSSFPRVFSSFYISMVRAGEASGTLPVVLERLADYSEKQQEFARKIKAALAYPILM
HHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLFGALILFFLITFVIPNITEVFEEMNQSLPTITTLLISFSGFLHDAWWLLLLLAAAVAG
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGRYAITRTDRGKRLWSIMLLRIPFFGKMNREMAMARFASTLGTLLQNGVPLLTALEISR
HHHHHEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
HIARNLLIAEAIENAGVEIKEGQGLSVALARSGLFPRMATEMIAIGEQSGRLEEMLSRIA
HHHHHHHHHHHHHHCCCEEECCCCCEEHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHH
DSYEKETSAGLAFFMSLLEPLMILIMGLLVGFVVISVLLPIFEMNQLVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PFYEYTARNRSGEQISGTLEAPSATAARQKLREAFIFPMECREARIGAQAQEPLSRKPL
CCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCHHCCCCCCCC
PFVKPVNPGELSVTTRHLATLLSAGMPLVQALNILVTQTDNQALQSILSQIRKDVVEGIS
CCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
LSAGMSSFPRVFSSFYISMVRAGEASGTLPVVLERLADYSEKQQEFARKIKAALAYPILM
HHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLFGALILFFLITFVIPNITEVFEEMNQSLPTITTLLISFSGFLHDAWWLLLLLAAAVAG
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGRYAITRTDRGKRLWSIMLLRIPFFGKMNREMAMARFASTLGTLLQNGVPLLTALEISR
HHHHHEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
HIARNLLIAEAIENAGVEIKEGQGLSVALARSGLFPRMATEMIAIGEQSGRLEEMLSRIA
HHHHHHHHHHHHHHCCCEEECCCCCEEHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHH
DSYEKETSAGLAFFMSLLEPLMILIMGLLVGFVVISVLLPIFEMNQLVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1588814; 10984043 [H]