Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

Click here to switch to the map view.

The map label for this gene is 85860045

Identifier: 85860045

GI number: 85860045

Start: 2257206

End: 2257391

Strand: Direct

Name: 85860045

Synonym: SYN_00040

Alternate gene names: NA

Gene position: 2257206-2257391 (Clockwise)

Preceding gene: 85860044

Following gene: 85860046

Centisome position: 71.0

GC content: 50.54

Gene sequence:

>186_bases
ATGAAGTTTTTTCTCTGTGTGCTCGGCATGGTCTTTATTGTCGAAGGACTGCCCTACGTCGCCTTTCCCGGAAAAATCAA
ATCCTGCCTCTTAAAGCTTGTCACCCTGCCGGATTCCACATTACAGGCAATGGGCCTGTTCGCCATGCTGACCGGCGTTC
TTCTCGTTTACTTTGGGAGAGGCTGA

Upstream 100 bases:

>100_bases
AAACTGAAAGAACGGGGGAAAACTCCCGCGGATGCATCACTGGAAGAGATGGATAAGTTATGGAACGAAGCCAAAACAGC
GTCAAAGGAATAAACCCGTC

Downstream 100 bases:

>100_bases
AATAAGTTCATTGACTTTACACATCATTTCTGATTATCAGGACCGCAACGCCGGCGGCATGTCCCGGAACAGCGGGCTGA
CCGTTTGAATTAAAGGAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 61; Mature: 61

Protein sequence:

>61_residues
MKFFLCVLGMVFIVEGLPYVAFPGKIKSCLLKLVTLPDSTLQAMGLFAMLTGVLLVYFGRG

Sequences:

>Translated_61_residues
MKFFLCVLGMVFIVEGLPYVAFPGKIKSCLLKLVTLPDSTLQAMGLFAMLTGVLLVYFGRG
>Mature_61_residues
MKFFLCVLGMVFIVEGLPYVAFPGKIKSCLLKLVTLPDSTLQAMGLFAMLTGVLLVYFGRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6659; Mature: 6659

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
6.6 %Met     (Translated Protein)
9.8 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
6.6 %Met     (Mature Protein)
9.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFFLCVLGMVFIVEGLPYVAFPGKIKSCLLKLVTLPDSTLQAMGLFAMLTGVLLVYFGR
CHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC
G
C
>Mature Secondary Structure
MKFFLCVLGMVFIVEGLPYVAFPGKIKSCLLKLVTLPDSTLQAMGLFAMLTGVLLVYFGR
CHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC
G
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA